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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0436200 |
Transcript ID | LotjaGi1g1v0436200.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Catalase; TAIR: AT4G35090.1 catalase 2; Swiss-Prot: sp|O48561|CATA4_SOYBN Catalase-4; TrEMBL-Plants: tr|A0PG71|A0PG71_LOTJA Catalase; Found in the gene: LotjaGi1g1v0436200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:93052075..93056442) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATCCCTACAAGGTAAGCTCCCATCGCTCTTCTCTCATCGCTCTCTGTATCTGATTTTGCATTTCATCGATTCCGTT CAACTCTATCTGTTTTTTTTTATAGATTTTTTTTGTTATCGTTGAAATTGTGTGTGTTTGAATTTTGAATTTGAATCTGA TGAATCACGGTGATTTGAAATCTGAGCTTGATGGAGTTGCAATTGCGGTGTGGATCTATAACGAAACCGTGTTTGCTGAC TAGTTTTGTTTTTTATTTTGTGTGTGATGATGATGCAGCACCGGCCATCTAGCGCCTTCAACTCTCCCTTCTGGACAACC AATTCCGGTGCTCCTGTATGGAACAACAACAACTCTATGACTGTTGGAGTTAGAGGTATATATCATCTTAACCATCTTTC TCTAATTCCAGGGTCTTGGTTGTGTAGGGAAGGATTTGAACTGTGATGATGTTGTTCTACTTTCTATTGGGATGAGCTTG CTATTTAACGTAATTTGATATGAATTTGGAGGGATATCATTTTGTTAATCAGCTATCACTGTTGTTAATTATTATAACCT GCTGAATGTTCAGATTGTAAAACCAAGCGGCACATTTATATTTTGTTGCTTCACTCATATTAGAGAAAAATATATATGTT CATGCATACTTTGGTCTTTTCTTCCATTTATCTATGATAAGCAGTGTTGTGCGGATACCGCGGTATAGCATAGCGCCCTT AGCGTTCTAAGGGCTCATTGCTACCGTCTGCGGTAACTGTTGTTTGATGCTATTTTCTGCTCTAAGGGCTAGACATAACA GATTTTTGTTTTTCCACGATCCGCGATTAACAAACTGGTGATAAGCAGAAAATAAAAACCCTTTTCTGAGCTTGTGTGAG AGAGGAGTATCTTGGTCAATTTGGTTTCCTTTTGTTGTTACCTTGGATTTTTTTGGTGCTGGAGGGGAGGGGCTTTTCTG TCTGTCTCTTGTAAAGTTCAGAGTGAGTGGGTGAATACTATTTAATCAGAAGTTTTATATTATTTTACCTCCTTTTGGCA GGTCCTATTCTCCTTGAGGATTATCATCTTGTGGAAAAGCTTGCAAACTTTGATAGGGAAAGGATCCCAGAACGTGTTGT CCATGCTAGGGGAGCTAGTGCAAAGGGTTTCTTTGAAGTCACACATGATGTTTCTCACCTGACATGTGCAGATTTCCTTC GAGCCCCTGGAGTTCAGACACCTATCATTCTCCGTTTCTCGACTGTCATTCATGAGCGTGGTAGCCCTGAAACCTTGAGG GATCCTCGTGGTTTTGCTGTGAAGTTTTACACCAGAGAGGTAGACATTTATAACTACATAGCATTAGCTTCTGGTGACTG AGTACAATTTCTGTTTTATTCTGTTTTAGTTGCTGAAATGCTGGCTTTTATTTTTCTAGTTTCAACACAAACCATACAAG TCTAAAATTCCTAATTCCTATTACAATTTAACTCCAAATATAGCATGTACAGCAAACAATTTTGTCTAGATATTGAGTTA TAGCCTTATAGGATTACCTGGGAAGGATGAAGAAGATACATCCACTATTTGGTTGAGTCTAGCACATTCTAGTGAGGGAG AGAAGCTACCTCATTCCACAACAGTTTCTCTGTGTAAATATAATATTATGGACTATATGGACTAATCTCTCATCATAGTA AGCTCATACACATAACCAATAATATTGATTACTTAAGTTGGTCTGAACAAAATCAACTATATGTTTTAATTTGACATCTT GTTAATCTGGATTTTATAAATGTTATATGAATTATACTAGCTCATATAACAAATTTAACAATTCAGACCTCTGTCACTGT TTCTTGACTTCCATTCATGAGCACGGTATCCCTGAAACCTTGAGGACCTTTGACGTTTTTATCTGAAGTTTTGCACCAGA GAGATGAAGATTTGTGAGGCATATAGCATAATTTAAAATTATCTTCCTGTGACTGAATACAGTTACTGACTTACTGTATT AGTTTAAAGTTGTCTTTTATCTCTTCTAAAGTGGTTCCCACTGTAACTGAGGATGCTCATTAAGTTGCTGAAATGTTAAT AATTTATTTAAAAAAAAAGAGGTGATTATGGTAGTGGTTGCAGTCTAGTGCTGTACATGATTCCCGTTTTTACATTGTGA ACACAGGGTAACTTTGACCTTGTGGGAAACAACTTCCCTGTCTTCTTCGTACGTGATGGCATGAAATTTCCAGATATGGT CCATGCTCTGAAGCCCAATCCCAAGTCTCACATCCAGGAGAATTGGAGAATCCTTGACTTCTTCTCCCACTTTCCAGAAA GCCTTCATATGTTCACCTTTCTATTTGATGATGTGGGTGTTCCACAAGATTATAGGCACATGGATGGTTTTGGAGTTAAT ACATATACCCTGATCAACAAGGCTGGGAAAGTAGTGTACGTGAAATTTCACTGGAAGCCCACATGTGGTGTTAAGTGTCT ATTGGAGGAAGAGGCCATTAAGGTGGGAGGATCCAACCACAGCCATGCCACTCAAGACCTTTATGAGTCAATTGCTGCTG GTAACTATCCTGAGTGGAAACTGTTCATTCAAACCATAGATCCTGATCATGAAGACAGATTTGATTTTGACCCACTTGAT GTAACTAAGACTTGGCCTGAGGACATTATACCCCTGCAGCCCGTTGGTCGCATGGTCTTGAATAAGAACATAGATAATTT CTTTGCTGAGAATGAACAACTTGCATTTTGCCCTGCCATTGTGGTACCTGGTATATCTTACTCAGATGATAAGATGCTTC AAACCAGGATTTTCTCTTATGCTGATTCACAGAGGCACAGACTTGGACCAAATTATCTGCAACTTCCTGCCAATGCTCCC AAGTGTGCTCACCACAACAATCACCATGAGGGTTTCATGAATTTCATGCACAGGGATGAAGAGGTAAATCAAAGTTTTCA TTCTTTTATTTTCATGTTGATGTTTTGTATAATAAGCTGGTTGTCATGATAACTACCTAGTGCTGTTGAATTATTTATAC ACATGCTGACTTGGTCTTAATCCTGAGTATGGAATTGCATGCTATACTCTAGTTGGAACTTTCTATTTAGCAATGTACTT TAGTTGGAACTTGGAAATATTTTTTTCCTTTTGACTGAGTGCTGCCTATTTATAGGTCAATTACTTCCCTTCGAGGTATG ATCCTGTTCGACATGCAGAAAGGTACCCCATTCCTCCTGCAATCTGCACTGGAAGCCGCGAACGGGTTAGTTCTGTTGAA TAGCTTAATATGAAAATGCTTAATATAGTGTGACTAAATCTTCCAGCCCTCAGCTTCAATTTAGATTGCATTACTTCATT TCAATGGTTATTTGTCTCAGAAACCTCTGCATTTTAGAATTCTAAACAAATTTTCTTGAAGATTCAATGAGAGCATTAGA TAAAACATATATTTATTGATGATGGGTAATTGGTGTTTTAAAACTTCTGCCATCATAGTAAACTCCAACCATTTTTGCAG AGGCTCCCCTTCTTAAAAGCATATCTTTCTTTGACATTCTTTTCTAATCTATTTAGTAAGATAAAAAAATTAAGCAAGTA CAGTTGAAAGACGTTGTCCCGCAATTAGTAAAACATTCTTTTCTAATCTATTTAATGAGAGTATTAGATAAAACATACAT TTATTGACATGATCTATACGGGAGCAAAGACATTGTCCCGCTACATCAGTTAAATATTTCCTAGTTGTTAATGAAGTTAG GCAGCATTTAGTACAAAGTTTAAGTAGTTATAATTTTTAACATCAATTTTGGATAGAAGAGATAGATTCATCATTAAATC GGTTATAAAACAAATGTATAAGATTTTAAAAAACAGTAAATAGCAGAAAAATATATGAAATGCTGCCTGTATTAGGGAAG TAATGTGTCAATGTCTCTTCTCTAAATGCAGTGTGCAATTGAGAAGGAGAACAACTTCAAGCAGCCTGGAGAGAGATACC GATCTTTTGCGCCTGACAGGTTCCTTTATGAACTACTGATATGATCAATATGAATATGTATGGGATGTCTAACGTTGGTT CTCTCTTCTGTTTCTTGACTTATTTGCAGGCAAGATAGATTTGTCCGCCGATGGGTTGATGCTTTATCTGACCCACGTGT CACCCATGAAATCCGCTCCACCTGGATATCATACTGGTCTCAGGTAAGATTTGGACATGCTATTTTATCACTACAAGAAC TATAGTATCTAGTGTAAATGAATCTGCTCTTGTGTGCTAATATGTTCTTTGTTGGCGTTGCTACGCAGGCTGATCGTTCT CTTGGGCAAAAGATAGCATCTCATTTGAACTTGAGGCCAAGCATTTAA
CDS sequence (LotjaGi1g1v0436200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCCCTACAAGCACCGGCCATCTAGCGCCTTCAACTCTCCCTTCTGGACAACCAATTCCGGTGCTCCTGTATGGAA CAACAACAACTCTATGACTGTTGGAGTTAGAGGTCCTATTCTCCTTGAGGATTATCATCTTGTGGAAAAGCTTGCAAACT TTGATAGGGAAAGGATCCCAGAACGTGTTGTCCATGCTAGGGGAGCTAGTGCAAAGGGTTTCTTTGAAGTCACACATGAT GTTTCTCACCTGACATGTGCAGATTTCCTTCGAGCCCCTGGAGTTCAGACACCTATCATTCTCCGTTTCTCGACTGTCAT TCATGAGCGTGGTAGCCCTGAAACCTTGAGGGATCCTCGTGGTTTTGCTGTGAAGTTTTACACCAGAGAGGGTAACTTTG ACCTTGTGGGAAACAACTTCCCTGTCTTCTTCGTACGTGATGGCATGAAATTTCCAGATATGGTCCATGCTCTGAAGCCC AATCCCAAGTCTCACATCCAGGAGAATTGGAGAATCCTTGACTTCTTCTCCCACTTTCCAGAAAGCCTTCATATGTTCAC CTTTCTATTTGATGATGTGGGTGTTCCACAAGATTATAGGCACATGGATGGTTTTGGAGTTAATACATATACCCTGATCA ACAAGGCTGGGAAAGTAGTGTACGTGAAATTTCACTGGAAGCCCACATGTGGTGTTAAGTGTCTATTGGAGGAAGAGGCC ATTAAGGTGGGAGGATCCAACCACAGCCATGCCACTCAAGACCTTTATGAGTCAATTGCTGCTGGTAACTATCCTGAGTG GAAACTGTTCATTCAAACCATAGATCCTGATCATGAAGACAGATTTGATTTTGACCCACTTGATGTAACTAAGACTTGGC CTGAGGACATTATACCCCTGCAGCCCGTTGGTCGCATGGTCTTGAATAAGAACATAGATAATTTCTTTGCTGAGAATGAA CAACTTGCATTTTGCCCTGCCATTGTGGTACCTGGTATATCTTACTCAGATGATAAGATGCTTCAAACCAGGATTTTCTC TTATGCTGATTCACAGAGGCACAGACTTGGACCAAATTATCTGCAACTTCCTGCCAATGCTCCCAAGTGTGCTCACCACA ACAATCACCATGAGGGTTTCATGAATTTCATGCACAGGGATGAAGAGGTCAATTACTTCCCTTCGAGGTATGATCCTGTT CGACATGCAGAAAGGTACCCCATTCCTCCTGCAATCTGCACTGGAAGCCGCGAACGGTGTGCAATTGAGAAGGAGAACAA CTTCAAGCAGCCTGGAGAGAGATACCGATCTTTTGCGCCTGACAGGCAAGATAGATTTGTCCGCCGATGGGTTGATGCTT TATCTGACCCACGTGTCACCCATGAAATCCGCTCCACCTGGATATCATACTGGTCTCAGGCTGATCGTTCTCTTGGGCAA AAGATAGCATCTCATTTGAACTTGAGGCCAAGCATTTAA
Protein sequence (LotjaGi1g1v0436200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDPYKHRPSSAFNSPFWTTNSGAPVWNNNNSMTVGVRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD VSHLTCADFLRAPGVQTPIILRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKP NPKSHIQENWRILDFFSHFPESLHMFTFLFDDVGVPQDYRHMDGFGVNTYTLINKAGKVVYVKFHWKPTCGVKCLLEEEA IKVGGSNHSHATQDLYESIAAGNYPEWKLFIQTIDPDHEDRFDFDPLDVTKTWPEDIIPLQPVGRMVLNKNIDNFFAENE QLAFCPAIVVPGISYSDDKMLQTRIFSYADSQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDPV RHAERYPIPPAICTGSRERCAIEKENNFKQPGERYRSFAPDRQDRFVRRWVDALSDPRVTHEIRSTWISYWSQADRSLGQ KIASHLNLRPSI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 492 | 492 | 0.0 | – | |
PANTHER | 1 | 492 | 492 | 0.0 | ||
PIRSF | 7 | 491 | 485 | 6.0E-180 | ||
Gene3D | 12 | 491 | 480 | 2.7E-209 | ||
SUPERFAMILY | 13 | 489 | 477 | 9.03E-208 | ||
ProSiteProfiles | 14 | 492 | 479 | 75.106 | ||
CDD | 16 | 484 | 469 | 0.0 | – | |
SMART | 18 | 401 | 384 | 3.9E-247 | ||
Pfam | 18 | 398 | 381 | 1.4E-174 | ||
PRINTS | 31 | 54 | 24 | 1.3E-80 | ||
ProSitePatterns | 54 | 70 | 17 | - | ||
PRINTS | 94 | 112 | 19 | 1.3E-80 | ||
PRINTS | 115 | 132 | 18 | 1.3E-80 | ||
PRINTS | 134 | 152 | 19 | 1.3E-80 | ||
PRINTS | 299 | 326 | 28 | 1.3E-80 | ||
PRINTS | 331 | 357 | 27 | 1.3E-80 | ||
ProSitePatterns | 344 | 352 | 9 | - | ||
Pfam | 423 | 486 | 64 | 3.4E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Catalase activity | Catalysis of the reaction: 2 hydrogen peroxide = O2 + 2 H2O. | ||
Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0436200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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