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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0472300 |
| Transcript ID | LotjaGi1g1v0472300.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bifunctional protein FolD; TAIR: AT4G00620.1 Amino acid dehydrogenase family protein; Swiss-Prot: sp|O65271|FOLD4_ARATH Bifunctional protein FolD 4, chloroplastic; TrEMBL-Plants: tr|A0A0B2R716|A0A0B2R716_GLYSO Bifunctional protein FolD; Found in the gene: LotjaGi1g1v0472300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:98276618..98278166) extracted from Lotus japonicus Gifu genome v1.2.
CTTGAGAGGTTCATTTCTTCTTTTAATCAATAGTGAATTATTGTCATTACTTCATTTACTTGTAACTTTATATCGTAGGT TCTTGAGTTAACTATGCCCATTTTTTCAGTGCCCACATATGTAATTCATATTCATGCACATGCCAATGTTTCTTTGCTCT GCGTTCTGTTGACTGAACATGGATTTGCTAAACTATGTTATCTTATGACTTTATGTACAGCTGCTATGGGTACCGAGGCT TCTGCAAAGGTGATTGATGGAAAATTAGTGGCAAAGCAAATCAGAGATGAGATAACAGCTGAAGTCTCTAGGATGAAAGA AGCCATTGGTGTGGTTCCAGGGTTAGCTGTAATCCTCGTTGGAGATAGGAAGGACTCTGCAACTTATGTGCGTAACAAGC AGAAGGCTTGTGAAGCTGCTGGAATAAATTCTTTGGAAGCATTTTTGCCAGAAGATTCCACTGAAGAAGAAGTTTTGAAT TATATTTCAGGCTACAATGAAGATCCTTCAGTTCATGGCATTCTTGTTCAATTACCTTTACCTTCTGTATGCTTCTAGAT CTCTAACTTTATTTTCTTTTCAGGGTAAAGTATTATACATTAATAACTTGTTCTCATAGCTAAGTTTACTGTTACGTTGA CTATAACTATATAAGTAACTTAATTTTTTTCATATGGAAGTTTAGTTAATTTTCCTTGCCATTGTGACAGCATATGAATG AGCAGAACATCTTGAATGCTATTACAATTGAGAAGGATGTAGATGGTTTTCATCCATTGAATATCGGTCGTCTTGCAATG CGTGATAGAGAACCCCTGTTCGTTCCCTGTACACCAAAGGGATGCATAGAGTTACTCCGCAGATATGGTGTTTCTATCAA GGGAACGAGGGCTGTCGTGATTGGTCGGAGCAATATTGTAGGAATGCCAGCCGCTCTCTTGCTGCAAGTAATATCTCAAT GGCTTTAGTTAACAGTGAAATTTGGTTTTACTTCAAAGTGATTGTTTGCTCCTTTCTTTTTTGCATCTATGTTTCTACTT CTTTATATATCTCTTATGTGACTAGAGGGAAGATGCTACTGTCAGTGTCGTCCATTCAAAAACCCTAAACCCTGAAGAGA TCATAAGACAAGCAGATATTGTCATCTCGGCTGCTGGGCAACCACACATGGTTAGGGGAAGCTGGATAAAACCTGGTGCT GTCATTATCGACGTTGGAATCAACCCTGTAGAGGTGAATTACTTTTTTCGAGATCTCGTTGATAGTATGCTAGGGGTTTC TCTTGGTTATGTTTAGAGGAATAAATTCATAGTTAATACTTAAATTTCAATGTGAATGGTGTTTACTTAACCAATGCATA TTTGAGTGTTTGTAACAGGATCCAAATAGCACTCGAGGTTATAGATTGATCGGAGATGTTTGCTATGAAGAAGCCATAAA AGTTGCCTCGGCTGTGACACCAGTGCCTGGAGGAGTAGGTCCAATGACCATAGCAATGCTTCTCCAAAATACTCTTAACT CTGCAAAGAGGATCCACAAGTTTGAATAA
CDS sequence (LotjaGi1g1v0472300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCCATTTTTTCAGTGCCCACATATGTAATTCATATTCATGCACATGCCAATGTTTCTTTGCTCTGCGTTCTGTTGAC TGAACATGGATTTGCTAAACTATGTTATCTTATGACTTTATGTACAGCTGCTATGGGTACCGAGGCTTCTGCAAAGGTGA TTGATGGAAAATTAGTGGCAAAGCAAATCAGAGATGAGATAACAGCTGAAGTCTCTAGGATGAAAGAAGCCATTGGTGTG GTTCCAGGGTTAGCTGTAATCCTCGTTGGAGATAGGAAGGACTCTGCAACTTATGTGCGTAACAAGCAGAAGGCTTGTGA AGCTGCTGGAATAAATTCTTTGGAAGCATTTTTGCCAGAAGATTCCACTGAAGAAGAAGTTTTGAATTATATTTCAGGCT ACAATGAAGATCCTTCAGTTCATGGCATTCTTGTTCAATTACCTTTACCTTCTCATATGAATGAGCAGAACATCTTGAAT GCTATTACAATTGAGAAGGATGTAGATGGTTTTCATCCATTGAATATCGGTCGTCTTGCAATGCGTGATAGAGAACCCCT GTTCGTTCCCTGTACACCAAAGGGATGCATAGAGTTACTCCGCAGATATGGTGTTTCTATCAAGGGAACGAGGGCTGTCG TGATTGGTCGGAGCAATATTGTAGGAATGCCAGCCGCTCTCTTGCTGCAAAGGGAAGATGCTACTGTCAGTGTCGTCCAT TCAAAAACCCTAAACCCTGAAGAGATCATAAGACAAGCAGATATTGTCATCTCGGCTGCTGGGCAACCACACATGGTTAG GGGAAGCTGGATAAAACCTGGTGCTGTCATTATCGACGTTGGAATCAACCCTGTAGAGGATCCAAATAGCACTCGAGGTT ATAGATTGATCGGAGATGTTTGCTATGAAGAAGCCATAAAAGTTGCCTCGGCTGTGACACCAGTGCCTGGAGGAGTAGGT CCAATGACCATAGCAATGCTTCTCCAAAATACTCTTAACTCTGCAAAGAGGATCCACAAGTTTGAATAA
Protein sequence (LotjaGi1g1v0472300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPIFSVPTYVIHIHAHANVSLLCVLLTEHGFAKLCYLMTLCTAAMGTEASAKVIDGKLVAKQIRDEITAEVSRMKEAIGV VPGLAVILVGDRKDSATYVRNKQKACEAAGINSLEAFLPEDSTEEEVLNYISGYNEDPSVHGILVQLPLPSHMNEQNILN AITIEKDVDGFHPLNIGRLAMRDREPLFVPCTPKGCIELLRRYGVSIKGTRAVVIGRSNIVGMPAALLLQREDATVSVVH SKTLNPEEIIRQADIVISAAGQPHMVRGSWIKPGAVIIDVGINPVEDPNSTRGYRLIGDVCYEEAIKVASAVTPVPGGVG PMTIAMLLQNTLNSAKRIHKFE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 35 | 342 | 308 | 1.0E-186 | ||
| PANTHER | 35 | 342 | 308 | 1.0E-186 | – | |
| SUPERFAMILY | 51 | 170 | 120 | 1.92E-41 | – | |
| Hamap | 51 | 339 | 289 | 37.937 | ||
| Pfam | 53 | 169 | 117 | 1.5E-41 | ||
| Gene3D | 54 | 315 | 262 | 3.2E-111 | – | |
| Gene3D | 56 | 332 | 277 | 3.2E-111 | – | |
| PRINTS | 82 | 104 | 23 | 6.9E-83 | ||
| PRINTS | 123 | 150 | 28 | 6.9E-83 | ||
| ProSitePatterns | 124 | 149 | 26 | - | ||
| PRINTS | 158 | 179 | 22 | 6.9E-83 | ||
| CDD | 164 | 336 | 173 | 2.62655E-96 | ||
| SUPERFAMILY | 171 | 336 | 166 | 1.14E-54 | ||
| Pfam | 172 | 337 | 166 | 1.8E-67 | ||
| PRINTS | 205 | 225 | 21 | 6.9E-83 | ||
| PRINTS | 254 | 283 | 30 | 6.9E-83 | ||
| PRINTS | 295 | 311 | 17 | 6.9E-83 | ||
| PRINTS | 312 | 330 | 19 | 6.9E-83 | ||
| ProSitePatterns | 316 | 324 | 9 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Methylenetetrahydrofolate dehydrogenase (NADP+) activity | Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NADP(+) = 5,10-methenyltetrahydrofolate + NADPH. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0472300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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