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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0530000 |
| Transcript ID | LotjaGi1g1v0530000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatase 2C family protein; TAIR: AT3G02750.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9M8R7|P2C33_ARATH Probable protein phosphatase 2C 33; TrEMBL-Plants: tr|I3S7T1|I3S7T1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0530000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:105711584..105714838) extracted from Lotus japonicus Gifu genome v1.2.
TTGTGGCAGGCGGTGGAAGTGTTGAATCGGTACGGGACGGATCTGGTGGGAGAACCGAGGGGTTCGGATTCGGAGTGTTT GGCAGGTTTTGAGTGTTTTCTGAACGTGGTGAGGGCATTGGGAATGGGATCATGCATCTCGGAGGTTGGGGCTGGTGGTG GTTCCCCTCCTCTCCTCACTTATGCGCAGGAATCCAACTTGGACGGCGGGAAGAAGAGGAGGTTGAGGGGTTCCTCTTCA TTTGACTACAAAGTGCCTGGGAGGATGTTTTTGAATGGGTCAAGCGATGTCGCATCCATGTACTGCAAGCAAGGTAAAAA AGGGATCAACCAAGATGCTATGCTTGTTTGGGAGGTTTGTCTCTTTTCTAAACTCTGACCATTTATTAAACTATTGTTCA TGCTTTTACATTACGTTTGTCTATATGTATAGTTGTGCACTTGTGCTACTTGTGTACTTGGACATGAAGGCTCTTTTTTC CTTTTTCTTTCTGATCTGATCTGTGTTTGAAAGTGAAAAAGTCGCATTATTTTAAAGTTAATCAAAGTTGAGCAGGTGGT TTGCTTCAATGAAGGCTTATTAATCTCTTATAACTTCATTTTTTTTTAATTAGCTTTGCTTTTCATCTTAGATCAAGTGG TTGTAGATTAGTTTTGTTCTCTTTTTCCAAATAAAAAGTATACTGGTATACTGGTATATGGAACCTTTTCTCAATGCTTA TGTTTTTACAATTTTACCTGTGTCTGATCTTCTTCACCTCTGTTGATTTCTCTTCCGAACACTTACCTCAATTTTCTTAT GCTTTTGATAGTGTCATTTTCATGTCTCCGGTGCAGTATAACACTAAAGCCAACATCTTACCCTACTTTGCTTTCTTAAA GATTACTGTCTCCTCCTTCTTTCCCACCTTAGCATAGTTTTGAATTTGATATCTCATCAATTGTACAATACAGTTGTTTG TCTGTTGTTTAAATAGTTTAGTCATGGTTAGATTCTTTAAATTTTCTCTTAAGATAAATGATATAGATAGAAATTTTGTT CACTAGTATGTTCATTTTCATTTCGCAGAACTTTGGTTCAAGGGAGGACACCATTTTTTGTGGTGTTTTTGATGGTCATG GACCTTATGGCCATAGGGTTGCGAAGAAAGTCAGGGATTCTTTCCCTTTAAAGCTCATTTCACAACTGGAATTGCATCAT AAGAATAAAGATGAACACAACGGTCACAATAGTGCTGCTGGAAGTTACAATTCCGAAGAGCAATTTAAACTGGTTGATGA GAAACCTAGTCCCGTTGATCATGAGCTTGATGGAACAAATAGTATTTTGGCACTGAGAGAATCTTTTCTAAAGGCTAGTA AGATTATGGACAGAGAGCTGAAGCTGCATCGTGAGATTGATTGTTTTTGCAGTGGGACTACAGCAGTTACTTTGGTCAAG CAGGTAAGCAATATAAATTACAAAAAATTTATGTGGATAGTTTCCATTTTGCTTTTACACTTTGTTTTTACTCATTTTGT TTTTTAGGGGCTGAATCTTGTTGTCGGAAATGTTGGGGATTCAAGAGCTATATTGGGTACCCGAGATCATGATGATTCTC TTATTGCTGTTCAGTTGACCATTGACCTTAAGCCAAATCTTCCAAGTATGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTGTGTGTGTGTCTTTGTGTGTGTGTGTGTGTGTGTCCCAACCCCTTCTGTGTGTCTTCCTTGTGAAACTCCA TTGTTCACTAATGCTAACTTTATTCATAAGGTTGATGGTTGTGCTTGTCTAAGTAAGTAAAATGGACATGCGACTATCAT TTATAGGAATCTATAAGGATATACAATAGACGTGTTGGAGCATTGGAAATATTGGGTTAAAATGCTTCTAAGCCTTTGCT CTGTAACTACTAGAATACTTTAATAATATACATTCAGCAGAACTCTTGTTAAAAGGAAACTTAACAAACATTTTAATATG CACTTGATTTCACGTAGAGGAAGAAGAGAGGATAAAGCTTCGTAAAGGAAGGGTCTTTTGCCTTCAGAATGAACCTGATG TGCCTCGAGTTTGGCTGCCCAACACTGATTTCCCAGGTCTAGCTATGGCACGAGCTTTTGGAGATTTTTGCCTTAAGGAC TTTGGACTGATTGCTGTTCCTGATGTCTCATATCACCACCTTACTGAAAAGGATGAATTTGTTGTGTTAGCAACAGATGG GGTAAGGCCCTAAGGGACTTCTCTGTTTATGATATCATATTTGTAAAACTTGATACATTTCAAAATCATATTTGTAGCCA ATTCTTGAATGCAATTGGCTCCAAATGGTATTTATAGTGCTGCTTGCATTTGAATTGACTTATTACTGTTTAAGCAAGCC ACACATATTAATAAAATTTATCAATTATTATTTGACTTAACCAGTAAGGTAAATGGTAAACACAAACTTGCTCTATATAA AAAGTAGTATTGGAAACTATTGCGTCCTGTTTTCATTTATATATTGGTACCTAAGTTAAAACTGAGATTTGTAGAACTAT TATGATTTGGGAAAGGCTTGCCATGTACATTTATTTATTGGTTTACCCCTTTTTGTGTCTTATATTTAAGTTTGACACAT TATCTTACTCTTAAATGTATTTTCTCCAATTGTCATACACCGTACAATATGTTTTTATTGCTTTTTCTCACAGAAATGAC TTGCATTTTTTACACCAAATGAGGTTATGGAAATATTATTTGATGTTGAGGAATACTTAATTAGATGAATAAAAATTATG CCAACACTTTATCAGAGGAAAACTTCTTTTATTAGAAGGAATAAAGTACAGAAGTTTATTTACCTGAAAGATCTATCTAT CTCTGTCATGAAACTTTCTTGTTCGAGTTGTTTCTCAGCTGGGCATGAAGGAGTTATCATATGTAATGGAGTATTTGATT GTTTTAATCTGATTTTTCTGGGCAGATTTGGGATGTTTTATCCAACGAAGAAGTTGTGGACATTGTGGCATCTTCTCCAC GGTCTACTGCTGCTCGCGTCCTGGTTGAAACAGCTGCTAAGGCATGGAGGTCAAAATTCCCATTCTGTAAGGTTGATGAT TGTGCCGCAGTTTGCCTCTTCTTGAATTCAGATTCAAGTGACAAGTTGACACAGGAGGCAGCAACCGACCAGCTTGAGCA GTCATCTCTACTTGGTGAGAATGGAATTGGAGTGGAAGCTGAAAAATAGCAGTAG
CDS sequence (LotjaGi1g1v0530000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGATCATGCATCTCGGAGGTTGGGGCTGGTGGTGGTTCCCCTCCTCTCCTCACTTATGCGCAGGAATCCAACTTGGA CGGCGGGAAGAAGAGGAGGTTGAGGGGTTCCTCTTCATTTGACTACAAAGTGCCTGGGAGGATGTTTTTGAATGGGTCAA GCGATGTCGCATCCATGTACTGCAAGCAAGGTAAAAAAGGGATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTGGT TCAAGGGAGGACACCATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCATAGGGTTGCGAAGAAAGTCAGGGA TTCTTTCCCTTTAAAGCTCATTTCACAACTGGAATTGCATCATAAGAATAAAGATGAACACAACGGTCACAATAGTGCTG CTGGAAGTTACAATTCCGAAGAGCAATTTAAACTGGTTGATGAGAAACCTAGTCCCGTTGATCATGAGCTTGATGGAACA AATAGTATTTTGGCACTGAGAGAATCTTTTCTAAAGGCTAGTAAGATTATGGACAGAGAGCTGAAGCTGCATCGTGAGAT TGATTGTTTTTGCAGTGGGACTACAGCAGTTACTTTGGTCAAGCAGGGGCTGAATCTTGTTGTCGGAAATGTTGGGGATT CAAGAGCTATATTGGGTACCCGAGATCATGATGATTCTCTTATTGCTGTTCAGTTGACCATTGACCTTAAGCCAAATCTT CCAAAGGAAGAAGAGAGGATAAAGCTTCGTAAAGGAAGGGTCTTTTGCCTTCAGAATGAACCTGATGTGCCTCGAGTTTG GCTGCCCAACACTGATTTCCCAGGTCTAGCTATGGCACGAGCTTTTGGAGATTTTTGCCTTAAGGACTTTGGACTGATTG CTGTTCCTGATGTCTCATATCACCACCTTACTGAAAAGGATGAATTTGTTGTGTTAGCAACAGATGGGATTTGGGATGTT TTATCCAACGAAGAAGTTGTGGACATTGTGGCATCTTCTCCACGGTCTACTGCTGCTCGCGTCCTGGTTGAAACAGCTGC TAAGGCATGGAGGTCAAAATTCCCATTCTGTAAGGTTGATGATTGTGCCGCAGTTTGCCTCTTCTTGAATTCAGATTCAA GTGACAAGTTGACACAGGAGGCAGCAACCGACCAGCTTGAGCAGTCATCTCTACTTGGTGAGAATGGAATTGGAGTGGAA GCTGAAAAATAG
Protein sequence (LotjaGi1g1v0530000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSCISEVGAGGGSPPLLTYAQESNLDGGKKRRLRGSSSFDYKVPGRMFLNGSSDVASMYCKQGKKGINQDAMLVWENFG SREDTIFCGVFDGHGPYGHRVAKKVRDSFPLKLISQLELHHKNKDEHNGHNSAAGSYNSEEQFKLVDEKPSPVDHELDGT NSILALRESFLKASKIMDRELKLHREIDCFCSGTTAVTLVKQGLNLVVGNVGDSRAILGTRDHDDSLIAVQLTIDLKPNL PKEEERIKLRKGRVFCLQNEPDVPRVWLPNTDFPGLAMARAFGDFCLKDFGLIAVPDVSYHHLTEKDEFVVLATDGIWDV LSNEEVVDIVASSPRSTAARVLVETAAKAWRSKFPFCKVDDCAAVCLFLNSDSSDKLTQEAATDQLEQSSLLGENGIGVE AEK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 40 | 386 | 347 | 2.0E-158 | – | |
| PANTHER | 40 | 386 | 347 | 2.0E-158 | ||
| SMART | 50 | 367 | 318 | 3.0E-65 | ||
| Gene3D | 51 | 372 | 322 | 1.0E-74 | ||
| SUPERFAMILY | 54 | 370 | 317 | 3.01E-58 | ||
| CDD | 56 | 369 | 314 | 1.54652E-71 | ||
| ProSiteProfiles | 56 | 369 | 314 | 46.586 | ||
| Pfam | 82 | 346 | 265 | 7.1E-41 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi1g1v0530000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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