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LotjaGi1g1v0578400.2

Overview

Field Value
Gene ID LotjaGi1g1v0578400
Transcript ID LotjaGi1g1v0578400.2
Related isoforms 10
Lotus japonicus genome version Gifu v1.2
Description Glutamate 5-kinase; TAIR: AT2G39800.3 delta1-pyrroline-5-carboxylate synthase 1; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|A0A151THL8|A0A151THL8_CAJCA Delta-1-pyrroline-5-carboxylate synthetase; Found in the gene: LotjaGi1g1v0578400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:111805338..111811508) extracted from Lotus japonicus Gifu genome v1.2.

CGGTAGAGCAAAATCCAGTAAGATGCCACATTTTATTCCATATATTTTTTAATTTAAACATGAAGGGATTCATAAATTAA GGGTAATTAAGATTTATAGCTGGAGTATTTGCAACTAAATCATTGTTCTGCTTTGCTCTAGTCTTGTTGAAGATGAATGG TAGGTAGTTGTACATTACAAAAATTACATGTGTTCGATATTCCTCACTGGTCATGTAATTTTTGTTGCATCTGAAAGTGA TCATCCTTACTGCAGCTTAAAGAACTAAATATGAAGGGGTATGAGGTTATATTGGTGACTTCAGGTGCAGTTGGTCTTGG CCGCCAAAGACTAAGATATCGCAGATTAGCCAATAGCAGGTTTTTGTTCTTTCTCTTTTGCTATAGTTGCTGGACATTTT TAAAAGGCATGAATCCAAGTTTCAAATAATAACTTGTTCTTGATTTCATTACATCTGTTCGTAAAAATTGCTATTAGTTC TGATGGTAGTGATGTTCCGAAAAATAGTATTTTTTTTTCGTAAGCAATAGAAATGTAAAGAAAAACAAAAGTAAATGATT TGATCTTTTCATCAGATCAGCAGAACAAAAACTAGTTATTGTGCAAACTTTTTGCAAATCAAGAAGTAATTCAAGTTTTT CATTGTTCACTCCAAGCTTGCTTCCTTTTTCTGATTTGTTTAACTATGAATAAACCAGCATAGCATTGAAATTTGAAAGA TCTTGTGCGAATTTTTCATGGTTCTGTTGACATGAGGTAGAGTTTGAGCGATAGAGGATGAAAATAATGAGCTTGAAATA AAGTGTCTACTTGTTATGCAGCTTTTCTGATCTTCAGAAGCCGCAAGGAGAACTTGATGGCAAAGCATGTGCAGCTGTTG GGCAGAGTAGTCTCATGGCCCTATATGATATCATGTTTAGCCAGGTGCTAACAAAATTAAGTTTTTGATTAAATATGTCC CGAATCTTATATATGTATCTGTTGCAATAATCCATTAACATGTGTTTATTAATCTGCTTGTATCTCCTATCTATATTGAT GTTAATATGTAACTTTCCTGGTGCAGCTTGATGTGACTTCATCCCAACTTCTAGTGAATGATGGGTTTTTTAGGGATACA GGTTTCAGAAAACAACTATCAGATACTGTGAACTCATTATTAGATTTAAGGGTTATCCCCGTTTTCAATGAAAATGATGC TGTTAGTACTAGGAAGGCACCATATGAGGTATGAACCTTATTTTTTGTTTTTGAGAAAACTTTTTCTGCTTAAAATGTAT TAGTTTTACTTTAGTGGTTTTGTGACATAATAATCTTCTCTTGCGAGCACTGTCTGCAGGATTCTTCTGGAATATTCTGG GATAATGACAGCTTGGCTGGTCTATTGGCTCTGGAACTTAAAGCTGACCTCCTTGTTTTATTGAGTGATGTTGAGGGCCT TTACAGTGGCCCTCCAACTGATCCAAAGTCAAAGTTAATTCACACATATGTAAAAGAAAAACATCAAACAGAAATTACTT TTGGAGACAAGTCAAGATTGGGAAGAGGTGGTATGACTGCCAAAGTTAATGCTGCTGTTTGCTCTGCCTATGCTGGCACA CCTGTGATTATTACTAGGTATCTTCGGTTTTATTTCACTAAGCTATTACTGATACCGTGAGTAAAGTATTGACCTAAAAA TAAATATTCTTGAATTCTATTTCAACCTCCTTTGCAGTGGCTATGCAACAAATAACATCATGAGAGTGCTTCAAGGAGAA AAAATTGGTACTGTCTTTCATAAAGATGCTCATATGTGGACCAGCATAAAGGAAGTGAGTGCACATGAAATGGCAGTTTC CGCACGTGATAGTTCTAGAAGACTTCAGGTAATTAAGGTTACATATTTGGAATGTTAAGTGCAAGGTTTACTGTCGTAAA TTTCTTCAAGTTGGAATTTAACTTTAATTTCGTTTTTGGTTGTTGCCAACGTAATGAGCTCAGATAAGTTGTTTCATTTG TATATTGGTGCTTTTGGCTGCAGATTCTAAATTCTGAAGAGAGGAGGCAAATATTGCTAGATATGGCTGATGCATTAGAG AATAATGATAGTATGATAAGGCTTGAGAATGGAGCTGATGTTGCTGATGCAGAAGAGGCTGGATATGAGAAATCATTGAT ATCACGTTTAACCCTGAGACCCGAAAAGGCAAGAACTTTATTAGTTACCATCTGACATGAATTACTGAAAGATGATTTGC TCAGCATTCTGATTTGCTCACTTTCCACAGCAGGCTTCCTAAAATTTTCTCATTTAGTGAGCATGTTTTTATCTAACCTT TGTTTTTGGATTTTCAGATGTCTAGTCTTGTAAAGTCTGTTCGCATGCTGGCAGACATGGAAGAACCCATTGGTCAGATG ATAAAGAGAACTGAGGTCAAAACCCCCTAAATAATCATGTCATTGACCAGTTATTAAATAACACGTGAAATTGGTTCTGT GATATTGTAAAATATTCGACAGTTTTCATTTTTGACATATTTGAACAATGTAACATGTTTCCAACAATGATTTATGCAAT TATGCTATAGGAATTTCAGGAAAGTGATAATGTTATGAAAACTTGCATTCCATCGTTCAACATTCATTTTGATAGTTCTG ATTACTTCTCTGTTTCCAGCTAGCAGATGAACTCATCCTGGAGAAAATATCATGTCCTTTGGGTGTATTTCTGGTTATAT TTGAGTCTCGGCCTGATGCTCTTGTTCAGGTTAAGATAATTCCTTCTCAATTCTTACCAACATCAGCATTAATTAAAAAT CAGAGCTCCAATATTTTAATTTTTGACTTATGATTCTGAAATTTATACAAATTTGTTAAGTTTATTGAATATTAATCTTT AAGATTACTGTTTGAATTTGTTAATAGATAGCTGCATTGGCAATAAGAAGTGGAAATGGTTTACTGCTTAAAGGAGGAAA GGAAGCCAAACGGTCAAATGCAGTCCTACACAAGGTTTATTTTACTTGATGAATGCAAATCAGAACTCTGTTGTTTCTTT GCCATATTTTTAAGTTTACTATTAATTTTTCCTCTTTAACTTCTTCATTATTGTAGGTCATTACATCAGTTATTCCTGAT AAAGTTGGTAACAAACTTATCGGGCTTGTAACTTCAAGAGAAGAAATTCCAGATCTGCTCAAGGTGGATGATACTACAAG TAAAATTCCTAACCTCTATTTGTCTGAGATTATTTTCAACTAATTAAACTCTGTCACAGCTTGATGACGTGATAGATCTT GTGGTCCCTAGAGGCAGTAGTAAACTTGTTTCTCAAATCAAGGCTTCAACAAGGATTCCTGTTCTTGGTCATGCTGGTAA TAAAAGCATTTAAGTTTCCTATTTTTATGAATTAAAAGCATTTAAGTTAAAATTATAAAAAAAACGATTCTATTAAATTT TTATGTTTGTCATGCAGATGGAATATGCCATGTATATGTTGATAAAACAGCTAATATGGATATGGCAAAGAAGATTGTTA GGGATGCAAAGGTTGATTATCCTGCAGCATGCAATGCAATGGTAATTACAATTCACATTCTCTGCAATGCTCCGACCAGG GCATCATCATCTACATCCACATCTCCTTTTGAGTTTTCTTCATTTTCTGTTCAAGATGTGAATTAAATCTATGAACTTTG CTCATTACGATATTCTGTCCTGATTTTCTTAGGAAACCCTTCTTGTACACAAAGATCTATCAGAAAATGGTGGACTTGAA GAACTTGTTGCTGAACTCCAACGTGAAGGTTTGACCTTAGTTGCAAAATAACTTACAATGAATGAAACATGCATTAATTG GAACTTCTTATTCTTTTTCAATACTTATTAGCTTCATCTTTAGCACCATTTAAATAAGTAGTTTTGACATATTAGTTTTA CTGATGTCCATTTGCTTTCTTCTAACTCAATTTTGATTCCAATCCAAATGTTGAAGAATTTATAGGAGAGATAAATTGTT TGACTAAATGTCTACATATATCTTGAAAACCAAAATTACATTTTGAAAATAAGGGCAATATAAGTAAATTTGTTTTAAAA TCTCACCCCACCTAAACCAAATAAGAAGTGGTTTATTTCCCCTCCCTTCGGCCTCCCTCCGCTCCCTTTGATCAAATACG ATTGCTAGGACATGAATAACTGGAAAAACGTGGACAAATGGAAATAACGCAAGCTAACAAATTGGGAAATGAGGAAATCA GTACCTTGATTCTGAGCTCAAATGTCAAATTATCTATTTTCAGGTGTTCAACTATATGGTGGATCAAAAGCTAGTGCCTT GTTAAATATCACTGAAGCAGACACTTTTCATCATGAGTATAGTTCACTGGCTTGTACAGTTGAAATTGTAGATGATGTAT CTGCTGCCATTAACCACATACATGAACATGGAAGGCAAGTTTTGGTTCACTTTCAAAAACTATGTTTTGAATTTTGATGC TATATATCATGAACATTGTTCTCTTAAAAGTCTCTGTCTTTCTTTCCTTTTTCTGCAGTTCTCATACTGAATGCATTGTT ACAGAAGACTGTGAAGTTGCTAAAACTTTCTTAAGTCAAGTTGACAGGTAAGTGTAGACTTTTCACAGCAGCGTTGTTTG ATCCTTTGCCCAGTTCCTAGTTCTAAAAGATACTAAACTAGCATGATGATATGTCAGTTTACTTCAAATGCCTGCTGTGA TTTGTCTGAACCACAAACCTGTACATTCATTAATATTGGATTAATATTTTCCCCAACATCTAAGTCTTCATGTTCGGCGC TTTTCATGAGTTCCATCAAGATTGTAATGCAAGAATAAAACAATAAATCAGAAGATATTACATGCATTGGGGGAATTGAA CTTAAGATCGTCACATATGTTGAACTTGATTACCATCAACAGAACAAACTTTGTAGGGTGAATTACAATATTGATAGATC AGTGCATATCAAGGTGGATAAGGTCAAGGCTTGATCGGTAGGAAGATTATTACTTCTTACTTAATCCTCTAAACTAATCA TAGAACTTCTGAGGATCATAATGTATTTTTCTATCCTTTATCTCCACCTCTGCGTTTCTACCTTCACATCTAGTCCTGAA TGAATTGCTTCTTCAAAGTCTTCGACTTTACCTCTTACGCGCATTGACGACCCGTACTATATTTCATTTGGACATAATTA CTTTAACATTTAAATAGAATTCATGCTTCTATGTCTTTCAAGTTTTCTACATTTTTTTTTGTTTTTAACTTGATTTTGCT GACTGTTGAATATGGATTTTTGCCTGATGCACAAATAGTGCTGCTGTATTCCACAATGCAAGTACAAGGTTTTGTGATGG AGCACGCTTTGGGCTTGGTGCAGAGGTAGTGCACTTTCCAAAAGCACATTGTGCTAATAGCAGCACTGTAATTCATGTTT TTTCAACTTTCTTTGATATTCATTGTTGTTCAGGTTGGAATAAGCACAAGCAGAATTCATGCCCGTGGCCCTGTAGGAGT TGAGGGGTTATTATCAAATAGATGGTACGAAATTATGCAATGTCTTAGTTTGTATTATTAAAAGAAAAAACACCAAGTGA ACAAACTTTTACAACTATTAATAAAATTGCTAGAGTTGTGCTTGAACATTATTTAATACGTGAATGCTATTTTACCATCA AGATTATGACTTCATACATTTTCTGTTAGACTAAATCTTACCTTGAAATAATGCAGGATATTGAGAGGGACGGGACAAGT GGTAGATGGCGATCGAGGGGTCACTTATACTTACAAGGAACTGCCAATAAAAGCATAACTAGATAGTTAGAGATTAGTTT AAGCTACTATGGATTACTGGTGTTCACCTCATCAAACCCACAGCTATTTTCTGTTCTATTTTCATATACAGAAGCTGCTA TGATGCTGGCACTGTATAATCTTAACTATTCATTCATCCCTTTCCAGATATATTTTTTTTCTCATCTGGAGGGTATTCAG GGGAAAGAAAATAACTATGAATGACTTTATTTAGCTATGTGAAACAGAATTTCAGTGAAGCAGTGACACAGGAATATATA TATCGACACAGGCCATCTGAAGCTATATCCTTGTCAAGTTGCATAATTATATATCTGTTAATCTGTTATTCTTCTTGATA ATCTAACTTAT
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0578400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTTAAAGAACTAAATATGAAGGGGTATGAGGTTATATTGGTGACTTCAGGTGCAGTTGGTCTTGGCCGCCAAAGACT AAGATATCGCAGATTAGCCAATAGCAGCTTTTCTGATCTTCAGAAGCCGCAAGGAGAACTTGATGGCAAAGCATGTGCAG CTGTTGGGCAGAGTAGTCTCATGGCCCTATATGATATCATGTTTAGCCAGCTTGATGTGACTTCATCCCAACTTCTAGTG AATGATGGGTTTTTTAGGGATACAGGTTTCAGAAAACAACTATCAGATACTGTGAACTCATTATTAGATTTAAGGGTTAT CCCCGTTTTCAATGAAAATGATGCTGTTAGTACTAGGAAGGCACCATATGAGGATTCTTCTGGAATATTCTGGGATAATG ACAGCTTGGCTGGTCTATTGGCTCTGGAACTTAAAGCTGACCTCCTTGTTTTATTGAGTGATGTTGAGGGCCTTTACAGT GGCCCTCCAACTGATCCAAAGTCAAAGTTAATTCACACATATGTAAAAGAAAAACATCAAACAGAAATTACTTTTGGAGA CAAGTCAAGATTGGGAAGAGGTGGTATGACTGCCAAAGTTAATGCTGCTGTTTGCTCTGCCTATGCTGGCACACCTGTGA TTATTACTAGTGGCTATGCAACAAATAACATCATGAGAGTGCTTCAAGGAGAAAAAATTGGTACTGTCTTTCATAAAGAT GCTCATATGTGGACCAGCATAAAGGAAGTGAGTGCACATGAAATGGCAGTTTCCGCACGTGATAGTTCTAGAAGACTTCA GATTCTAAATTCTGAAGAGAGGAGGCAAATATTGCTAGATATGGCTGATGCATTAGAGAATAATGATAGTATGATAAGGC TTGAGAATGGAGCTGATGTTGCTGATGCAGAAGAGGCTGGATATGAGAAATCATTGATATCACGTTTAACCCTGAGACCC GAAAAGGCAAGAACTTTATTAGTTACCATCTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0578400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLKELNMKGYEVILVTSGAVGLGRQRLRYRRLANSSFSDLQKPQGELDGKACAAVGQSSLMALYDIMFSQLDVTSSQLLV NDGFFRDTGFRKQLSDTVNSLLDLRVIPVFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYS GPPTDPKSKLIHTYVKEKHQTEITFGDKSRLGRGGMTAKVNAAVCSAYAGTPVIITSGYATNNIMRVLQGEKIGTVFHKD AHMWTSIKEVSAHEMAVSARDSSRRLQILNSEERRQILLDMADALENNDSMIRLENGADVADAEEAGYEKSLISRLTLRP EKARTLLVTI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.1160.10
1 242 242 4.7E-69
IPR036393
SUPERFAMILY
SSF53633
2 237 236 3.27E-44
IPR036393
PANTHER
PTHR11063:SF16
2 327 326 7.9E-208 –
Pfam
PF00696
2 217 216 2.4E-27
IPR001048
PANTHER
PTHR11063
2 327 326 7.9E-208 –
PRINTS
PR00474
9 23 15 8.9E-57
IPR001057
PRINTS
PR00474
53 81 29 8.9E-57
IPR001057
PRINTS
PR00474
93 114 22 8.9E-57
IPR001057
PRINTS
PR00474
132 159 28 8.9E-57
IPR001057
PRINTS
PR00474
191 211 21 8.9E-57
IPR001057
Gene3D
G3DSA:3.40.605.10
243 330 88 7.2E-13
IPR016162
SUPERFAMILY
SSF53720
253 322 70 7.36E-5
IPR016161
Coils
Coil
268 288 21 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0578400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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