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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR016161
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 169 results. Now displaying 1 of 4 with 50 rows per page. This search has taken 5.912s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0015969.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform X2 [Cicer arietinum] gi|502135874|ref|XP_004502483.1| chr0 6224871 6225793 +
2 domain predictions
2 GO terms
Lj0g3v0092639.1
n.a. PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like [Glycine max] gi|356504258|ref|XP_003520914.1| chr0 38648065 38659007 +
2 domain predictions
2 GO terms
Lj0g3v0092639.2
n.a. PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like [Glycine max] gi|356504258|ref|XP_003520914.1| chr0 38652802 38659007 +
2 domain predictions
2 GO terms
Lj0g3v0092639.3
n.a. PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like [Glycine max] gi|356504258|ref|XP_003520914.1| chr0 38656791 38659007 +
2 domain predictions
2 GO terms
Lj0g3v0115579.1
n.a. delta-pyrroline-5-carboxylate synthetase [Lespedeza potaninii] gi|411117725|gb|AFW04294.1| chr0 50797459 50802386 -
2 domain predictions
2 GO terms
Lj0g3v0133709.1
n.a. PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] gi|356497822|ref|XP_003517756.1| chr0 61231409 61235100 -
2 domain predictions
2 GO terms
Lj0g3v0215059.1
n.a. Aldehyde dehydrogenase [Medicago truncatula] gi|357518719|ref|XP_003629648.1| chr0 108961673 108965842 +
2 domain predictions
2 GO terms
Lj0g3v0274549.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max] gi|356557707|ref|XP_003547154.1| chr0 142336542 142340918 -
2 domain predictions
2 GO terms
Lj0g3v0274549.2
n.a. PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max] gi|356557707|ref|XP_003547154.1| chr0 142336542 142340918 -
2 domain predictions
2 GO terms
Lj0g3v0286699.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform X1 [Cicer arietinum] gi|502124011|ref|XP_004498346.1| chr0 148943375 148953155 +
2 domain predictions
2 GO terms
Lj0g3v0286699.2
n.a. PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform 1 [Glycine max] gi|356552695|ref|XP_003544698.1| chr0 148947812 148952614 +
2 domain predictions
2 GO terms
Lj0g3v0286699.3
n.a. PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform 1 [Glycine max] gi|356552695|ref|XP_003544698.1| chr0 148947812 148953155 +
2 domain predictions
2 GO terms
Lj0g3v0299699.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max] gi|356502944|ref|XP_003520274.1| chr0 155706590 155710388 +
2 domain predictions
2 GO terms
Lj0g3v0306219.1
n.a. delta-pyrroline-5-carboxylate synthetase [Glycine max] gi|351726518|ref|NP_001238153.1| chr0 159673949 159677289 +
2 domain predictions
2 GO terms
Lj0g3v0350589.1
n.a. PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like [Glycine max] gi|356562585|ref|XP_003549550.1| chr0 184273776 184277873 +
2 domain predictions
2 GO terms
Lj1g3v0838120.1
n.a. Aldehyde dehydrogenase family 3 member H1 [Medicago truncatula] gi|357463521|ref|XP_003602042.1| chr1 10799127 10804016 -
2 domain predictions
2 GO terms
Lj1g3v1306830.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member I1, chloroplastic-like [Glycine max] gi|356526936|ref|XP_003532071.1| chr1 15737206 15741546 -
2 domain predictions
2 GO terms
Lj1g3v3443810.1
n.a. PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like [Glycine max] gi|356504258|ref|XP_003520914.1| chr1 39838647 39845547 -
2 domain predictions
2 GO terms
Lj2g3v0777150.1
n.a. PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] gi|356520525|ref|XP_003528912.1| chr2 12283581 12293154 -
2 domain predictions
2 GO terms
Lj2g3v0777190.1
n.a. PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] gi|356520527|ref|XP_003528913.1| chr2 12321393 12325532 +
2 domain predictions
2 GO terms
Lj2g3v1014560.1
n.a. PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] gi|356548623|ref|XP_003542700.1| chr2 15671829 15675165 -
2 domain predictions
2 GO terms
Lj2g3v1014560.2
n.a. PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] gi|356548623|ref|XP_003542700.1| chr2 15671829 15675165 -
2 domain predictions
2 GO terms
Lj2g3v2661830.1
n.a. PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like [Glycine max] gi|356551630|ref|XP_003544177.1| chr2 35959079 35966685 -
2 domain predictions
2 GO terms
Lj2g3v2661830.3
n.a. PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like [Glycine max] gi|356551630|ref|XP_003544177.1| chr2 35961743 35969791 -
2 domain predictions
2 GO terms
Lj2g3v3318970.1
n.a. PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] gi|356520527|ref|XP_003528913.1| chr2 41993253 41993938 -
2 domain predictions
2 GO terms
Lj3g3v0948280.2
n.a. PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Cicer arietinum] gi|502087490|ref|XP_004488550.1| chr3 11621261 11635962 -
2 domain predictions
2 GO terms
Lj3g3v3237960.2
n.a. PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Cicer arietinum] gi|502148255|ref|XP_004507095.1| chr3 39943483 39946906 +
2 domain predictions
2 GO terms
Lj3g3v3237970.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max] gi|356542009|ref|XP_003539464.1| chr3 39948155 39948917 +
2 domain predictions
2 GO terms
Lj3g3v3237980.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max] gi|356557707|ref|XP_003547154.1| chr3 39948864 39952870 +
2 domain predictions
2 GO terms
Lj3g3v3360880.1
n.a. PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] gi|356531249|ref|XP_003534190.1| chr3 41237128 41241901 +
2 domain predictions
2 GO terms
Lj3g3v3360880.2
n.a. PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] gi|356531249|ref|XP_003534190.1| chr3 41237128 41241901 +
2 domain predictions
2 GO terms
Lj4g3v0286210.1
n.a. PREDICTED: histidinol dehydrogenase, chloroplastic-like [Glycine max] gi|356524921|ref|XP_003531076.1| chr4 3474193 3484635 +
2 domain predictions
2 GO terms
Lj4g3v0388250.1
n.a. PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating] gi|356521227|ref|XP_003529258.1| chr4 5080918 5087263 -
2 domain predictions
2 GO terms
Lj4g3v1534920.1
n.a. aldehyde dehydrogenase 1 precursor [Lotus corniculatus] gi|29373073|gb|AAO72532.1| chr4 22913803 22921405 -
2 domain predictions
2 GO terms
Lj4g3v1534920.2
n.a. aldehyde dehydrogenase 1 precursor [Lotus corniculatus] gi|29373073|gb|AAO72532.1| chr4 22919668 22923760 -
2 domain predictions
2 GO terms
Lj4g3v1561610.1
n.a. Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2)gi|284055631|pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2)gi|206715496|emb|CAC48393.2| aminoaldehyde dehydrogenase [Pisum sativum] gi|284055630|pdb|3IWJ|A chr4 23233173 23237477 +
2 domain predictions
2 GO terms
Lj4g3v1614820.1
n.a. PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial-like [Glycine max] gi|356562816|ref|XP_003549664.1| chr4 23796407 23804687 -
2 domain predictions
2 GO terms
Lj4g3v1614820.2
n.a. PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial-like [Glycine max] gi|356562816|ref|XP_003549664.1| chr4 23797565 23804687 -
2 domain predictions
2 GO terms
Lj4g3v2267580.2
n.a. PREDICTED: aldehyde dehydrogenase 22A1-like [Glycine max] gi|356521770|ref|XP_003529524.1| chr4 31614249 31622240 -
2 domain predictions
2 GO terms
Lj4g3v2827880.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member I1, chloroplastic-like [Glycine max] gi|356526936|ref|XP_003532071.1| chr4 37932977 37937174 -
2 domain predictions
2 GO terms
Lj5g3v0511010.1
n.a. PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like [Glycine max] gi|356563928|ref|XP_003550209.1| chr5 5426462 5434213 -
2 domain predictions
2 GO terms
Lj6g3v1177340.1
n.a. PREDICTED: aldehyde dehydrogenase family 7 member A1-like [Glycine max] gi|356556396|ref|XP_003546512.1| chr6 14436578 14440774 -
2 domain predictions
2 GO terms
Lj6g3v1629740.1
n.a. PREDICTED: histidinol dehydrogenase, chloroplastic-like [Glycine max] gi|356555910|ref|XP_003546272.1| chr6 18433815 18445098 -
2 domain predictions
2 GO terms
Lj6g3v1904500.1
n.a. PREDICTED: aldehyde dehydrogenase 22A1-like [Cicer arietinum] gi|502084770|ref|XP_004487758.1| chr6 21368712 21371716 -
2 domain predictions
2 GO terms
Lj6g3v1904510.1
n.a. PREDICTED: aldehyde dehydrogenase 22A1-like [Cicer arietinum] gi|502084770|ref|XP_004487758.1| chr6 21372749 21375202 -
2 domain predictions
2 GO terms
Lj6g3v1915890.1
n.a. PREDICTED: aldehyde dehydrogenase 22A1-like [Cicer arietinum] gi|502084770|ref|XP_004487758.1| chr6 21556804 21562398 -
2 domain predictions
2 GO terms
Lj6g3v2192260.1
n.a. PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating] gi|356524788|ref|XP_003531010.1| chr6 25301907 25308478 +
2 domain predictions
2 GO terms
LotjaGi1g1v0085500_LC.1
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.2 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|Q96480|P5CS_SOLLC Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|A0A0R0EVL3|A0A0R0EVL3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0085500_LC LjG1.1_chr1 12322813 12333577 +
2 domain predictions
2 GO terms
LotjaGi1g1v0085500_LC.2
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT2G39800.1 delta1-pyrroline-5-carboxylate synthase 1; Swiss-Prot: sp|P32296|P5CS_VIGAC Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|I1JI26|I1JI26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0085500_LC LjG1.1_chr1 12322813 12333577 +
2 domain predictions
2 GO terms
LotjaGi1g1v0085500_LC.3
n.a. Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.2 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|P32296|P5CS_VIGAC Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|I1JI26|I1JI26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0085500_LC LjG1.1_chr1 12322813 12333577 +
2 domain predictions
2 GO terms