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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0694500 |
| Transcript ID | LotjaGi1g1v0694500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Thioredoxin-like protein aaed1, chloroplastic; TAIR: AT2G37240.1 Thioredoxin superfamily protein; Swiss-Prot: sp|Q9ZUU2|AAED1_ARATH Thioredoxin-like protein AAED1, chloroplastic; TrEMBL-Plants: tr|I3SXS0|I3SXS0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0694500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:126232548..126236366) extracted from Lotus japonicus Gifu genome v1.2.
TCTACATCCACATTATTTATTTATTGCATTACAATAACAATTAGTCTTTTTGGTAATAAAACGAGGTACAAACAAACAGA AGAAGAAGGAAGAAAAAGCTTCCATTCCATGGCATGCTCTCCTTCTACAACGCTCTTCTTGTCCAATTCACCACTTCACC TTAACAAAAATACAAACCAGTTTCCACTGCAAGCATTTCCCACCTTGTCACTAAATCAAAACCTTCAATTATATTCCAAG AATCTACTCAATCTCTCAACAAACCGCCACCATGCAACGACCCTGCCTTCTGCTTCTGCAGGCAAGTTTTGTCTCACTAT TCAGCCATTTCTCTTTGTCATCTAAGAAAAAATAAGCTTTTCCTTTAACTTTTTAATCATTCTGATACATGAAGTTTATT TTTTTTCAAGTGTGCTTATGTTGATTGAATAATCATGTGTAATTTAAGGTTATTGTATTAATGGGTGGGTGTGAACAGGA GTTGAGTCTCCAGTGTTGAGTGAGGACACCACAGGTTCATTGGATTCTGTGAAAGTGTTTGATTTGAATGGAAATGGGAT TCCAATTTCTGATTTGTGGAAAGATAGGAAAGCTGTTGTGGCATTTGCTCGCCACTTTGGGTGATTTTTCTCATATTTCA TACTCAAATTAAATTACCATTTAGCTAAATGCAATTAATTGTTCTTGTTTATGAGATTGATTATGTACCAATTACATGTG CCCCTTTTTCTTCTTTTTGTTTGCATTTATAGGTGCGTGCTTTGCCGCAAAAGGGCTGATTATCTTGCAGCCAAGAAGGT AAAGTTTCCTGCTGTTGTGAAATTTTATTGATAATGATCATGAAATTAGCTATATATTCTTACATGCTTCCACCTTATCT GAAGATTCATCTGATTCTTACCAGAAGCATGAACAATGTTTTATCGCACTTCAAGTCTTTCTGATAAGATGATTTTGGTT CTTATGTTTTATTTTATAGTATCCATAAGATACGCATCTTAAGTCAAAATGTTGGTCCAAACAGGAGCTATAGTTTAATT TCTGCTCCCTTATGTATGCTGTATTGCTGTGTGTTTTTATTGCTTTCTTAAGTTGTAAGCTGTATTTTACCTTCTCTACT TTTGAATGAAGATCTCCTTCCTAATCCTTACCAATGTGTGAAAATCTGAAACATGAATGCCAATTTTCTAGAATATAGCT TGCAATGAAAGTTTTGCTCCTATTTCATCTTGTGTTATATGGTGAAATTGAGGACTTGTACCTCCATTAAATTCAGGTCC AATGTGTTAATGGTACAATGGAAATATTTCTATATCACCAAGACTAGTACCTACATTTACATGGATATGCTCTGTCAACA GGATCTAATGGATGCATCTGGAGTCGCACTTGTTCTAATTGGACCTGGGAGCGTTGATCAGGTATACATGTCAGTATGAT TATAGTGAATGTATGACTGTAGTGAATGTCTGTACTTTTGGATCAGGTTGTTGGATTGGAACTTGGACATTTGTTTCCTT TGTCCACGTTGCATTTTCCTGTGCTGCACTGCATCCACTATCTGCTTTTGGTTAATTAAACATAAATCAGCGTCTCTGAA CATGTATTATAAGCTGTGGTTTTTAATAAGAAAGAGTGCACTTATCCTCTTCAATTGGAATCTAGTTTTATATTTTAGCA AGAGCTCTGTACTGCATTTTACTTGATACAATTCTCCCTCCTATGCTTCCAACAATTATTTTCTGCTTTCTCCTATTGAG TATGCTTGAAATTTGTTGCTAATACTTATATTTAATACAGGCCAAAGCCTTTGCTGAGCAAACAAAATTTGGAGGAGGTA CTGCCTTACAGCTAACCTAATACTGCTAGTTTAAGTAATTTTGTCATCATATATCAGCACTCTGACAGGACCTTGTTATC TGTTCTAGAAATCTATGCAGACCCAACTCACTCATCATATGAGGCCTTCAATTTTGTTTCTGGAGTTTTAACTACATTTA CCCCCAATGTAAGGAAGAAACTTCCAGGTCTTTTATTCATAAAAAGGACATAAATTGAGAACTTTGTTAACTGTACAAAG ATCCCGTTTGGATAAGACTAAAGAGCATTTATTGGAGCTTACCGACTAGAAAAAGTATTGGATAAACTCCAACATAACCA AAAGAACTCAACAAAGAAAAAACTCCAATATATGCTCTTTGGTTCGCATCCAAACAGACTCAAAGGCTCCAATGTTAATT TTAGCTGTTACACTGCAGGCAGGTCTTAAGATAATACAATTATATATGGAAGGTTATCGACAAGATTGGAAGCTTTCATT TGAAAAGGACACCGTTAGTAGAGGAGGCTGGTATGTAATTTATCTCATTAGTCTTAAACTATTTGATTATGCTAATTTTT CAAGATTCGCCTGGTCCTATACTACTGTAAAAGGATCCTTCTTGGTGTCCTCTTGACCTTTTGTTTGTCCAAAATCTTAA AGTTCTGTATTTACTGACTATAAATCTATTATATGTAGGATGTCAGTACATCATCTAGAATCCTTTAAAATATTCTAAGA TACAATGTTCATATTATGAGACATTTCTAGATTTTCTAACAGAATCTAAATCTTTTCTCCAGTCACACTATTAATCATTG ATACTTATATGAATCATACTTTTCCTTTTGTGATTGGCTGAACTTGTCTGAAATTTTCCTTAATAATATGAGCTTGGCTC TTTGGCAGGAAACAAGGAGGAATTATAGTTGCAGGTCCTGGCAAAAATAACATCTCATACTTACACAAGGTATGAGCAAC CCTCAATTCCATTTTTTAATAGAATGCATATCTCTTGTTAGCTTTGCTGCAATTAGTGATCAATCAGCAGAACATCCATG TCATGTGTGCTAACCTTGTCCTGATATCATTATGTGAAATATGTTCATGTGAGCAGGACAAAGAAGCAGGGGATGATCCA GAAATTGAAGATATCTTAAAAGCATGTTGCTCGTGAAGCAAGAAAAGAAGGAGCCACTCTTTTCCTTCTTTATTTATCTT ACTTCGTGAAGGGTGGCACTCTCATCATGAAGCATTGTGTACATCATATTTACCTGCTTCTTATGCTGAGCAGTTGCTTT GCCTTGAGGTTCAGTTATAAGATACATTTAGTACCCGCCACTCGCCAAATGAAGCTCTCAATTTGTAACCTATCACTACT AGACTCTTAATCTTGTATATAACATCTTTCCTTTTCAAGAGAAATTGATTGCGGTCCTTATTACAGATTATTATACCTAG TGTATGTTTGGATTTCCATTGGACACAATGTCAATCCATGTTTGAGTCAAAGGGATAAAATCTTGCTTATACGTTGTGAT CTGTGTTTTCCCGTTTGCATTGACGCTAACAGAACTAAACGGACATGGGACACCTAATAAGTGGCCTGAAACGTGCAGTT CTAAACTTCCTTCTGATGGAGTTCATGAGTGCTAAGTTCATACCCATTGGAAACTTGTTTCCAGCTCATTGCATTGTACA TGCACGAAAAAGCATTAACATGGTTAATGGGCCGGCCCCGCCCTGAGAACATGAGGGCCCTACCATGCATAAGGGGTGCT CGAGTTCAGGGTGATACCTCACCACGCAGTCAAGACTAAAGACGCGCTTCAACCTCTACTAGCAAGGGCCATCGACTTAG GCGGGTAGACTCTTTAGAATCTAGGCTTAAACTTAGAGTTGGGTTCGGTCTGCTCAAAGGCCAAAGTGTAATATAGATCA GGCCCAAATGTAATAGATTTAGGGTTAGAATTTAACCTCACTATAAAAGGCTAAGCCCT
CDS sequence (LotjaGi1g1v0694500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATGCTCTCCTTCTACAACGCTCTTCTTGTCCAATTCACCACTTCACCTTAACAAAAATACAAACCAGTTTCCACT GCAAGCATTTCCCACCTTGTCACTAAATCAAAACCTTCAATTATATTCCAAGAATCTACTCAATCTCTCAACAAACCGCC ACCATGCAACGACCCTGCCTTCTGCTTCTGCAGGAGTTGAGTCTCCAGTGTTGAGTGAGGACACCACAGGTTCATTGGAT TCTGTGAAAGTGTTTGATTTGAATGGAAATGGGATTCCAATTTCTGATTTGTGGAAAGATAGGAAAGCTGTTGTGGCATT TGCTCGCCACTTTGGGTGCGTGCTTTGCCGCAAAAGGGCTGATTATCTTGCAGCCAAGAAGGATCTAATGGATGCATCTG GAGTCGCACTTGTTCTAATTGGACCTGGGAGCGTTGATCAGGCCAAAGCCTTTGCTGAGCAAACAAAATTTGGAGGAGAA ATCTATGCAGACCCAACTCACTCATCATATGAGGCCTTCAATTTTGTTTCTGGAGTTTTAACTACATTTACCCCCAATGC AGGTCTTAAGATAATACAATTATATATGGAAGGTTATCGACAAGATTGGAAGCTTTCATTTGAAAAGGACACCGTTAGTA GAGGAGGCTGGAAACAAGGAGGAATTATAGTTGCAGGTCCTGGCAAAAATAACATCTCATACTTACACAAGGACAAAGAA GCAGGGGATGATCCAGAAATTGAAGATATCTTAAAAGCATGTTGCTCGTGA
Protein sequence (LotjaGi1g1v0694500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MACSPSTTLFLSNSPLHLNKNTNQFPLQAFPTLSLNQNLQLYSKNLLNLSTNRHHATTLPSASAGVESPVLSEDTTGSLD SVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDLMDASGVALVLIGPGSVDQAKAFAEQTKFGGE IYADPTHSSYEAFNFVSGVLTTFTPNAGLKIIQLYMEGYRQDWKLSFEKDTVSRGGWKQGGIIVAGPGKNNISYLHKDKE AGDDPEIEDILKACCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 16 | 256 | 241 | 8.8E-127 | – | |
| PANTHER | 16 | 256 | 241 | 8.8E-127 | ||
| CDD | 82 | 239 | 158 | 7.38038E-36 | – | |
| SUPERFAMILY | 84 | 176 | 93 | 4.11E-11 | ||
| Pfam | 123 | 239 | 117 | 3.6E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0694500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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