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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0694500 |
| Transcript ID | LotjaGi1g1v0694500.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Thioredoxin-like protein aaed1, chloroplastic; TAIR: AT2G37240.1 Thioredoxin superfamily protein; Swiss-Prot: sp|Q9ZUU2|AAED1_ARATH Thioredoxin-like protein AAED1, chloroplastic; TrEMBL-Plants: tr|I3SXS0|I3SXS0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0694500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:126232539..126236577) extracted from Lotus japonicus Gifu genome v1.2.
TGGATCCAGGTTGACGTAGGTGCTTATGCGCCCTATTTCTTCTTGTTAATGCATTTTTGGTTCAGTTAAAAAAAACACAT ATAAATTATATTTTTTTAATGTAGTTCCATTGGAAAATTTGTTTGTGTCTATATTCTGAAAGAATTTTCAGGCCACGGAA CTTGCCACGTTTCTTGGTTCTCATGGTGTCACTTACAAAGTCCTAAACTCTTCTACATCCACATTATTTATTTATTGCAT TACAATAACAATTAGTCTTTTTGGTAATAAAACGAGGTACAAACAAACAGAAGAAGAAGGAAGAAAAAGCTTCCATTCCA TGGCATGCTCTCCTTCTACAACGCTCTTCTTGTCCAATTCACCACTTCACCTTAACAAAAATACAAACCAGTTTCCACTG CAAGCATTTCCCACCTTGTCACTAAATCAAAACCTTCAATTATATTCCAAGAATCTACTCAATCTCTCAACAAACCGCCA CCATGCAACGACCCTGCCTTCTGCTTCTGCAGGCAAGTTTTGTCTCACTATTCAGCCATTTCTCTTTGTCATCTAAGAAA AAATAAGCTTTTCCTTTAACTTTTTAATCATTCTGATACATGAAGTTTATTTTTTTTCAAGTGTGCTTATGTTGATTGAA TAATCATGTGTAATTTAAGGTTATTGTATTAATGGGTGGGTGTGAACAGGAGTTGAGTCTCCAGTGTTGAGTGAGGACAC CACAGGTTCATTGGATTCTGTGAAAGTGTTTGATTTGAATGGAAATGGGATTCCAATTTCTGATTTGTGGAAAGATAGGA AAGCTGTTGTGGCATTTGCTCGCCACTTTGGGTGATTTTTCTCATATTTCATACTCAAATTAAATTACCATTTAGCTAAA TGCAATTAATTGTTCTTGTTTATGAGATTGATTATGTACCAATTACATGTGCCCCTTTTTCTTCTTTTTGTTTGCATTTA TAGGTGCGTGCTTTGCCGCAAAAGGGCTGATTATCTTGCAGCCAAGAAGGTAAAGTTTCCTGCTGTTGTGAAATTTTATT GATAATGATCATGAAATTAGCTATATATTCTTACATGCTTCCACCTTATCTGAAGATTCATCTGATTCTTACCAGAAGCA TGAACAATGTTTTATCGCACTTCAAGTCTTTCTGATAAGATGATTTTGGTTCTTATGTTTTATTTTATAGTATCCATAAG ATACGCATCTTAAGTCAAAATGTTGGTCCAAACAGGAGCTATAGTTTAATTTCTGCTCCCTTATGTATGCTGTATTGCTG TGTGTTTTTATTGCTTTCTTAAGTTGTAAGCTGTATTTTACCTTCTCTACTTTTGAATGAAGATCTCCTTCCTAATCCTT ACCAATGTGTGAAAATCTGAAACATGAATGCCAATTTTCTAGAATATAGCTTGCAATGAAAGTTTTGCTCCTATTTCATC TTGTGTTATATGGTGAAATTGAGGACTTGTACCTCCATTAAATTCAGGTCCAATGTGTTAATGGTACAATGGAAATATTT CTATATCACCAAGACTAGTACCTACATTTACATGGATATGCTCTGTCAACAGGATCTAATGGATGCATCTGGAGTCGCAC TTGTTCTAATTGGACCTGGGAGCGTTGATCAGGTATACATGTCAGTATGATTATAGTGAATGTATGACTGTAGTGAATGT CTGTACTTTTGGATCAGGTTGTTGGATTGGAACTTGGACATTTGTTTCCTTTGTCCACGTTGCATTTTCCTGTGCTGCAC TGCATCCACTATCTGCTTTTGGTTAATTAAACATAAATCAGCGTCTCTGAACATGTATTATAAGCTGTGGTTTTTAATAA GAAAGAGTGCACTTATCCTCTTCAATTGGAATCTAGTTTTATATTTTAGCAAGAGCTCTGTACTGCATTTTACTTGATAC AATTCTCCCTCCTATGCTTCCAACAATTATTTTCTGCTTTCTCCTATTGAGTATGCTTGAAATTTGTTGCTAATACTTAT ATTTAATACAGGCCAAAGCCTTTGCTGAGCAAACAAAATTTGGAGGAGGTACTGCCTTACAGCTAACCTAATACTGCTAG TTTAAGTAATTTTGTCATCATATATCAGCACTCTGACAGGACCTTGTTATCTGTTCTAGAAATCTATGCAGACCCAACTC ACTCATCATATGAGGCCTTCAATTTTGTTTCTGGAGTTTTAACTACATTTACCCCCAATGTAAGGAAGAAACTTCCAGGT CTTTTATTCATAAAAAGGACATAAATTGAGAACTTTGTTAACTGTACAAAGATCCCGTTTGGATAAGACTAAAGAGCATT TATTGGAGCTTACCGACTAGAAAAAGTATTGGATAAACTCCAACATAACCAAAAGAACTCAACAAAGAAAAAACTCCAAT ATATGCTCTTTGGTTCGCATCCAAACAGACTCAAAGGCTCCAATGTTAATTTTAGCTGTTACACTGCAGGCAGGTCTTAA GATAATACAATTATATATGGAAGGTTATCGACAAGATTGGAAGCTTTCATTTGAAAAGGACACCGTTAGTAGAGGAGGCT GGTATGTAATTTATCTCATTAGTCTTAAACTATTTGATTATGCTAATTTTTCAAGATTCGCCTGGTCCTATACTACTGTA AAAGGATCCTTCTTGGTGTCCTCTTGACCTTTTGTTTGTCCAAAATCTTAAAGTTCTGTATTTACTGACTATAAATCTAT TATATGTAGGATGTCAGTACATCATCTAGAATCCTTTAAAATATTCTAAGATACAATGTTCATATTATGAGACATTTCTA GATTTTCTAACAGAATCTAAATCTTTTCTCCAGTCACACTATTAATCATTGATACTTATATGAATCATACTTTTCCTTTT GTGATTGGCTGAACTTGTCTGAAATTTTCCTTAATAATATGAGCTTGGCTCTTTGGCAGGAAACAAGGAGGAATTATAGT TGCAGGTCCTGGCAAAAATAACATCTCATACTTACACAAGGTATGAGCAACCCTCAATTCCATTTTTTAATAGAATGCAT ATCTCTTGTTAGCTTTGCTGCAATTAGTGATCAATCAGCAGAACATCCATGTCATGTGTGCTAACCTTGTCCTGATATCA TTATGTGAAATATGTTCATGTGAGCAGGACAAAGAAGCAGGGGATGATCCAGAAATTGAAGATATCTTAAAAGCATGTTG CTCGTGAAGCAAGAAAAGAAGGAGCCACTCTTTTCCTTCTTTATTTATCTTACTTCGTGAAGGGTGGCACTCTCATCATG AAGCATTGTGTACATCATATTTACCTGCTTCTTATGCTGAGCAGTTGCTTTGCCTTGAGGTTCAGTTATAAGATACATTT AGTACCCGCCACTCGCCAAATGAAGCTCTCAATTTGTAACCTATCACTACTAGACTCTTAATCTTGTATATAACATCTTT CCTTTTCAAGAGAAATTGATTGCGGTCCTTATTACAGATTATTATACCTAGTGTATGTTTGGATTTCCATTGGACACAAT GTCAATCCATGTTTGAGTCAAAGGGATAAAATCTTGCTTATACGTTGTGATCTGTGTTTTCCCGTTTGCATTGACGCTAA CAGAACTAAACGGACATGGGACACCTAATAAGTGGCCTGAAACGTGCAGTTCTAAACTTCCTTCTGATGGAGTTCATGAG TGCTAAGTTCATACCCATTGGAAACTTGTTTCCAGCTCATTGCATTGTACATGCACGAAAAAGCATTAACATGGTTAATG GGCCGGCCCCGCCCTGAGAACATGAGGGCCCTACCATGCATAAGGGGTGCTCGAGTTCAGGGTGATACCTCACCACGCAG TCAAGACTAAAGACGCGCTTCAACCTCTACTAGCAAGGGCCATCGACTTAGGCGGGTAGACTCTTTAGAATCTAGGCTTA AACTTAGAGTTGGGTTCGGTCTGCTCAAAGGCCAAAGTGTAATATAGATCAGGCCCAAATGTAATAGATTTAGGGTTAGA ATTTAACCTCACTATAAAAGGCTAAGCCCTTTATTCAAT
CDS sequence (LotjaGi1g1v0694500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGCATCTGGAGTCGCACTTGTTCTAATTGGACCTGGGAGCGTTGATCAGGCCAAAGCCTTTGCTGAGCAAACAAA ATTTGGAGGAGAAATCTATGCAGACCCAACTCACTCATCATATGAGGCCTTCAATTTTGTTTCTGGAGTTTTAACTACAT TTACCCCCAATGCAGGTCTTAAGATAATACAATTATATATGGAAGGTTATCGACAAGATTGGAAGCTTTCATTTGAAAAG GACACCGTTAGTAGAGGAGGCTGGAAACAAGGAGGAATTATAGTTGCAGGTCCTGGCAAAAATAACATCTCATACTTACA CAAGGACAAAGAAGCAGGGGATGATCCAGAAATTGAAGATATCTTAAAAGCATGTTGCTCGTGA
Protein sequence (LotjaGi1g1v0694500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDASGVALVLIGPGSVDQAKAFAEQTKFGGEIYADPTHSSYEAFNFVSGVLTTFTPNAGLKIIQLYMEGYRQDWKLSFEK DTVSRGGWKQGGIIVAGPGKNNISYLHKDKEAGDDPEIEDILKACCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 127 | 127 | 3.8E-83 | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| Pfam | 1 | 110 | 110 | 1.0E-16 | ||
| PANTHER | 1 | 127 | 127 | 3.8E-83 | ||
| Phobius | 3 | 11 | 9 | - | – | |
| Phobius | 12 | 23 | 12 | - | – | |
| Phobius | 24 | 127 | 104 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0694500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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