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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0722800 |
| Transcript ID | LotjaGi1g1v0722800.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleolar gar2-like protein; TAIR: AT2G42320.1 nucleolar protein gar2-like protein; Swiss-Prot: sp|P54696|MYOH_DICDI Myosin-H heavy chain; TrEMBL-Plants: tr|A0A0B2PDG6|A0A0B2PDG6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0722800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:129416864..129423074) extracted from Lotus japonicus Gifu genome v1.2.
ATCAACACCGGCCATACCCGGTCACCTTCCTGCACCGACACCCCATCCCCCGGTCACCCTCCTGTTTTCCACGTTCCCGC ACTCTCTTCTCTTCTCCCAACAATCACACAGACAGAGACACAACATTGTTGCAGCAACGTTTCTAATCCCAAGAACCTCT TCACTTCACTCTCTCTCTCTCTACCCGTGTTCTGTGTGGTAAGTTCCAACGTTTCTTCTTCTTTTTCCTTTATTGTTACG GTTACAGCTTTTTATCTTCTTCTTCCTTTTTCTCATACTCAACAATCTTGCATGCCTTTACACCATTCTTCTCTGCTAGA TCTTCTTCCTTTACCATTTACTAGTCTACTACTTTCTCCCAATTTCCCTTCTCTGTCCTTGTTTTTGTTTTTTCTGTATA CCATTTGATCATGACGGTTCATAGATTCATCTTCTTCACACTTCGGTTGTACTTGGCATTTGCATTCTTCTTGTAACTGC ATAGTGACATGAAATGGATTGTATGTAGTTCATTGATTACCAGAGCAGAGCATTCACTTCCAAAATATCCCAATTTAGTA ATTTCACCCTTTTCCTTCATGGATTATGTTGGTCATTTTAATTGTTAAAAAATTTTAAAAGATTAAATTTTTCGACAGGT TAGCAATAGTTGTCAAATGGGGTCTTCAAATTATTATTACAATATATATAGCCAGCTTGCATATTTGATTTGATGATTGT GACGCTCATGGAGGATTTTTTTTTTCTTTTCTTCACTCTCTACTTCAAGCTCTCTGTTTTCTTTGTTTTTATCCCTTTTT CTATGGCCAAATAATTCTAGTTTTATTTTTTTTTTTATCAGAAATGGACAATGGTAACCGCATCTTGTGCGTTTGGCTAT TCTTCTTTTATGTAAAGAATATATTTTTCATCGTATTCTATGTCCTTGTCTGAATATTGCACACCTTGCTCCTTCATAGA GCAAAACAAACAAGTTATAATATGTTTGCTCAATGTAGGAACTTGCTTCAATTTCACTAGTGTGAAACAAGATTGCAATT TATTCCCAATTGGGTATCTAGTAGCTCGGACTCTTGTATCAGTGCCTATATGATCTTAATTTGATTTCTGCTTCCCTCTA CCTGCTGAGTTATTACTTTCTAAATGAGGTTTTGATTCATTTGGTGCATTTTTTTGTATTTATTACTACTAATTGTGTGC TCTGAGATCTTTCTGAACTTGTTATCTTTATGGTTTTTCTATATTGGACTTGTGCTGCGTCTCCTGGTACATGTTGTGTT GATGAATTTTAAATGCCTCAACTTTAAATCCCATCTCTTTAATCTTTATTGGTTTCCCTTTTCTAGTTTTTGGCTAGTTT TTTCCTTATTTTTAGAATTTTATAACTTATTTTATCACTACTTTTGCAGGTAGGACATGGTTGTTTTCAATCTGTGGAAA AACTGTTATGGTATTGGTAGTGGACTTTAGGAACTGAGAACTGCTTTGCCACGAAGGAGCTCGCTAAGGTTAGTGAAAGC TATCATTTTCCTGTTACAGCTTCTTGATTTGATTGAAATTTGAGGGAATTTGTAAGCATGAAAGAAACTGAGAAGAGAAA AGCTTCAAGGAATAGTCAGACAAAGGGTTCTAGAAGAACCGAAAGAAGAGAGGATAAATTGCATCAAGATAATTCATCCA AAACATTGAATGAAAAAGGAACTGAATCTAAGACACCCCAGGATAGATCAGCTGCAAATAATTTAGTAGGCGATTCAAAC ACTGCCTCAGAGAATTCAGAAACTTATGAAAACGTGGTTATAGATTATGTGGATGATGTCAACAGGTCTGAGGAGGCACT TGCCGAGATGAAAGTTAATGCAATGGTTGCTAACCAGGCCAGTGATACGGAGAAAGAGCAAAAAGAAGGGAATGGAGAAG TATCAGATACTGATACAGTAAAGGATTCAGTGTCATCCCAAGGTGATTCTTTCACAAATGAAGATGAGAAAGTAGAAAAA GCTTCAAAAGATGCAAAAAGTAAGGTCAAAGTGAGTCCCTCAGAAAGCAGTCGTGGATTAAAGGAGAGATCTGATAGGAA AACAAACAAATTGCAATCCAAGGTATCAGATAGCAATCAAAAGAAACCCATGAACTCAACTAAAGGACCTTCCAGAGTTA CAAACAAGAATACTTCGTCAAACAATTCTAAGCCTGTGAAAGCTCCTGTAAAAGCTTCTTCAGAATCTTCTGAAGGAGTT GATGAAAACCATGTTCTAGAGGTGAAGGAAATCGAGATCCTGGATGGAGCCTCCAATGGTGCTCAGAGCTTAGGAAGTGA AGATGAAAGACATGAGACAGTTAATGCTGAAGAAAATGGTGAACATGAGGACAAGGCTGCTTTGGAACTAAAAATAGAAG AAATGGAATTACGAGTTGAAAAGCTTGAAGAGGAACTAAGAGAAGTTGCTGCTCTTGAAGTGTCACTTTATTCTGTAGTA CCAGAGCATGGGAGCTCAGCACACAAGGTGCACACACCTGCTCGGCGCCTTTCTAGGCTCTATTTACATGCGTCTAAGCA TTGGACCCAAAATAGGCGAGCAACAATAGCCAAGAATACTGTTTCTGGCCTTATATTGGTTGCAAAGTCTTGTGGTAATG ATGTTTCAAGGTATGTACTTGAATTTATTAAAAAAAAATTCATCTGCAGATTTTGATTTCTAGACAACAGATATTCTAAT CTTTGTTTGTATTTTAGGTTAACATTCTGGTTGTCAAACACCATTGTGCTGAGAGAGATAATTTCACATGCTTTTGGCAA TTCATGTCAAGTTAGTCCCCTTATGCGGTTGGCTGAATCGAATGGGGCTGGCAATGGAAAGTCTGCATCCCTGAAATGGA AAGGATTCCCAAATGGTAAAGCAGGAAGTGGTTTCACTCAGTTTGTTGAAGATTGGCAAGAGACAGGAACCTTTACATCT GCCTTAGAAAGAGTAGAATCATGGATCTTTTCTCGGCTAGTGGAGTCAGTGTGGTGGCAGGTATAAATGTTTGTCTCGTG TCTAAGTTGTTGTTTATAATTAAGACATGGAGGCTTTCACTGATGTAAGAAAACAACAATTGAGAGCAGTACATTGTGTA TTCCAATCTATGCTTCATCTAGTTATTCAGTTTGATTGAGTAGGAAATAATCATTCTTTCTTATTGTCGTTAAATATCTT ACATTTTAAGTAACCAGTGTTTGCTATTATGGTTAGAGATAGGCTCATTCATTTTGTGATTAAATATATGCGAACATGCC GCTCCTTTCTAACATCACCGTTATTGACTAGTGTCATTAATAGTATTTATTTATTACTTGTAAAATTGGATACACTAAAT AAGAAGTGATTGATCTATTTTATGATGCTCTTGACACAGTTGATCTTGGTCTCAATTTTTTGAAGCATTAATGATAAATT GAGAAGCATGCTATGTTTTCAGGCTTTGACTCCTTACATGCAGTCTCCAGCTGGGGACTTCTCTTCAAATAAATCCTTTG GGAGGGTGCTGGGACCTGCACTTGGAGATCATAATCAAGGAAACTTTTCCATCAATCTCTGGAGATATGCTTTCGAAGAT GCTTTTCAAAGACTCTGTCCTCTTCGAGCTGGAGGGCATGAGTGTGGTTGTTTGCCTGTGTTGGCTAGAATGGTATGCTT TTTTTATTACTCCTTAGGTTCTTTAAAATGTTCACTTTCCCTCCTTTGCAGGATTGAATAGATTTAAACTCTTTCACCAG GTCATGGAACAGTGCATAGCTAGACTAGATGTTGCCATGTTCAATGCTATTCTTCGGGAGTCAGCCCTTGAGATCCCAAC TGATCCTATATCAGATCCTATATTGGATTCAAAGGTTTTGCCAATTCCAGCAGGAGATTTAAGCTTTGGATCTGGTGCAC AGCTAAAGAATTCTGTATGTATTTTTTTCTTATTACAGCTTTGTGTTCATACTTCACACATTGTCTAAAAATTGAGTTTG AACATTTGAATTTCTAAGCTGGCAGGGGGGAACTTTCCTCTTCTGTAGTGCATCAGTTTCTTGGGGGGACAACTTGTTGA TGGGGGCTTATAGTGTGTTTTATTTTTTATTTTTTATTTTTATTAAATAGTAAGATAAACAAATTGATTTTGTCTGCTGA GACCTGCTTGAGTTGAAAGTTGAAACTTAATCTTCTAGGTATCGAAGCATTACTCTGAGGTTAACCATGGGTTATTCAAT AATTCTATCATCTGACATTATTGTTTACAGAACATATTATAGTGAATATAAGAAAATCCGTGTCTCATATCCACTGCTTT AGTTTATCTGTTCAACCACTCTAACTTGCATTAACTGGTTACTTTTTAGTGTTTTCTTTCTGAGGAGAAAAAAGCATGGT GAATATTTGGTGTCCTGGGCCCTCCTATATTCGAACCTCATAAATTCTCAATAGATCATCTTCTCAGAAGATATCATGCT GTATGCCATTTGTGATTTTATACAGTGAACTCTTCAATTACTTGTTAGTCTCAATGCTTAGCAATGTCAGAGCGGCTAAA AGTGGTGAAATTGAAAAAAAAATTGATTTATCAAAAAATGGTGTTTATATCTTGTACTTGATGTGAGTCATGTGACTCTT ATGCAGTGCTAAGGTGTCATCACATACATAAGTTATGCCAAAAGGTGTTTATGCTTACGGAAGAGCTACTTGAATTGCAG GTTGGGAATTGGTCTAGGTGGCTTACTGATATGTTTGGCATGGATGTCGAAGATTGTGTGCAAGAATATCAGGACAGCGG TGAGAATGATGAAAGGCAAGGTGGAGATGGCGAACCTAAACCTTTTGTTCTCTTAAACGACTTGAGCGACCTTCTAATGC TCCCAAAAGACATGCTTATAGATAGACACGTCAGAGAGGAGGTTAATTTCATGAATTATATGGTGTTTTCTACTGTAGCA TATCACTTTCTCTTTTCATTGTTTTGTCACTGCATTTATTCCATATCTTTTTTTGTTGTGCAGGTATGTCCATCCATCAC TCTTTCATTGATAATTAGGGTCCTCTGCAACTTCACCCCGGATGAGTTCTGTCCAGATCCTGTTCCAGGAACTGTCTTGG AGGCCCTGAACGCGGAGGTATACTCCACATCTCTTGCATTTTTTCAGCTGTTCATGAGACTACATAAACTTGCTGCTATA TTTACAGTATGTTAGGATCACTTCATTTTTCCTCAACCATTTTTGGCATGTAGGAATGAAATGTAGAAGGGTTTCCAGAC ATGCTATTAGCAGCTTATGATAAGTCTGGGAATTTGTCTGAAAATTTTAATTAAACATTCAATTTTATGTTTATATGGTA TGTTATGATTTATGAACACCTACCTGGTTATTAAATTTTGGTTTCTCTCAACATGCATGACTTTAATAACCAATTTGCAT TGGCAAGGGAAGGAGAAATAATTTATTTAAATTCTGACATTGATAATGCCATTAACGCAATGTCAATTTCGTGTATAGAG TACATATTTTGCAACTTCCTGTTCTACACAATAGTTGACCTCTGCTATTAAAGTGAAAACTAGTTTATTGAATTTTACTT ATTTTCAACTATAGACTATTGCGGAACGAAGATTGTCAGCAGAATCTGTCAGAAGCTTCCCTTATGCCGCCGCCGCAGTT GTGTATGTGCCTCCTTCCTCATCTAATGTGGCAGAGAAAGTTGCAGAGGCAGGAGGAAAGTCTCACCTGGCAAGGAATGT ATCAGCTGTTCAGAGGAGAGGATATACCAGTGATGAAGAACTGGAGGAACTTGATTCCCCTCTTACATCCATCATTGATA AGCTTCCTTTATCTCCAACTGTCTCTGCTAATGGACAAGATAATCAAAAAGAGCACAAGAGCTATACCACCACTACAAAT GCTAGATATCAACTCCTCCGTGAAGTTTGGTCCATGTGAACCTTGAGAGTTCCCAATATGTGTACCCCAGTTTTTGTTTT TTACCAAAGGAAAATTGAATATGTAAAATATGTAGGAACAATGGAAGTAAAGTAAAAAAAGAATTTGAATAATAATAATA TCTGCATCCTGTAGTTAAGTGAGCATGTTCTGTGTACATGAGTTGCTAGGAGTTAGCTATAGAGCTTAAATGCATGAAAA CACTAGAACATTCTCCATATTAGTCTAGAAATTTTAGAAAAGAAAGTAGTG
CDS sequence (LotjaGi1g1v0722800.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAGAAACTGAGAAGAGAAAAGCTTCAAGGAATAGTCAGACAAAGGGTTCTAGAAGAACCGAAAGAAGAGAGGATAA ATTGCATCAAGATAATTCATCCAAAACATTGAATGAAAAAGGAACTGAATCTAAGACACCCCAGGATAGATCAGCTGCAA ATAATTTAGTAGGCGATTCAAACACTGCCTCAGAGAATTCAGAAACTTATGAAAACGTGGTTATAGATTATGTGGATGAT GTCAACAGGTCTGAGGAGGCACTTGCCGAGATGAAAGTTAATGCAATGGTTGCTAACCAGGCCAGTGATACGGAGAAAGA GCAAAAAGAAGGGAATGGAGAAGTATCAGATACTGATACAGTAAAGGATTCAGTGTCATCCCAAGGTGATTCTTTCACAA ATGAAGATGAGAAAGTAGAAAAAGCTTCAAAAGATGCAAAAAGTAAGGTCAAAGTGAGTCCCTCAGAAAGCAGTCGTGGA TTAAAGGAGAGATCTGATAGGAAAACAAACAAATTGCAATCCAAGGTATCAGATAGCAATCAAAAGAAACCCATGAACTC AACTAAAGGACCTTCCAGAGTTACAAACAAGAATACTTCGTCAAACAATTCTAAGCCTGTGAAAGCTCCTGTAAAAGCTT CTTCAGAATCTTCTGAAGGAGTTGATGAAAACCATGTTCTAGAGGTGAAGGAAATCGAGATCCTGGATGGAGCCTCCAAT GGTGCTCAGAGCTTAGGAAGTGAAGATGAAAGACATGAGACAGTTAATGCTGAAGAAAATGGTGAACATGAGGACAAGGC TGCTTTGGAACTAAAAATAGAAGAAATGGAATTACGAGTTGAAAAGCTTGAAGAGGAACTAAGAGAAGTTGCTGCTCTTG AAGTGTCACTTTATTCTGTAGTACCAGAGCATGGGAGCTCAGCACACAAGGTGCACACACCTGCTCGGCGCCTTTCTAGG CTCTATTTACATGCGTCTAAGCATTGGACCCAAAATAGGCGAGCAACAATAGCCAAGAATACTGTTTCTGGCCTTATATT GGTTGCAAAGTCTTGTGGTAATGATGTTTCAAGGTTAACATTCTGGTTGTCAAACACCATTGTGCTGAGAGAGATAATTT CACATGCTTTTGGCAATTCATGTCAAGTTAGTCCCCTTATGCGGTTGGCTGAATCGAATGGGGCTGGCAATGGAAAGTCT GCATCCCTGAAATGGAAAGGATTCCCAAATGGTAAAGCAGGAAGTGGTTTCACTCAGTTTGTTGAAGATTGGCAAGAGAC AGGAACCTTTACATCTGCCTTAGAAAGAGTAGAATCATGGATCTTTTCTCGGCTAGTGGAGTCAGTGTGGTGGCAGGCTT TGACTCCTTACATGCAGTCTCCAGCTGGGGACTTCTCTTCAAATAAATCCTTTGGGAGGGTGCTGGGACCTGCACTTGGA GATCATAATCAAGGAAACTTTTCCATCAATCTCTGGAGATATGCTTTCGAAGATGCTTTTCAAAGACTCTGTCCTCTTCG AGCTGGAGGGCATGAGTGTGGTTGTTTGCCTGTGTTGGCTAGAATGGTCATGGAACAGTGCATAGCTAGACTAGATGTTG CCATGTTCAATGCTATTCTTCGGGAGTCAGCCCTTGAGATCCCAACTGATCCTATATCAGATCCTATATTGGATTCAAAG GTTTTGCCAATTCCAGCAGGAGATTTAAGCTTTGGATCTGGTGCACAGCTAAAGAATTCTGTTGGGAATTGGTCTAGGTG GCTTACTGATATGTTTGGCATGGATGTCGAAGATTGTGTGCAAGAATATCAGGACAGCGGTGAGAATGATGAAAGGCAAG GTGGAGATGGCGAACCTAAACCTTTTGTTCTCTTAAACGACTTGAGCGACCTTCTAATGCTCCCAAAAGACATGCTTATA GATAGACACGTCAGAGAGGAGGTATGTCCATCCATCACTCTTTCATTGATAATTAGGGTCCTCTGCAACTTCACCCCGGA TGAGTTCTGTCCAGATCCTGTTCCAGGAACTGTCTTGGAGGCCCTGAACGCGGAGACTATTGCGGAACGAAGATTGTCAG CAGAATCTGTCAGAAGCTTCCCTTATGCCGCCGCCGCAGTTGTGTATGTGCCTCCTTCCTCATCTAATGTGGCAGAGAAA GTTGCAGAGGCAGGAGGAAAGTCTCACCTGGCAAGGAATGTATCAGCTGTTCAGAGGAGAGGATATACCAGTGATGAAGA ACTGGAGGAACTTGATTCCCCTCTTACATCCATCATTGATAAGCTTCCTTTATCTCCAACTGTCTCTGCTAATGGACAAG ATAATCAAAAAGAGCACAAGAGCTATACCACCACTACAAATGCTAGATATCAACTCCTCCGTGAAGTTTGGTCCATGTGA
Protein sequence (LotjaGi1g1v0722800.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKETEKRKASRNSQTKGSRRTERREDKLHQDNSSKTLNEKGTESKTPQDRSAANNLVGDSNTASENSETYENVVIDYVDD VNRSEEALAEMKVNAMVANQASDTEKEQKEGNGEVSDTDTVKDSVSSQGDSFTNEDEKVEKASKDAKSKVKVSPSESSRG LKERSDRKTNKLQSKVSDSNQKKPMNSTKGPSRVTNKNTSSNNSKPVKAPVKASSESSEGVDENHVLEVKEIEILDGASN GAQSLGSEDERHETVNAEENGEHEDKAALELKIEEMELRVEKLEEELREVAALEVSLYSVVPEHGSSAHKVHTPARRLSR LYLHASKHWTQNRRATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISHAFGNSCQVSPLMRLAESNGAGNGKS ASLKWKGFPNGKAGSGFTQFVEDWQETGTFTSALERVESWIFSRLVESVWWQALTPYMQSPAGDFSSNKSFGRVLGPALG DHNQGNFSINLWRYAFEDAFQRLCPLRAGGHECGCLPVLARMVMEQCIARLDVAMFNAILRESALEIPTDPISDPILDSK VLPIPAGDLSFGSGAQLKNSVGNWSRWLTDMFGMDVEDCVQEYQDSGENDERQGGDGEPKPFVLLNDLSDLLMLPKDMLI DRHVREEVCPSITLSLIIRVLCNFTPDEFCPDPVPGTVLEALNAETIAERRLSAESVRSFPYAAAAVVYVPPSSSNVAEK VAEAGGKSHLARNVSAVQRRGYTSDEELEELDSPLTSIIDKLPLSPTVSANGQDNQKEHKSYTTTTNARYQLLREVWSM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 46 | 46 | - | – | |
| MobiDBLite | 1 | 71 | 71 | - | – | |
| MobiDBLite | 47 | 71 | 25 | - | – | |
| MobiDBLite | 99 | 224 | 126 | - | – | |
| MobiDBLite | 103 | 117 | 15 | - | – | |
| MobiDBLite | 118 | 132 | 15 | - | – | |
| MobiDBLite | 133 | 173 | 41 | - | – | |
| MobiDBLite | 174 | 211 | 38 | - | – | |
| PANTHER | 225 | 798 | 574 | 4.1E-267 | – | |
| PANTHER | 225 | 798 | 574 | 4.1E-267 | – | |
| MobiDBLite | 240 | 262 | 23 | - | – | |
| MobiDBLite | 246 | 262 | 17 | - | – | |
| Coils | 266 | 293 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0722800.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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