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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR31344
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 19 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.015s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0125289.1
n.a. PREDICTED: nuclear pore complex protein Nup205-like isoform X2 [Cicer arietinum] gi|502172049|ref|XP_004515149.1| chr0 56265826 56288237 -
1 domain prediction
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Lj0g3v0125289.2
n.a. PREDICTED: nuclear pore complex protein Nup205-like isoform X1 [Cicer arietinum] gi|502172044|ref|XP_004515148.1| chr0 56265826 56288237 -
1 domain prediction
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Lj0g3v0332399.1
n.a. PREDICTED: nuclear pore complex protein Nup205-like isoform X2 [Cicer arietinum] gi|502172049|ref|XP_004515149.1| chr0 173964587 173969407 +
1 domain prediction
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Lj1g3v3834170.1
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508708966|gb|EOY00863.1| chr1 43616385 43629905 +
1 domain prediction
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Lj1g3v4289080.1
n.a. Nucleolar protein gar2-related isoform 1 [Theobroma cacao] gi|508717499|gb|EOY09396.1| chr1 50545814 50550908 -
1 domain prediction
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Lj1g3v4289080.3
n.a. Nucleolar protein gar2-related isoform 5 [Theobroma cacao] gi|508717503|gb|EOY09400.1| chr1 50545814 50552126 -
1 domain prediction
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Lj1g3v4289080.4
n.a. Nucleolar protein gar2-related isoform 2 [Theobroma cacao] gi|508717500|gb|EOY09397.1| chr1 50545814 50549241 -
1 domain prediction
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Lj2g3v2506760.1
n.a. Nucleolar protein gar2-related isoform 4 [Theobroma cacao] gi|508717502|gb|EOY09399.1| chr2 34813208 34816693 -
1 domain prediction
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Lj5g3v1188060.1
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508708966|gb|EOY00863.1| chr5 19142105 19150327 -
1 domain prediction
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Lj5g3v1188060.3
n.a. Uncharacterized protein isoform 2 [Theobroma cacao] gi|508708967|gb|EOY00864.1| chr5 19145415 19150188 -
1 domain prediction
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LotjaGi1g1v0622000.1
n.a. Nucleolar-like protein; TAIR: AT3G01810.1 EEIG1/EHBP1 protein amino-terminal domain protein; Swiss-Prot: sp|P54696|MYOH_DICDI Myosin-H heavy chain; TrEMBL-Plants: tr|K7MXD2|K7MXD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0622000 LjG1.1_chr1 116918773 116935803 +
1 domain prediction
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LotjaGi1g1v0722800.1
n.a. Nucleolar gar2-like protein; TAIR: AT2G42320.1 nucleolar protein gar2-like protein; Swiss-Prot: sp|P54696|MYOH_DICDI Myosin-H heavy chain; TrEMBL-Plants: tr|A0A0B2PDG6|A0A0B2PDG6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0722800 LjG1.1_chr1 129414611 129423131 -
1 domain prediction
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LotjaGi1g1v0722800.2
n.a. Nucleolar gar2-like protein; TAIR: AT2G42320.1 nucleolar protein gar2-like protein; Swiss-Prot: sp|P54696|MYOH_DICDI Myosin-H heavy chain; TrEMBL-Plants: tr|A0A0B2PDG6|A0A0B2PDG6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0722800 LjG1.1_chr1 129414647 129423131 -
1 domain prediction
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LotjaGi1g1v0722800.3
n.a. Nucleolar gar2-like protein; TAIR: AT2G42320.1 nucleolar protein gar2-like protein; Swiss-Prot: sp|P54696|MYOH_DICDI Myosin-H heavy chain; TrEMBL-Plants: tr|A0A0B2PDG6|A0A0B2PDG6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0722800 LjG1.1_chr1 129414647 129423131 -
1 domain prediction
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LotjaGi1g1v0722800.4
n.a. Nucleolar gar2-like protein; TAIR: AT2G42320.1 nucleolar protein gar2-like protein; Swiss-Prot: sp|P54696|MYOH_DICDI Myosin-H heavy chain; TrEMBL-Plants: tr|A0A0B2PDG6|A0A0B2PDG6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0722800 LjG1.1_chr1 129416618 129423149 -
1 domain prediction
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LotjaGi1g1v0722800.5
n.a. Nucleolar gar2-like protein; TAIR: AT2G42320.1 nucleolar protein gar2-like protein; Swiss-Prot: sp|P54696|MYOH_DICDI Myosin-H heavy chain; TrEMBL-Plants: tr|A0A0B2PDG6|A0A0B2PDG6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0722800 LjG1.1_chr1 129416864 129423074 -
1 domain prediction
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LotjaGi1g1v0722800.6
n.a. Nucleolar gar2-like protein; TAIR: AT2G42320.1 nucleolar protein gar2-like protein; Swiss-Prot: sp|P54696|MYOH_DICDI Myosin-H heavy chain; TrEMBL-Plants: tr|A0A0B2PDG6|A0A0B2PDG6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0722800 LjG1.1_chr1 129416864 129423074 -
1 domain prediction
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LotjaGi3g1v0381700.1
n.a. Nuclear pore complex Nup205-like protein; TAIR: AT5G51200.2 nuclear pore complex protein (DUF3414); Swiss-Prot: sp|F4KBW6|NU205_ARATH Nuclear pore complex protein NUP205; TrEMBL-Plants: tr|K7KWK9|K7KWK9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0381700 LjG1.1_chr3 77459208 77504176 +
1 domain prediction
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LotjaGi5g1v0190000.1
n.a. Nucleolar-like protein; TAIR: AT5G43230.1 EEIG1/EHBP1 protein amino-terminal domain protein; Swiss-Prot: sp|P54696|MYOH_DICDI Myosin-H heavy chain; TrEMBL-Plants: tr|K7LK51|K7LK51_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0190000 LjG1.1_chr5 48232633 48241237 -
1 domain prediction
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