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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0743300 |
| Transcript ID | LotjaGi1g1v0743300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620); TAIR: AT5G06610.1 lipase (DUF620); Swiss-Prot: sp|P59273|Y2251_SHEON UPF0227 protein SO_2251; TrEMBL-Plants: tr|I1NAZ2|I1NAZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0743300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:131694750..131698857) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTCGACTCGCCACATTATCAGAAGAACCCATCAACGAGCAAGATGATGATGGAAGAAGGAAAGCATATTGGCGCAA ATGGAACTGGGTGATGTTCAAAACTCACTTCAGCTTCCACAACAAGAAGCCTGACCTCAAAATCCTCCTCAGTGTTCTTG CTTCCCCTCTCTTCCCTGTTCCTCCCAAACCCAAACCACCCATCAATCAGGCAAGCCACCATTTTTCTTCTAGATCATAT CATCTATATATATGTTTGAACTTTGAATACCAGTTAAGTGCCGTATAAACTGTTTTTCATCCGAACACATAAGGAGTTGT GTTCAGCACCATTGTCAACAGATATCTAAACATAGCTTATACACGCATTCTATATATTTCTTATTACTTGTCATTTTCCA GTGATTTTAGAAGCATGATATACAGCTTGCTTCATGAATTTTTGAACAATACTATATGTTACTATTTATTTGGTATTAAT GATAACAGTGGATGTATATATTCTTTCTACATCTAACACTACTAATAAAGTTAGCACAAAAAGAAAAAAAAATTGTTCTG TAATATGAATGAGGGGAACTATATATTTTGGCCACTTTTCTGAACAATCTTCATACTTCATTTGTACCACCAATAAATAG GTTGTCATTTCCCAACCCCACTTGCAGGCTCTCTTTTCTTTTGGACCAAAATGAATGTGTCCCTGTCTCTGTTTTTCCAT GTGCATCTGATTCACACTAAAGATTGAAACTTTTTGCTTCCCATCCACTACTAACTAGTAACTAGCAGGTTTAAGGCATT TGAATAGTAATGATTAATTATTTATCACTGTTGGTTGTAATTAGTTGTGGTCTTTATTATTTATTTATAGCATGTTAGAA TCAACTTCATTTTCATTAGAAACTTTTCTAAGAACACGGAGAAACTTTTTCCCAAAATTGATTATGACTTCAAAATCAAT TCATTTCGTAGAAAGATTTTTAAAAATACACTTAATTACTTTTGATGCGATAGCTAGGTGTCAGGATCAGCTCAGTATAT CATCCAGCACTTCACGGCAGCAACAGGGTGCCGGAAGTTGGAGGGGAAGGTGAAGAACGTGTTCTCCACAGGGAAGGTGG CGATGGGGGTGGTGGATGAGGTTGGAGGAGTCTCTGAAAAAGGGTGCTTTGTCATGTGGCAAATGGTCCCAGATAAGTGG CAGATTGAGCTGGTTGTGGCCGGCCACAAGGTTGTTGCTGGTTGCGACGGAACCGTCGCGTGGCGCCACACCCCTTGGCT CGGACCTCATGCCGCCAAAGGTGGTGGCGTGCGCCCTCTTCGTCGCGCTATTCAGGCAAGTCCTTTCACTCTTTAGCATG TTTGGTTACAAAGTACAATGTTTTTTTTTTAGAACCACTTGTGTTTAATACTCCCCAGTAGTTAATATTTTAGCTACTAA CTAATGGTGACTTGGTTATGTGCAAATTGTTATAAAATTTCTGAAGTTCTAACTACTGGGGAGTTGTTGGTCTGTTTGTT AATGTTCTTCTTGTTGTCTAGTACTATTTTATTTCTGGCTAAGCAAGGTTTGTTGATATTTAATTCCGAAATTGCTGGTG GTGTTTTTGAGTATTTCTAATGTTTTTGGACACTAGTTCCAATTTAGGGAGCGAGAATTCAATGTGATGTATGCTTTGAA TCATGATGATGCTTGGCTAAATAAATATAGTGTCACATGATAAGTTACACAATGAAAAGTCATGATGAATTAAAATTACG ATGAATAGAAATAATTTTTCATTTAACTTTTGTAGTTGTTCACTATGATTTTAGCTTCACAGTGGTTTCTCATTATATAT TCGAACATGCATTCATAATCACAATGGTATGGTATGTATGGCTACATGGTTCAACTTTGTTTATTAAATATATTCATTTG AGGAATGATCCCCTTTAAAAGTGGGCTTTGGTCAGGTTTGGAATTTAATTACCATGAGAAAAGAGTTACTTTTTTTTTGA ACGTGAGAAAAGAGTTACTTAATCTATCTCTTTTTGTCTGCATTCAATAGTTAATTTGTGTCCACTAATCTAAGTCAAGT CAAATAGATTGTTTATGAACAACACTTTGTAGGATCATCTATAACTAAAATCAAGATCTTGAATAAGAAAAATCCAGCTT CTTATTACTTGAATATACGGGTGTTGGTGTTACTGAAATAGTATTTTATTATATGAGTAACTAATGTACTCATACTAAAA TGTCCAATTTTTCTACAAAAATCATAAGTGTCGGTTGATGACTGTTTTGGTCCACTTTACTTATTATTATTATTTTTTTA TAATGTGGAGGGCTAAAGCCCCTGTTTTGTCCACTTTAATTAATATAGTTGTTTTTTTCCCACATTACCGGCCAATAAAT TGGATCTTTGTTTCCCTTCTAAATTCCCTTCCTCTGTTTGATACTTTGATCTATGCACATTCTTCTGTTTCCTTTGTTTA TGGGGAGGAATCAAATTCAATTATCACGTGTAATTATTTTGACTTGTTATTTAAGATTCTTTGATTAAAAAAACAAAGCT CAAGATGACACACAGACAAAGGAATTGAATTTATTGTCATACTGAAATTTCAAACTACTTTTTATGGATCATTAGATTTG GCACCCCAACCATTAGAAATGTCACCCCACTTACGGAAACTCAGTTTCCGAAATATTTCGGAAATAAGGTTTCCGAAGCA CTTTTTTACTCAAAAGTGTGGTTTTTTACTCAAAAGTGTGGTTTTTTACTCAAAAGTGTGGTGTTAGATGTATTTTGAAC TAAAAATCATGAATTAATTTCGGAATCTAAATAATTCGGAACTTGAAAATCCGAAAATTAGGGGTGTGAAATCTAATGGT TGGGGTGGCAAATCTAGCTCTCCTTTTTATGGAAAACGTTGGCTATTGGCCAATCTGGTCCACCCTGCAGCTATGATCTA GAAAATATATGGTATAGTGACTTGACTTTATCAGCATCTACCATGGTACTCTTGCTGTTACTGTTTTTGTCACCCTTAAA GGACAAAGTGTGCAATTCTCATTTTGTAAAATCACTTTTTAATGATAATATAGAGTTTGTTTGGTTTATTCTTTTTGATG AAGTACCAAATTGTTGTTTCAACAAAAAGTGTTCAGGGTGTCTTATTTTTCACTTTTCATTCTTTCTAATTGTAAATTAA AAGTAAATTCATGAACAAATTGTGATGAAACTAAAACATGGTGAAAAGCAGCAACCGTTAGTTGCTTTTATGTTACCAGA TTCAGGTGATCCTATTATGAAAACAAAACATACTTATAGACGTTTAGGAGTCATAACTGAGGAATTAATTTTAACTCCAA AATCAATTCTGCATAGAAGTTAGAAAGAGTAGCTTTTGCGTTCAATATAATCCATTATGAGATTTTATAATTGGATTTCA CACTATTACTTAAAAATTAAAATTTTCGCAAATGCGTGTCATAAATCATTTCACTCTCAATTCACTTACACTTATTTTTA CCAAAATTAATTATGAGAACTCTGATACAAACCTGTACAAATTGGTTATAAATGTTGTAGGGACTAGACCCTTTGGCAGT GTCTGCTGTATTCGATGCTGCACAATACATGGGAGAAAAACAAATCTCAGGCATGGATTGTTTTGTGTTGAAGTTATCAG CTGATCAAACGGACTTAGTTGACCGCAGTGATAACACTGCAGAGATGATCAAGCATGTTACATTTGGTTACTTCAGCCAG AGAAATGGATTACTGGTTTATTTAGAAGACTCTTACTTGACAAGGATTCAATCACCTGGTACACACCCCACATACTGGGA AACCACAATGTCAACAACAATTGAGGATTATAAGCATGTGGATGATGTGATGATTGCACATTCTGGCCAATCAACAGTCA TCATCACAAGGTTTGGGGAAATTTTAAAGGCAGGCCCTTCCATCACACGGTTGGAAGAATCATGGACCATTGATGATGTT GCATTCAATGTTCCAGGCTTATCCATGGACTGCTTCATACCACCCAAGGAACTCCAGAAAGATTATCCACAAGAAGATCT AGATTGGAGGTCACCCTTACATAGATGA
CDS sequence (LotjaGi1g1v0743300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGGTGGTGGATGAGGTTGGAGGAGTCTCTGAAAAAGGGTGCTTTGTCATGTGGCAAATGGTCCCAGATAAGTGGCA GATTGAGCTGGTTGTGGCCGGCCACAAGGTTGTTGCTGGTTGCGACGGAACCGTCGCGTGGCGCCACACCCCTTGGCTCG GACCTCATGCCGCCAAAGGTGGTGGCGTGCGCCCTCTTCGTCGCGCTATTCAGGGACTAGACCCTTTGGCAGTGTCTGCT GTATTCGATGCTGCACAATACATGGGAGAAAAACAAATCTCAGGCATGGATTGTTTTGTGTTGAAGTTATCAGCTGATCA AACGGACTTAGTTGACCGCAGTGATAACACTGCAGAGATGATCAAGCATGTTACATTTGGTTACTTCAGCCAGAGAAATG GATTACTGGTTTATTTAGAAGACTCTTACTTGACAAGGATTCAATCACCTGGTACACACCCCACATACTGGGAAACCACA ATGTCAACAACAATTGAGGATTATAAGCATGTGGATGATGTGATGATTGCACATTCTGGCCAATCAACAGTCATCATCAC AAGGTTTGGGGAAATTTTAAAGGCAGGCCCTTCCATCACACGGTTGGAAGAATCATGGACCATTGATGATGTTGCATTCA ATGTTCCAGGCTTATCCATGGACTGCTTCATACCACCCAAGGAACTCCAGAAAGATTATCCACAAGAAGATCTAGATTGG AGGTCACCCTTACATAGATGA
Protein sequence (LotjaGi1g1v0743300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVVDEVGGVSEKGCFVMWQMVPDKWQIELVVAGHKVVAGCDGTVAWRHTPWLGPHAAKGGGVRPLRRAIQGLDPLAVSA VFDAAQYMGEKQISGMDCFVLKLSADQTDLVDRSDNTAEMIKHVTFGYFSQRNGLLVYLEDSYLTRIQSPGTHPTYWETT MSTTIEDYKHVDDVMIAHSGQSTVIITRFGEILKAGPSITRLEESWTIDDVAFNVPGLSMDCFIPPKELQKDYPQEDLDW RSPLHR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 234 | 229 | 6.0E-140 | – | |
| PANTHER | 6 | 234 | 229 | 6.0E-140 | ||
| Pfam | 8 | 226 | 219 | 6.9E-103 | ||
| Coils | 244 | 246 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0743300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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