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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006873
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We have found 24 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.423s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. Uncharacterized protein TCM_025023 [Theobroma cacao] gi|508717710|gb|EOY09607.1| chr0 131061644 131064877 -
n.a. Emb:CAB81597.1 [Theobroma cacao] gi|508726042|gb|EOY17939.1| chr0 155352476 155356357 +
n.a. Emb:CAB81597.1 [Theobroma cacao] gi|508726042|gb|EOY17939.1| chr0 192094007 192097572 +
n.a. Emb:CAB81597.1 [Theobroma cacao] gi|508726042|gb|EOY17939.1| chr1 33008404 33010966 -
n.a. Uncharacterized protein TCM_025023 [Theobroma cacao] gi|508717710|gb|EOY09607.1| chr1 57237987 57238838 -
n.a. Uncharacterized protein TCM_025023 [Theobroma cacao] gi|508717710|gb|EOY09607.1| chr1 57238093 57242472 -
n.a. Spindle assembly abnormal protein 6 [Theobroma cacao] gi|508699243|gb|EOX91139.1| chr2 27056735 27058345 +
n.a. Spindle assembly abnormal protein 6 [Theobroma cacao] gi|508699243|gb|EOX91139.1| chr2 27104723 27106333 +
n.a. Emb:CAB81597.1 [Theobroma cacao] gi|508726042|gb|EOY17939.1| chr2 36075711 36079328 -
n.a. C-type mannose receptor 2 [Theobroma cacao] gi|508722410|gb|EOY14307.1| chr3 11587231 11591601 +
n.a. Uncharacterized protein TCM_034018 [Theobroma cacao] gi|508722831|gb|EOY14728.1| chr5 696099 699522 +
n.a. Uncharacterized protein TCM_034747 [Theobroma cacao] gi|508723884|gb|EOY15781.1| chr5 2828499 2831976 +
n.a. Soluble secretory phospholipase A2 receptor [Theobroma cacao] gi|508706513|gb|EOX98409.1| chr5 30222190 30224973 -
n.a. lipase, putative (DUF620); TAIR: AT5G05840.1 replication factor C subunit, putative (DUF620); Swiss-Prot: sp|B4U9Q9|MRAY_HYDS0 Phospho-N-acetylmuramoyl-pentapeptide-transferase; TrEMBL-Plants: tr|C6TJ39|C6TJ39_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0083200 LjG1.1_chr1 11965279 11969702 +
n.a. lipase, putative (DUF620); TAIR: AT1G75160.1 DUF620 family protein (DUF620); Swiss-Prot: sp|P22814|RUNT_DROME Segmentation protein Runt; TrEMBL-Plants: tr|A0A151TC07|A0A151TC07_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0418600 LjG1.1_chr1 91221736 91223856 +
n.a. lipase (DUF620); TAIR: AT5G06610.1 lipase (DUF620); Swiss-Prot: sp|A2SDV6|PANB1_METPP 3-methyl-2-oxobutanoate hydroxymethyltransferase 1; TrEMBL-Plants: tr|I1NAZ2|I1NAZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0743300 LjG1.1_chr1 131694298 131699010 -
n.a. glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620); TAIR: AT5G06610.1 lipase (DUF620); Swiss-Prot: sp|P59273|Y2251_SHEON UPF0227 protein SO_2251; TrEMBL-Plants: tr|I1NAZ2|I1NAZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0743300 LjG1.1_chr1 131694750 131698857 -
n.a. lipase, putative (DUF620); TAIR: AT5G66740.1 spindle assembly abnormal protein (DUF620); Swiss-Prot: sp|Q6FG02|SYI_ACIAD Isoleucine--tRNA ligase; TrEMBL-Plants: tr|V7CHT1|V7CHT1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0391300 LjG1.1_chr2 88730037 88731880 -
n.a. glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620); TAIR: AT1G79420.1 C-type mannose receptor (DUF620); Swiss-Prot: sp|Q9LZW9|RTOR2_ARATH Regulatory-associated protein of TOR 2; TrEMBL-Plants: tr|A0A151SWC6|A0A151SWC6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0132500 LjG1.1_chr3 16593332 16598256 +
n.a. lipase, putative (DUF620); TAIR: AT1G75160.1 DUF620 family protein (DUF620); Swiss-Prot: sp|Q47LE7|NUOD_THEFY NADH-quinone oxidoreductase subunit D; TrEMBL-Plants: tr|A0A072VF85|A0A072VF85_MEDTR DUF620 family protein; Found in the gene: LotjaGi5g1v0017500 LjG1.1_chr5 3466030 3469531 -
n.a. glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620); TAIR: AT3G19540.1 glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620); Swiss-Prot: sp|B3PC08|GATA_CELJU Glutamyl-tRNA(Gln) amidotransferase subunit A; TrEMBL-Plants: tr|A0A0L9V1J6|A0A0L9V1J6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0031900 LjG1.1_chr5 5288501 5292398 +
n.a. lipase (DUF620); TAIR: AT5G06610.1 lipase (DUF620); Swiss-Prot: sp|Q4A8J1|KAD_MYCH7 Adenylate kinase; TrEMBL-Plants: tr|K7K8X0|K7K8X0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0114600 LjG1.1_chr5 23378392 23381767 +
n.a. glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620); TAIR: AT3G19540.1 glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620); Swiss-Prot: sp|B3PC08|GATA_CELJU Glutamyl-tRNA(Gln) amidotransferase subunit A; TrEMBL-Plants: tr|A0A0L9U0F0|A0A0L9U0F0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0325000 LjG1.1_chr5 64285662 64289325 -
n.a. lipase, putative (DUF620); TAIR: AT5G05840.1 replication factor C subunit, putative (DUF620); Swiss-Prot: sp|Q9BY64|UDB28_HUMAN UDP-glucuronosyltransferase 2B28; TrEMBL-Plants: tr|I1LML7|I1LML7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0068800 LjG1.1_chr6 13187394 13196107 -