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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0774200 |
| Transcript ID | LotjaGi1g1v0774200.3 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dehydrogenase; TAIR: AT1G54870.2 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9FZ42|GRDH1_ARATH Glucose and ribitol dehydrogenase homolog 1; TrEMBL-Plants: tr|I3SGZ5|I3SGZ5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0774200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:134664750..134669358) extracted from Lotus japonicus Gifu genome v1.2.
CTCAAAAGCACTGATCTTAGACACATTCTTATAAGTGATATCATGTGTTGTCTGGTTTGATTATTTCTGGTATGAGCCAC TCCCACACCTGTTCTTGATCTTTCCTTTCTTCATTTCTTAGTTCAGAGAAGCCAGAAGAGATTTCTAAATGATATTTGAC AATTGTGGTGAAGTGATGACAGTTTCAAGGTCTCAAATGGGGTGTGTCTTCCTGATATTATTAAGCATTTTGGTTTTGAA CCATGAAGTATTGGGTGCTAGGTTAGGAAAAGTGGAACATGTACACAAACTCATGCCTCCAGTATGGAGGAAAAGCTTTA CCAGTGAAACTGATAGAAGCTATTACACAACAAGTAAAAGAGCAGTACCCTCCTCTCCTGACCGCTTGCACAACAGATAG GTAATTCTATCCTTCTAGCAATTGAATTCTCTGTCCTTTCAACAGAGATTACTTAGCATGTGATCAATAACGAGTTTTTT CCTGGGAAAAGCGAGTTTGAGTGCATACACCCATGCTATATGTTTATAATTATTATTTCTTCAATCAAATCACTGCTAAA TAACAGAATCCAGCAGTTTGAAGTTTCATTAGATGTTTGGTCAGCAGCTTTTTCAAGAATCAATTCTGAGCCGCAAAAGC TATGCTACTCACAGAAGAGTTAAAAGTCCAAAGCTACTCAGATAAGTTTCTTCTTGATTCAATCATCAATCCTGAGACGC AGAAACTAATCTACTCATATGAAAGTCGAAATCCAGCAGCCTATCACAGGAACTTTTTTCTAAAAGCTACTCATTAAAGC TTCTTCATAGAAGAAGTTGATTCTATCTTTGGAATCATAAGAATTTTCAAACATGCACTCACATCGATTAGGGTTTAGTG AGTAAAGATATATTGTTCAAGTTATATGGTTTAAAGGTGTAATATTTGAGTGGTAACTTTTCACCTCACTTTTATTATAC TCTCTTCCCATTTCTATTGCTTTTCCCTTTTATCACACTCACCTCAAGCTATGTAAATGTGTAAATGCAGTACAATAGAA ATGAATCACACTGATTATAGTACAAGGGTTAGATATATAAATAACACCAGACACAATTTAGTTCCTAATTAAGTCCACAC TACATTACATTTTCACAAAAGGGAGGAAGAAAGAAAGTGCTCAATATAAGTAGTTAATCAGCAGAACCAACAAAGCCAAG AGCAAAAACTCAACCCCAGCATGCAAAGTAGATGCATCAGCAGCGAAAGTTCCAGTGGGTGTGTTGGTAGTGAGAACAAG CACCATCCAATCATCCTCTGAGCCAAGCCCTGCACCTGTGTACTTGGAATTGTTAAGATACTTAGCATACACATCAGAAT GAGTGTAGTTGGAAAGCACAACAGTGGGTTCCAATTTGGCCACACAAACTGGGAGAATGACCCCATCACTTGTGGTGGTG ATGTTGATGTCACATTTATCAATGTGCTTCTGCAATTTTGGGATTTGCATGCTCCCACCAGGGTAGTATTGACTCACTTG TTCACATGGTATGTCTTCCATTTCTTCTGCTATCTCATCTGCTAAACAATATGCCTTGGGAACACGGTTCAGGGGTGAAA GGTTCTTAGTCTGCCTGAAGCTATTGATTCCCTTGTATACACTATCCACCTCATCTATCAATGAAGCACATGTGTAACAT CATTAATAATAGTATATTAACTACTGAAACCAACACAAGAAGCAACTATATTATGTAATATGATTCAAGTAACTGAGACT AAGGAGAGTTTTGGAAGATAAAGTACCTTTGCACTGAGTTGGAGTAGAAAGAAAGAGGAAAGCAAAGACACATGCAAGAA GGAAGAAACCAAGTTTGAAGGATGCCATGGTGAGCTTAATGTGAGTCGTAATGGCAAACCACCACACGTTTTTAATGAAT TAGACTTGATAACAAGGGATAAACAAAAATGGGTTCCTAGAGTAATGACAGGTATAAAGTTCATCTTCCACGTGGTTGAC ATGCATGCAAGTAACCAGATAACACAGCAAAGAAACATTTTGAATTAAATAAGAGAACAAGGTTGCTAGTTTGAAGTGTT TTCTAGATTATAACAAGTTAGATTCTGTGACTGGAAAATTCTATCCTACACCAAATGGCTGATGGCAGGAATGTCCTAAA TAACACATGTCATCTCTCTAGTATAGAAATTAATACGCCTATCTGTCATCATGTGTAGTATAAGTGGATCAATCTCATAG GTATGCAAGCTTTGAATATACCCTTATCAGCATGGGAATGTACCTATATTATCTGTGACAAGTCATCCAAATACCCTAAA AACTAATGACTAGTATTTAATTGAGTACTTTCCTCATCCTTGAATACTATAGCAGAATATATCCTCCTATCCTATGGAAG ATAGCTTTTAGGAGAGTTATAATCCATTGTAAACAAACAAACAGTGAGTAAATTTCATATTAGTGTACCAAATGATGACC GTGTCCAAAACCAACAAGGAAGCTGCACTCAAAACCAATCCTTGTTTTGATTCAATGTGCCCTTTTCTACAGATGTGTCC TCTGCATGTGATGAATATGACACGTCAAACACCTCCTTCTGCCACTCATCACCGCGTGGCATGTTCAACTTCTTCACAAA CAACATGTGTATCTGGATGCAATCATCATCATACACACACAACTATCAGCAATGTGCCCCACTACTATATCTTTACCCCA CACAACATCTTAAAAAGCATCCTCCATATCTTGCATTCACTTCAACATCCACAGCAGAAACCACATTTTCAGCCTCAGGA GATTTCCAAAAAGCATTTTGGTGAGCATGGCTTCTGGTGGACAGAAATTCCCCCCTCAGAAGCAAGAGACACAACCTGGC AAAGAACATGCCTTGAATCCAACACCCCAATTCACCAGCCCAGAGTATAAACCATCAAATAAACTTCAAGTACATATATA TAATAACACCCTTTCTCTATACATGACCAAATTTCTACATTAACTGCTTGCATTATTTAAAATTATTTCTTTCCACTCCC TCAATTTCGTAAGTTCTATATTGTGGGTTAATTTTCAGGGGAAGATAGCATTAATCACTGGTGGTGACTCTGGAATTGGA AGAGCAGTGTGCAATTTATTTGCATTAGAGGGTGCAACTGTGATTTTCACCTATGTGAAGGGACAAGAGGACAAGGATGC GAGGGACACTATTGAAATGATAAAAAGGGCTAAGACTGCAGATGCTAAAGATCCACTGGCTATACCAGCTGACCTTGGTT TTGATGAGAACTGCAAGAGAGTGGTGGATGAGGCAGTGAATGCTTATGGCCGCATAGATATTCTGGTCAACAATGCAGCT GAGCAGTATGAGTGTGGTTCAGTGGAGGAGATTGATGAGCCAAGACTTGAGAGGGTGTTCAGAACTAACATCTTCTCATA TTTCTTCCTGACCAGGTAAAATCAAAATGGATTCAACTAAAAGTTGAAACAACATAGATATTTATCATTCACTAGCGGGG TTAAAATAAACTAAATCAAGCATATACTAACCTTCAACTCAATCTATGAAAAGAGTTTACTTCATTTTGTCTTGTATGAT TTTTAAGTTTAACTAACTTGTATATTTGTATAGGCATGCCCTGAAGCATATGAAGGAAGGAAGCAGCATTATCAACACAA CATCAGTGAATGCATACAAGGGACACCCTACATTACTGGACTACACTGCCACCAAGGGTGCCATTGTGGCCTTTACCAGG GGCCTTTCCCTTCAGCTTGTGAGCAAGGGAATAAGAGTGAATGGGGTTGCACCTGGACCCATATGGACTCCATTGATACC AGCCTCTTTCAAGGAGGAAGAAACTGCTCAATTTGGTGCTGATGTGCCAATGAAAAGAGCTGGCCAGCCTGTTGAGGTTG CCCCCTCCTATGTGTTTCTTGCCTGCAACCAGTGCTCCTCCTACATAACTGGCCAAGTCCTCCACCCCAACGGTGATGCA TACAAATACAATGATACTTTATACATAATGTGCATGTTTGGAAACTCTTTCAAAAACCACTTTAAAACTAAAATCACGGT GGCTTCTGTCCATCATGAATTGAATGAGTTTCCAAATAATGCTATTTTATACCAGAATCAAGTGTTTGTTGTCTGGTTTT GCTAACAATTTTGTTATTTTTCAGGTGGAAACGTGGTGAATGGGTGATGAGGATGACTCATGCAGAAGTTGAAATCGATA TCATATGTAACCGGTTTTGTGGTTCTTTGTGTACCTAAACTGTGTAAAGAATGGCAAAAAAGCAGTTATCATAGCGCTCT ATATGAGAGAATATGTAGCACCCCAGCTCTTCTGTAGTTTTGCTTTTGAATGTAAAAACCTTGAGAAATAAGAAACTAAT AAATATACCAGTTCTTTTGCTAAAGTATGTTTTAAATAAAACTGAAGTGTGGATATGTGACTTTGTATCGTCATAATACT AATACATGTTTGAAAACTCATTCAGAACTCAGAATCAATTTTAGTGTGGTTATGTGACTTTGTATCGTCATACATGTGAA AATTTTTGAAATAGTCAAATCTGGTGGACTTCCATAAATTTTAACGAAA
CDS sequence (LotjaGi1g1v0774200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTGGTGGACAGAAATTCCCCCCTCAGAAGCAAGAGACACAACCTGGCAAAGAACATGCCTTGAATCCAACACC CCAATTCACCAGCCCAGAGTATAAACCATCAAATAAACTTCAAGGGAAGATAGCATTAATCACTGGTGGTGACTCTGGAA TTGGAAGAGCAGTGTGCAATTTATTTGCATTAGAGGGTGCAACTGTGATTTTCACCTATGTGAAGGGACAAGAGGACAAG GATGCGAGGGACACTATTGAAATGATAAAAAGGGCTAAGACTGCAGATGCTAAAGATCCACTGGCTATACCAGCTGACCT TGGTTTTGATGAGAACTGCAAGAGAGTGGTGGATGAGGCAGTGAATGCTTATGGCCGCATAGATATTCTGGTCAACAATG CAGCTGAGCAGTATGAGTGTGGTTCAGTGGAGGAGATTGATGAGCCAAGACTTGAGAGGGTGTTCAGAACTAACATCTTC TCATATTTCTTCCTGACCAGGCATGCCCTGAAGCATATGAAGGAAGGAAGCAGCATTATCAACACAACATCAGTGAATGC ATACAAGGGACACCCTACATTACTGGACTACACTGCCACCAAGGGTGCCATTGTGGCCTTTACCAGGGGCCTTTCCCTTC AGCTTGTGAGCAAGGGAATAAGAGTGAATGGGGTTGCACCTGGACCCATATGGACTCCATTGATACCAGCCTCTTTCAAG GAGGAAGAAACTGCTCAATTTGGTGCTGATGTGCCAATGAAAAGAGCTGGCCAGCCTGTTGAGGTTGCCCCCTCCTATGT GTTTCTTGCCTGCAACCAGTGCTCCTCCTACATAACTGGCCAAGTCCTCCACCCCAACGGTGGAAACGTGGTGAATGGGT GA
Protein sequence (LotjaGi1g1v0774200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASGGQKFPPQKQETQPGKEHALNPTPQFTSPEYKPSNKLQGKIALITGGDSGIGRAVCNLFALEGATVIFTYVKGQEDK DARDTIEMIKRAKTADAKDPLAIPADLGFDENCKRVVDEAVNAYGRIDILVNNAAEQYECGSVEEIDEPRLERVFRTNIF SYFFLTRHALKHMKEGSSIINTTSVNAYKGHPTLLDYTATKGAIVAFTRGLSLQLVSKGIRVNGVAPGPIWTPLIPASFK EEETAQFGADVPMKRAGQPVEVAPSYVFLACNQCSSYITGQVLHPNGGNVVNG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 292 | 292 | 9.6E-181 | – | |
| MobiDBLite | 1 | 37 | 37 | - | – | |
| PANTHER | 1 | 292 | 292 | 9.6E-181 | – | |
| Gene3D | 4 | 291 | 288 | 2.2E-81 | – | |
| CDD | 17 | 292 | 276 | 6.66294E-167 | – | |
| SUPERFAMILY | 41 | 290 | 250 | 6.04E-75 | ||
| PRINTS | 44 | 61 | 18 | 2.6E-37 | ||
| Pfam | 52 | 288 | 237 | 3.5E-54 | – | |
| PRINTS | 125 | 136 | 12 | 2.6E-37 | ||
| PRINTS | 125 | 136 | 12 | 3.6E-9 | ||
| PRINTS | 171 | 187 | 17 | 2.6E-37 | ||
| PRINTS | 177 | 185 | 9 | 3.6E-9 | ||
| ProSitePatterns | 184 | 212 | 29 | - | ||
| PRINTS | 197 | 216 | 20 | 3.6E-9 | ||
| PRINTS | 197 | 216 | 20 | 2.6E-37 | ||
| PRINTS | 218 | 235 | 18 | 2.6E-37 | ||
| PRINTS | 252 | 272 | 21 | 2.6E-37 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
Expression pattern of LotjaGi1g1v0774200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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