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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0006300 |
| Transcript ID | LotjaGi2g1v0006300.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Annexin; TAIR: AT1G68090.1 annexin 5; Swiss-Prot: sp|Q9C9X3|ANXD5_ARATH Annexin D5; TrEMBL-Plants: tr|A0A151QYP8|A0A151QYP8_CAJCA Annexin; Found in the gene: LotjaGi2g1v0006300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:2192454..2193855) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTCATAAAGATCTTCAGTGAAAGAAGCAGCACACATTTGGCTGCTGTTGACTCTGCTTACAGAGCTCAACATGGAAA CACACTTGAAAAGGTATTCTTACAATCAAGAATTGACCTTCCTTGATTTTTTCCTCTTTGTTGTTTGTTCACAATCCAAC TCATCTTTCTTATGAAGGCACTAAAGAAAGAAACCTCTGGTAGTTTTTTGAGAGGCCTCTTGACCATACTACGTTGTGCT ACTAACCCTGCTATGTACTTTGCTAAGGTATTTTTTGTTCTTAGTTTTACATCTTCAAAATTTCTAATTGGTTTCTCATG CTCCTTCTAATTATTTCTTTGCCATTGGTTGTTGTTCTTTTTGAATAGTTTTCTACTGAATGTCTAGGGATGATCAAGAT TTTATGTTCTCAATTGGTCCCAATTTCCTGTCCTGCAAATAAAATTGTGTCATGTTGAATAAAAAACACATGACTAAGGT AGTTATAAACTTATATGATAGTTTTTAATTGGTGAGTATACACTTTATTGGTGGGACAGAGAATGAAGTACAATTTGGGG ACAAAAGATTTCAACCCGTCTATGAAGTGAAAAGTTATATACTCTAACCTTTTTGGGTCGAGTTTGGAAAAGTTTATTTA AACTTATCTTATAACATACTTATAAAAATAGATTATGACCTACCTACAAGATGTTTTGAGCTTGTTTTCATAAACTATTT GATTAGCTGAAAAATAGGGCCTATAAGATGTTTTGAGTTCACTTCAATAAGCTTCTTAAATTGACTTATGAATAAGTATT CATGTGATAAACGTTTATTGCTCTAATTTGAGTTTATTTCAATAAGTTTCTTAAATTAGCTTATGAATAAGTATTAATGT GATAAATGTTTATTTCTATAAGTTCTTACTTAATTTTTTTTCCCAAGCACACCCTTAGTCTTACTAGAAAAATACAATCT TGTCCTTTGAATATTTTCATGATGAACACCACAATTGAAGATTTCTCGGATGTTCTGTTTTCCCTTTCCCTCTGTTATTT ACTGGTACATTATACAACTTTCATTTTCATTAGTCATATACCTCTTGTAATATTGTTACATTTTTTAAGAAAAAATTAAA AGTTATGAACTTATGATATGTTTTATCTACTTATGTCTATGACATAAGGCTTGACGCTTATATCCTTATCTTTTGCAGAT TTTGCACAAGTCAATGAAGGGTATGGGAACTGATGATAGTAGACTAATAAGGGTAATTGTGACCAGGACTGAGATTGACA TGCAACACATAAAAGCAGCATATTATAGTAAATATGGAAAACCACTAACTCATGCTGTTCGTTCAGACACATCAGGCAGT TATAAAGACTTTCTATTACATCTTTTAGGCACTGATTATTAG
CDS sequence (LotjaGi2g1v0006300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCATAAAGATCTTCAGTGAAAGAAGCAGCACACATTTGGCTGCTGTTGACTCTGCTTACAGAGCTCAACATGGAAA CACACTTGAAAAGAAAGAAACCTCTGGTAGTTTTTTGAGAGGCCTCTTGACCATACTACGTTGTGCTACTAACCCTGCTA TGTACTTTGCTAAGATTTTGCACAAGTCAATGAAGGGTATGGGAACTGATGATAGTAGACTAATAAGGGTAATTGTGACC AGGACTGAGATTGACATGCAACACATAAAAGCAGCATATTATAGTAAATATGGAAAACCACTAACTCATGCTGTTCGTTC AGACACATCAGGCAGTTATAAAGACTTTCTATTACATCTTTTAGGCACTGATTATTAG
Protein sequence (LotjaGi2g1v0006300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFIKIFSERSSTHLAAVDSAYRAQHGNTLEKKETSGSFLRGLLTILRCATNPAMYFAKILHKSMKGMGTDDSRLIRVIVT RTEIDMQHIKAAYYSKYGKPLTHAVRSDTSGSYKDFLLHLLGTDY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 45 | 45 | 8.1E-7 | ||
| PANTHER | 1 | 125 | 125 | 1.3E-67 | – | |
| ProSiteProfiles | 1 | 47 | 47 | 8.894 | – | |
| PANTHER | 1 | 125 | 125 | 1.3E-67 | – | |
| Gene3D | 1 | 51 | 51 | 9.2E-10 | ||
| SMART | 1 | 45 | 45 | 0.11 | ||
| SUPERFAMILY | 2 | 124 | 123 | 3.67E-44 | ||
| ProSiteProfiles | 51 | 122 | 72 | 29.426 | – | |
| Gene3D | 52 | 123 | 72 | 1.2E-30 | ||
| Pfam | 55 | 120 | 66 | 6.9E-24 | ||
| PRINTS | 65 | 87 | 23 | 1.2E-5 | ||
| ProSitePatterns | 68 | 120 | 53 | - | ||
| SMART | 68 | 120 | 53 | 4.1E-21 | ||
| PRINTS | 105 | 121 | 17 | 1.2E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Calcium-dependent phospholipid binding | Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium. |
Expression pattern of LotjaGi2g1v0006300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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