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LotjaGi2g1v0251000.2

Overview

Field Value
Gene ID LotjaGi2g1v0251000
Transcript ID LotjaGi2g1v0251000.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Enhanced disease susceptibility 1; TAIR: AT5G14930.2 senescence-associated gene 101; Swiss-Prot: sp|Q4F883|SG101_ARATH Senescence-associated carboxylesterase 101; TrEMBL-Plants: tr|A0A0B2Q8K0|A0A0B2Q8K0_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0251000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:71662490..71665560

We have encountered an error when attempting to retrieve your sequence: Unable to fetch BLAST database metadata.

CDS sequence (LotjaGi2g1v0251000.2

We have encountered an error when attempting to retrieve your sequence: Unable to fetch BLAST database metadata.

Protein sequence (LotjaGi2g1v0251000.2

We have encountered an error when attempting to retrieve your sequence: Unable to fetch BLAST database metadata.

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR46898
3 573 571 5.7E-212 –
Gene3D
G3DSA:3.40.50.1820
20 261 242 5.3E-16
IPR029058
SUPERFAMILY
SSF53474
39 212 174 3.59E-15
IPR029058
Pfam
PF01764
115 211 97 5.0E-17
IPR002921
Coils
Coil
345 365 21 - –
Pfam
PF18117
357 461 105 2.9E-35
IPR041266
Coils
Coil
490 517 28 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006629
Biological process Lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
Subterm of

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Expression data