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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002921
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 103 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 5.584s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0047159.1
n.a. PREDICTED: GDSL esterase/lipase At4g10955-like [Glycine max] gi|356495719|ref|XP_003516721.1| chr0 15720464 15722111 +
2 domain predictions
1 GO term
Lj0g3v0055849.1
n.a. PREDICTED: phospholipase A1-Ibeta2, chloroplastic-like [Cicer arietinum] gi|502152496|ref|XP_004508952.1| chr0 18122643 18124620 +
2 domain predictions
1 GO term
Lj0g3v0111429.1
n.a. Feruloyl esterase A [Medicago truncatula] gi|357437791|ref|XP_003589171.1| chr0 48393053 48398490 -
2 domain predictions
1 GO term
Lj0g3v0111429.2
n.a. Feruloyl esterase A [Medicago truncatula] gi|357437791|ref|XP_003589171.1| chr0 48393795 48398490 -
2 domain predictions
1 GO term
Lj0g3v0111429.3
n.a. Feruloyl esterase A [Medicago truncatula] gi|357437791|ref|XP_003589171.1| chr0 48393954 48398490 -
2 domain predictions
1 GO term
Lj0g3v0130359.1
n.a. PREDICTED: phospholipase A1-Igamma1, chloroplastic-like [Fragaria vesca subsp]. vesca] gi|470107121|ref|XP_004289898.1| chr0 59109336 59111072 +
2 domain predictions
1 GO term
Lj0g3v0197899.1
n.a. PREDICTED: phospholipase A1-Igamma2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502109882|ref|XP_004493749.1| chr0 96425057 96425525 +
2 domain predictions
1 GO term
Lj0g3v0250729.1
n.a. PREDICTED: phospholipase A(1) DAD1, chloroplastic-like [Glycine max] gi|356529979|ref|XP_003533563.1| chr0 129974030 129974503 -
2 domain predictions
1 GO term
Lj0g3v0269609.1
n.a. PREDICTED: phospholipase A1-Igamma1, chloroplastic-like [Glycine max] gi|356500145|ref|XP_003518894.1| chr0 139677064 139680294 -
2 domain predictions
1 GO term
Lj0g3v0282629.1
n.a. PREDICTED: phospholipase A(1) DAD1, chloroplastic-like [Glycine max] gi|356567000|ref|XP_003551712.1| chr0 146520304 146521593 -
2 domain predictions
1 GO term
Lj0g3v0327069.1
n.a. Lipase class 3 family protein [Theobroma cacao] gi|508701884|gb|EOX93780.1| chr0 170976341 170983966 -
2 domain predictions
1 GO term
Lj0g3v0327069.2
n.a. Lipase class 3 family protein [Theobroma cacao] gi|508701884|gb|EOX93780.1| chr0 170976341 170983966 -
2 domain predictions
1 GO term
Lj1g3v0416340.1
n.a. enhanced disease susceptibility 1 protein [Solanum tuberosum] gi|50841444|gb|AAT84084.1| chr1 5704426 5708835 +
2 domain predictions
1 GO term
Lj1g3v0416350.1
n.a. EDS1-2 [Glycine max] gi|288310310|gb|ADC45394.1| chr1 5706400 5709608 +
2 domain predictions
1 GO term
Lj1g3v0416380.1
n.a. EDS1-2 [Glycine max] gi|288310310|gb|ADC45394.1| chr1 5719034 5722293 +
2 domain predictions
1 GO term
Lj1g3v4451550.1
n.a. PREDICTED: phospholipase A1-Igamma2, chloroplastic-like isoform X2 [Cicer arietinum] gi|502109887|ref|XP_004493750.1| chr1 52253638 52255726 +
2 domain predictions
1 GO term
Lj1g3v4863020.1
n.a. Triacylglycerol lipase [Medicago truncatula] gi|357511327|ref|XP_003625952.1| chr1 58892713 58894148 -
2 domain predictions
1 GO term
Lj1g3v4863030.1
n.a. Triacylglycerol lipase [Medicago truncatula] gi|357511327|ref|XP_003625952.1| chr1 58893347 58896454 -
2 domain predictions
1 GO term
Lj1g3v4863030.2
n.a. Triacylglycerol lipase [Medicago truncatula] gi|357511327|ref|XP_003625952.1| chr1 58893347 58896454 -
2 domain predictions
1 GO term
Lj1g3v5034660.2
n.a. triacylglycerol lipase 1 [Arachis hypogaea] gi|324329841|gb|ADY38373.1| chr1 61485602 61492060 +
2 domain predictions
1 GO term
Lj1g3v5061280.1
n.a. triacylglycerol lipase [Ricinus communis] gi|300119936|gb|ADJ67993.1| chr1 62063683 62066459 -
2 domain predictions
1 GO term
Lj2g3v0371580.1
n.a. Calmodulin-binding heat shock protein [Medicago truncatula] gi|357443977|ref|XP_003592266.1| chr2 5888964 5893586 -
2 domain predictions
1 GO term
Lj2g3v0371580.2
n.a. Calmodulin-binding heat shock protein [Medicago truncatula] gi|357443977|ref|XP_003592266.1| chr2 5888964 5893586 -
2 domain predictions
1 GO term
Lj2g3v1019980.1
n.a. SAG101 [Medicago truncatula] gi|357496089|ref|XP_003618333.1| chr2 15871005 15874895 +
2 domain predictions
1 GO term
Lj2g3v1020000.1
n.a. SAG101 [Medicago truncatula] gi|357496089|ref|XP_003618333.1| chr2 15879669 15886464 +
2 domain predictions
1 GO term
Lj2g3v1020000.2
n.a. SAG101 [Medicago truncatula] gi|357496089|ref|XP_003618333.1| chr2 15879669 15907994 +
2 domain predictions
1 GO term
Lj2g3v1020000.3
n.a. SAG101 [Medicago truncatula] gi|357496089|ref|XP_003618333.1| chr2 15879669 15882496 +
2 domain predictions
1 GO term
Lj2g3v1705500.1
n.a. Mono-/di-acylglycerol lipase [Theobroma cacao] gi|508714701|gb|EOY06598.1| chr2 26348538 26353458 -
2 domain predictions
1 GO term
Lj2g3v1879760.1
n.a. Lipase [Medicago truncatula] gi|357482893|ref|XP_003611733.1| chr2 28008017 28018542 +
2 domain predictions
1 GO term
Lj2g3v1989130.1
n.a. PREDICTED: phospholipase A1-Ibeta2, chloroplastic-like [Glycine max] gi|356497107|ref|XP_003517405.1| chr2 29756496 29759073 -
2 domain predictions
1 GO term
Lj3g3v2330760.1
n.a. Calmodulin-binding heat shock protein [Medicago truncatula] gi|357443977|ref|XP_003592266.1| chr3 29197945 29205416 +
2 domain predictions
1 GO term
Lj3g3v2576660.1
n.a. Mono-/di-acylglycerol lipase isoform 1 [Theobroma cacao] gi|508780025|gb|EOY27281.1| chr3 31820926 31826958 +
2 domain predictions
1 GO term
Lj4g3v2826710.1
n.a. PAD4, partial [Medicago truncatula] gi|357520071|ref|XP_003630324.1| chr4 37849228 37852870 -
2 domain predictions
1 GO term
Lj4g3v2826720.1
n.a. PAD4 [Populus trichocarpa] gi|224083496|ref|XP_002307051.1| chr4 37849536 37855696 -
2 domain predictions
1 GO term
Lj4g3v3004150.1
n.a. PREDICTED: GDSL esterase/lipase At4g10955-like isoform X1 [Cicer arietinum] gi|502139013|ref|XP_004503613.1| chr4 39888741 39891938 +
2 domain predictions
1 GO term
Lj5g3v1015360.1
n.a. PREDICTED: phospholipase A1-Igamma1, chloroplastic-like [Glycine max] gi|356500145|ref|XP_003518894.1| chr5 16736565 16741548 +
2 domain predictions
1 GO term
Lj5g3v1051320.2
n.a. Alpha/beta-Hydrolases superfamily protein [Theobroma cacao] gi|508702604|gb|EOX94500.1| chr5 17144283 17152082 -
2 domain predictions
1 GO term
Lj5g3v1600770.1
n.a. Lipase [Medicago truncatula] gi|357442301|ref|XP_003591428.1| chr5 23223459 23227322 -
2 domain predictions
1 GO term
Lj5g3v1999190.1
n.a. Calmodulin-binding heat shock protein [Medicago truncatula] gi|357443977|ref|XP_003592266.1| chr5 28124931 28129403 -
2 domain predictions
1 GO term
Lj5g3v2302860.1
n.a. Sn1-specific diacylglycerol lipase [Medicago truncatula] gi|357445141|ref|XP_003592848.1| chr5 34075662 34085925 -
2 domain predictions
1 GO term
Lj5g3v2302860.2
n.a. Sn1-specific diacylglycerol lipase [Medicago truncatula] gi|357445141|ref|XP_003592848.1| chr5 34075662 34085925 -
2 domain predictions
1 GO term
Lj6g3v0098540.1
n.a. Triglyceride lipases,triglyceride lipases isoform 1 [Theobroma cacao] gi|508713587|gb|EOY05484.1| chr6 1216757 1233486 -
2 domain predictions
1 GO term
Lj6g3v0098540.2
n.a. Triglyceride lipases,triglyceride lipases isoform 1 [Theobroma cacao] gi|508713587|gb|EOY05484.1| chr6 1216757 1233486 -
2 domain predictions
1 GO term
Lj6g3v0423720.1
n.a. calmodulin-binding heat-shock protein [Nicotiana tabacum] gi|1087073|gb|AAB34987.1| chr6 3955853 3959620 +
2 domain predictions
1 GO term
Lj6g3v0423720.2
n.a. calmodulin-binding heat-shock protein [Nicotiana tabacum] gi|1087073|gb|AAB34987.1| chr6 3955853 3959620 +
2 domain predictions
1 GO term
Lj6g3v1918350.1
n.a. PREDICTED: lipase-like isoform X1 [Cicer arietinum] gi|502078774|ref|XP_004486050.1| chr6 21787066 21792513 -
2 domain predictions
1 GO term
Lj6g3v1995890.1
n.a. PREDICTED: phospholipase A1-IIgamma-like [Glycine max] gi|356557730|ref|XP_003547164.1| chr6 23185855 23188410 +
2 domain predictions
1 GO term
LotjaGi1g1v0184900.1
n.a. Enhanced disease susceptibility 1 protein; TAIR: AT3G48090.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9XF23|EDS1L_ARATH Protein EDS1L; TrEMBL-Plants: tr|A0A072V056|A0A072V056_MEDTR Enhanced disease susceptibility protein; Found in the gene: LotjaGi1g1v0184900 LjG1.1_chr1 36179223 36184248 +
2 domain predictions
1 GO term
LotjaGi1g1v0185000.1
n.a. Enhanced disease susceptibility 1; TAIR: AT3G48090.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9XF23|EDS1L_ARATH Protein EDS1L; TrEMBL-Plants: tr|A0A151RWT3|A0A151RWT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0185000 LjG1.1_chr1 36193685 36197247 +
2 domain predictions
1 GO term
LotjaGi1g1v0713500.1
n.a. Phospholipase A1; TAIR: AT1G06800.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q941F1|PLA15_ARATH Phospholipase A1-Igamma1, chloroplastic; TrEMBL-Plants: tr|I1JNZ4|I1JNZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0713500 LjG1.1_chr1 128151124 128162403 -
2 domain predictions
1 GO term