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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0300100 |
| Transcript ID | LotjaGi2g1v0300100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Argonaute family protein; TAIR: AT1G69440.1 Argonaute family protein; Swiss-Prot: sp|Q9C793|AGO7_ARATH Protein argonaute 7; TrEMBL-Plants: tr|D3GBV1|D3GBV1_LOTJA Reduced leaflet 3; Found in the gene: LotjaGi2g1v0300100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77445026..77447845) extracted from Lotus japonicus Gifu genome v1.2.
AAGGAATCCTTTAAAGGAGATGATGGGAGGAAACTCATTCCAACAAGGAAGCAACAGGACTTAATTGTTGCAAGGAGGCC AGACTCAGGTGGAAAAGAAGGTTCTGTGATCTCTCTCCTTGCCAACCACTTTTTGGTGCAGTTTGATCCATCCCAAAAAA TTTATCATTACAATGTTGAAATTACTCCTCATCCCTCCAAGGATGTGGCAAGGGAAATCAAACAGAAATTGGTAAATAAC AATTCTGCTATGCTCTCGGGTGCTCTGCCGGCATATGATGGGAGACAGAATCTTTACAGTTCAATTGAATTCCAAAACGA TAAGCTTGAGTTCTACATTAGCCTCCTAATCCCAACAAGCAAACTGACTTCACCTTATGGAGAAATGTATGACTTGAAGG AGAAGAAAGAACAGCATAAACTGTTCCGGATAAATATCAAACTAGTCTCAAAGATTGATGGGAAGGAGTTAACTAACTAC TTGAGCAAAGAGGGTGATGAATGGATTCCACTTCCACAGGATTATCTACATGCTTTGGATGTAGTTCTGAGGGAAAGCCC GACTGAGAAATGCATACCTGTAGGGAGATCATTCTACTCAAATTCAATGGGAAGAAGCAAAGACATTGGGGGAGGAGCTG TGGGATTGAGGGGATTCTTTCAGAGTCTTCGACCGACCCAACAAGGACTTGCTCTCAATCTCGATTTCTCAGTAACTGCA TTCCATGAGAGTATAGGAGTGATTTCATACTTGCAGAAACGCCTCGAGTTTCTTCGAGACCTTTCTCAAAGGAAGACAAC TCAATTAACTTGTGAAGAAAGGAAGGAAGTGGAGAAGGCACTGAAGAACATCAGGGTCTTTGTTTGCCACAGAGAAACAG TTCAGAGATACCGTGTCTACGGCTTAACTGAGGAGGCTACTGAAAATCTTTGGTTTGCTGACAGGGATGGACAGAATCTG AGGCTTGTGAATTACTTCAAAGATCACTATAACTACGACATACAATTCCGAAAATTGCCATGCTTGCAGATTAGTAGGAG TAAACCTTGTTATCTTCCTATGGAGCTTTGTGTGATCTGCGAAGGCCAGAAATTCCTCGGGAAACTGTCGGATGATCAGA CAGCAAGAATACTCAAGATGGGCTGCCAAAGACCAGGAGAACGAAAAACCATCATCGAAGGAGTCATGAGAGGAAATGTT GGGTCTACCAGGTAACAAGATACAATAGTTGTTTCACTTTATTGAACATTGTGTATAATCTTGTACATTATTACTATGGA GCATTTGCTTTCTTTCTTTTTCATGTTTATGTTGTTTTGGTTTCTAATGCCTTAAAAGTAAAATCCTTTTGACAGTGGTG AGCAGGAAAGAGAATTCAAACTCCAAGTCTCAAGAGAAATGACAAAGTTGACTGGGAGAATTCTTCACCCTCCCAAACTA AAGCTTGGAGATGGAGGTCATGTGAGAAACCTTACTCCTTCACGCCATGACCGTCAGTGGAACCTTCTAGATGGCAATGT CTTTGAAGGAACTACAATTGAAAGGTGGGCACTTGTAAGCTTTGGGGGCACCCCTGAGCAGAAGTCTAATATCCCTAGAT TCATAAACCAATTATGTCAAAGGTGTGAACAACTGGGCATTTTTCTTAATAAGAACACAGTTATGAGTCCCCAGTTTGAA TCAAGCCAGGTTCTTAACAATGTCACACTTTTGGAATCTAAGCTCAAGAGAATCCAGAGGACTGCCTCAAACAATCTCCA GCTTCTTATTTGTGTAATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAACGGATTGCTGAGACAAGTATCGGTCTCA TAAGCCAATGCTGCCTGTACCCAAATCTGTGCAAGTTAAGTTCACAGTTCTTGGCAAATTTGGCCCTCAAAATCAATGCC AAAGTTGGTGGATGCACAGTTGCCCTCTACAACTCACTGCCTTCTCAATTACCACGCCTCTTTCACATCGATGAGCCCGT GATATTCATGGGAGCCGATGTGACTCATCCTCATCCTCTTGATGATTCCAGTCCATCTGTTGCTGCTGTTGTTGGTAGCA TGAATTGGCCAACAGCAAACAAGTACATTTCAAGAATAAGGTCCCAAACACACAGACAAGAAATTATCCAGGATCTTGGT CCAATGGTGGGGGAATTGCTTGATGATTTTTATCAGGAGGTAGAGAAACTCCCCAACCGAATAGTTTTCTTTAGAGACGG AGTTAGCGAAACACAATTTCACAAAGTGATGCAAGAGGAACTGCAATCCATAAGACACGCATGTGAAAGGTTTCCTGATT ATAAACCTCTCATTACCTTTGCAGTTGTGCAGAAGAGGCATCACACAAGGTTGTTTCCCTTTCCCGGTGAAACTGATCCG TCTTCCCCTCAGAATAACTTTTTATACGAAAACATTCCTCCCGGGACCGTGGTCGATTCAGTGATTACTCATCCGAAGGA ATTTGATTTCTATCTCTGTAGTCATTGGGGTGTGAAAGGAACAAGCAGACCAACTCATTACCATGTCTTGTGGGATGAAA ACCAGTTTACTTCTGATGAGCTTCAGAAGCTGGTTTACAATTTGTGCTACACTTTTGTTAGGTGTACAAAGCCAATTTCT TTGGTGCCTCCTGCATATTATGCACATTTAGCTGCATACAGAGGAAGACTTTACCTTGAGCGATCAGAGTCCTTAGGTTT GTTCAGAAACACATCTACATTATCAAGAGCTGCTCCTCCAAAGACAGCACCACTTCCTAAACTTAGTGAAAACATCAAGA AGCTCATGTTCTACTGCTAG
CDS sequence (LotjaGi2g1v0300100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCTCGGGTGCTCTGCCGGCATATGATGGGAGACAGAATCTTTACAGTTCAATTGAATTCCAAAACGATAAGCTTGA GTTCTACATTAGCCTCCTAATCCCAACAAGCAAACTGACTTCACCTTATGGAGAAATGTATGACTTGAAGGAGAAGAAAG AACAGCATAAACTGTTCCGGATAAATATCAAACTAGTCTCAAAGATTGATGGGAAGGAGTTAACTAACTACTTGAGCAAA GAGGGTGATGAATGGATTCCACTTCCACAGGATTATCTACATGCTTTGGATGTAGTTCTGAGGGAAAGCCCGACTGAGAA ATGCATACCTGTAGGGAGATCATTCTACTCAAATTCAATGGGAAGAAGCAAAGACATTGGGGGAGGAGCTGTGGGATTGA GGGGATTCTTTCAGAGTCTTCGACCGACCCAACAAGGACTTGCTCTCAATCTCGATTTCTCAGTAACTGCATTCCATGAG AGTATAGGAGTGATTTCATACTTGCAGAAACGCCTCGAGTTTCTTCGAGACCTTTCTCAAAGGAAGACAACTCAATTAAC TTGTGAAGAAAGGAAGGAAGTGGAGAAGGCACTGAAGAACATCAGGGTCTTTGTTTGCCACAGAGAAACAGTTCAGAGAT ACCGTGTCTACGGCTTAACTGAGGAGGCTACTGAAAATCTTTGGTTTGCTGACAGGGATGGACAGAATCTGAGGCTTGTG AATTACTTCAAAGATCACTATAACTACGACATACAATTCCGAAAATTGCCATGCTTGCAGATTAGTAGGAGTAAACCTTG TTATCTTCCTATGGAGCTTTGTGTGATCTGCGAAGGCCAGAAATTCCTCGGGAAACTGTCGGATGATCAGACAGCAAGAA TACTCAAGATGGGCTGCCAAAGACCAGGAGAACGAAAAACCATCATCGAAGGAGTCATGAGAGGAAATGTTGGGTCTACC AGTGGTGAGCAGGAAAGAGAATTCAAACTCCAAGTCTCAAGAGAAATGACAAAGTTGACTGGGAGAATTCTTCACCCTCC CAAACTAAAGCTTGGAGATGGAGGTCATGTGAGAAACCTTACTCCTTCACGCCATGACCGTCAGTGGAACCTTCTAGATG GCAATGTCTTTGAAGGAACTACAATTGAAAGGTGGGCACTTGTAAGCTTTGGGGGCACCCCTGAGCAGAAGTCTAATATC CCTAGATTCATAAACCAATTATGTCAAAGGTGTGAACAACTGGGCATTTTTCTTAATAAGAACACAGTTATGAGTCCCCA GTTTGAATCAAGCCAGGTTCTTAACAATGTCACACTTTTGGAATCTAAGCTCAAGAGAATCCAGAGGACTGCCTCAAACA ATCTCCAGCTTCTTATTTGTGTAATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAACGGATTGCTGAGACAAGTATC GGTCTCATAAGCCAATGCTGCCTGTACCCAAATCTGTGCAAGTTAAGTTCACAGTTCTTGGCAAATTTGGCCCTCAAAAT CAATGCCAAAGTTGGTGGATGCACAGTTGCCCTCTACAACTCACTGCCTTCTCAATTACCACGCCTCTTTCACATCGATG AGCCCGTGATATTCATGGGAGCCGATGTGACTCATCCTCATCCTCTTGATGATTCCAGTCCATCTGTTGCTGCTGTTGTT GGTAGCATGAATTGGCCAACAGCAAACAAGTACATTTCAAGAATAAGGTCCCAAACACACAGACAAGAAATTATCCAGGA TCTTGGTCCAATGGTGGGGGAATTGCTTGATGATTTTTATCAGGAGGTAGAGAAACTCCCCAACCGAATAGTTTTCTTTA GAGACGGAGTTAGCGAAACACAATTTCACAAAGTGATGCAAGAGGAACTGCAATCCATAAGACACGCATGTGAAAGGTTT CCTGATTATAAACCTCTCATTACCTTTGCAGTTGTGCAGAAGAGGCATCACACAAGGTTGTTTCCCTTTCCCGGTGAAAC TGATCCGTCTTCCCCTCAGAATAACTTTTTATACGAAAACATTCCTCCCGGGACCGTGGTCGATTCAGTGATTACTCATC CGAAGGAATTTGATTTCTATCTCTGTAGTCATTGGGGTGTGAAAGGAACAAGCAGACCAACTCATTACCATGTCTTGTGG GATGAAAACCAGTTTACTTCTGATGAGCTTCAGAAGCTGGTTTACAATTTGTGCTACACTTTTGTTAGGTGTACAAAGCC AATTTCTTTGGTGCCTCCTGCATATTATGCACATTTAGCTGCATACAGAGGAAGACTTTACCTTGAGCGATCAGAGTCCT TAGGTTTGTTCAGAAACACATCTACATTATCAAGAGCTGCTCCTCCAAAGACAGCACCACTTCCTAAACTTAGTGAAAAC ATCAAGAAGCTCATGTTCTACTGCTAG
Protein sequence (LotjaGi2g1v0300100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSGALPAYDGRQNLYSSIEFQNDKLEFYISLLIPTSKLTSPYGEMYDLKEKKEQHKLFRINIKLVSKIDGKELTNYLSK EGDEWIPLPQDYLHALDVVLRESPTEKCIPVGRSFYSNSMGRSKDIGGGAVGLRGFFQSLRPTQQGLALNLDFSVTAFHE SIGVISYLQKRLEFLRDLSQRKTTQLTCEERKEVEKALKNIRVFVCHRETVQRYRVYGLTEEATENLWFADRDGQNLRLV NYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTARILKMGCQRPGERKTIIEGVMRGNVGST SGEQEREFKLQVSREMTKLTGRILHPPKLKLGDGGHVRNLTPSRHDRQWNLLDGNVFEGTTIERWALVSFGGTPEQKSNI PRFINQLCQRCEQLGIFLNKNTVMSPQFESSQVLNNVTLLESKLKRIQRTASNNLQLLICVMERKHKGYADLKRIAETSI GLISQCCLYPNLCKLSSQFLANLALKINAKVGGCTVALYNSLPSQLPRLFHIDEPVIFMGADVTHPHPLDDSSPSVAAVV GSMNWPTANKYISRIRSQTHRQEIIQDLGPMVGELLDDFYQEVEKLPNRIVFFRDGVSETQFHKVMQEELQSIRHACERF PDYKPLITFAVVQKRHHTRLFPFPGETDPSSPQNNFLYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLW DENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRNTSTLSRAAPPKTAPLPKLSEN IKKLMFYC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 772 | 770 | 4.4E-296 | – | |
| PANTHER | 3 | 772 | 770 | 4.4E-296 | – | |
| Pfam | 3 | 100 | 98 | 2.0E-11 | ||
| SMART | 109 | 161 | 53 | 3.4E-22 | ||
| Pfam | 110 | 159 | 50 | 3.3E-17 | ||
| Gene3D | 155 | 282 | 128 | 1.2E-26 | – | |
| SUPERFAMILY | 156 | 314 | 159 | 9.89E-40 | ||
| SMART | 169 | 300 | 132 | 1.3E-4 | ||
| ProSiteProfiles | 169 | 278 | 110 | 21.849 | ||
| Pfam | 172 | 294 | 123 | 1.1E-22 | ||
| CDD | 172 | 277 | 106 | 6.37614E-28 | – | |
| CDD | 326 | 768 | 443 | 0.0 | – | |
| Gene3D | 343 | 520 | 178 | 1.7E-37 | – | |
| SUPERFAMILY | 442 | 769 | 328 | 3.29E-82 | ||
| SMART | 457 | 769 | 313 | 9.5E-109 | ||
| ProSiteProfiles | 457 | 769 | 313 | 41.691 | ||
| Pfam | 458 | 766 | 309 | 2.1E-93 | ||
| Gene3D | 528 | 808 | 281 | 3.4E-107 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0300100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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