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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0300200 |
| Transcript ID | LotjaGi2g1v0300200.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ERD (Early-responsive to dehydration stress) family protein; TAIR: AT1G69450.1 Early-responsive to dehydration stress protein (ERD4); Swiss-Prot: sp|F4I248|CSCLB_ARATH CSC1-like protein At1g69450; TrEMBL-Plants: tr|K7K7Q0|K7K7Q0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0300200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77460286..77467868) extracted from Lotus japonicus Gifu genome v1.2.
ATGTGTTCACTATATCAAATGTAAACAGTGGCTCTAACTGGTAAATACTACCTCTATATTTGATTGTTCTAGTTGAGCTA TGCCTAGAGAACCCATGGGGGAGTTTCTATTCAGCATTTATCTTTTTTAGCTTCTGGCATGAGATTATTATCCTCTATGA TATTTGTTTCAGGTTATGGGTCCACTTCAGTGCCGTATATATTGTCACTGGTTTCATATGTGTACTTCTTTTTTATGTAA GTATATTTTGTCTAACTGGTTCAGCAATGAGCAATCCCCATAGTTTTATGCCTTTTACATTGAACTTAATTATGGTGTTT TAAGATGAATATGGAATATAAATAATTAAATATCTATTATAGCTTCGGCCGGTATAGTTAGACTAATTAGAAGGATAAAA ATTACCTCTAAATTCTACAGAGGTTGATAACAAGGGGTTTCCTTTCTTTTTAGTAATTTTCTCTTTATCTTTACTAATTG AGCTATAGCTTATGCAAGAGCCAACATACTTACTCATTTCTCAATATGATTTTAATCTTCAGGAGTATAAACACATATCT TCTAGAAGAATTTCTTATTTTTATTCATCGGAACCGCAACCTCATCAGTTCACCATTTTAGTTCACAGCATTCCAACTTC CAACTCTTGCAGCATCAGTGACAGTATTGATAGCTTCTTTAAAGAGCTTTACCCTTCTACATATCTATCACATGTGGTTA TTCGCCGTACAAGCAAAATCGGAAGTCTCCTAGTAAGAATTGTATTGAAGTTTAGAGTTCTTTCTTGTTAATTTATTTTC TCATCTATATTTTATATTTCCTTGGAAACTTGTAGCCTTCTAAAAGGCTGTATAATTCTGTAGGTTTGTGCATTGTTCTC CATATTTTTGCTTTTAATTTCAAAATTTAAGCACCAAGATATGTCATTTAGAGTTTAAGGACATAGATACCCATACATAA GTACCCATTGAGTATGAGTGTAAACACTGAAGTTGATACTGATGTAATTTTCGATTAGCGAGTCTTTATCTTAAATCCAA GTACGAATGTCGACACTTTAATACCCTTGTCATGTATGTCATTTTCATTTTCCAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGTTATTTGTGCTCAGAAGCTGTATCTGAGTTCCAGAGGGAGCCAGCCTTGAGCTGAGTTTCATGGCCAGGCTTAGA GTATGTGGGAGGTTGAGAGTTGTTGTATCACAGAGACTCAGAGTATAGGTGAGGCCAGATATAGAGAGAGTGATGTAATC TGTTTGTCAGATAAATGAAAACACAACTTCTCCGTGGATGTAGGCATTTAGGCCGAACCACGTTAAATCTTGGTCTCTGT ATTTTTCCTCTTCTCATTCCTATCCTAATACTTAAACAGAAGATGGATTTATTACCCAGAAAGTCTTCTGAAATGTTCCA TTACACGTAACCTGACTAACACAAACCAAGCCTGATACCACATGACCAGAAAATTCAGAATTCATAAAGTACTTCTAGGA TTGGAAGTATGAAACTGTGCAGTTAAATGACAACTTTCTAATGTTAGTAGGTAGTAATTTTAAATAATTTTAATCTTTTT GGACCTATTAAGTTTTATTACAATTAGCCCAATAATCATAAATACACCAATATTCAAGTCTTTTGGCCTTTAAAAACATT GGCTCACTAGATGCTAGTATGTCCTGCATTAGCCGTCCTCTTGCCTTTGTATACATCAGATTATACAAAGTTGATTGAAG TTGGGCTCTTAAAGAATTTTCCCTGCATGAAGTTTAACAAGCCTGTTAATACATATTACTTCTCACTGACAGCCCGGGGA ACATTTTCAATTTTTCTTATTTGATTAAAATCTTCAAAGCGCTTGCTTTTGTGCTACATGAATTCCTATACTAAAATTCC ATAATTTTGCAATTGCAAAAAGTTTGTGATATTGCCCAAATTGAAGTTTGCTGTTGATATAACATAAAGGGTTAAGTCAG CACCAACTAAGAGAGTGAGGATGGTCATATTTCTCTGTGCCTTCTTGATCTATATGCATTCTTGATCATAGTTCCTTTGA CTGTACATAATTGGCACTGACTAATTAGCAGGAGCTAATGATCTGAACTGTGTGTAAAACAATCTACCTATTTGCTTTCC ATACTGGAGTGATTAAAACATATTTGGCCAGATGTTACTATTTTTTTGTTTTGTTTTACCTTCTCAAATACTTTTAATAT TTAAGCATCACAATGTTGTGAGAGGTTCCCTTTTGAAGATGATTTAAAATGTAAATGAGATATTCCATTGAGAAAATATT GTTCCTAAAGGAAAATTCCATGAGACAATCTTAAATAATCAGTATTAATTTTAACATACACTCTAGTAATCCAACTATCA TTTCAATAATATGTATAAAGTGGCAGGCTGCTATGTTCTTGATCATTTAAGTGTTTTGATAGACTGCTTCTTTTTCACTT TTTAAGAGTTTGCAACTTATTTCCCTATCTTTCCATTTGTTTAATCTAGAATGAAGCAAAGAATTTGTATAAAAAGGTTA CTCAATTACGATCAGACCCCATTCAGCAAAAACATAAGCATGGTGGTTTTCTTGGACTATTTGGCAAAAAAATAAATAAA CATATAGAGCATTATGAAAAGAAGTTAGAGGACATTGAGGTGAATGTAAAATTGCAGCAGTCAGAGGCTTCATTGGCAGG TGAAGTATGTGGTAATCTTTGTAGTCTTTTCCTGAAAAAATAAGCATTTTAAAAGTAGTTTTAATCTTGTTGAACTATTT TTATTTTTCTTGTCTCTGTTGGTATAAAGTGCATGCTAATAATCTCCATTCTTTTTCAATATTCAAGGAGGCTCGAGCTG CCTTCGTATTCTTCAAGGCTCGGTATGCTGCTGCTACAGCTTTACATTTGCAGCAATCAGTCGATCCTACCCAGTGGGTT ACTGAGTTAGCTCCAGAACCTCATGATGTTTACTGGCCTTTCTTCTCTAAATCATTCATGAGAAGATGGATTTCGAAGTT GGTGGTTGTAGTTTTGTGCATTGTTTTCACTATTATGTTCCTTTTACCTGTCGTATTGGTTCAGGGGCTTACCAACTTAA GTCAATTGGAAACTTTGTTTCCATTCTTGACAAGTATCCTAACCATGTAAGTTAACTTGGTTTATTTATTTATTTATATG TTAATGCCTAACCCCTCTCTCTATTTTATGGTATCTTGCATCTCTTGTGCTCCTCATGGCCTCATTATCCTAGCTAGGAG TTATTTTCAAAAGAAAAACTTTCAGAGTTGCATGGGAATTAGGTCAAAATGATTATTTTGCGTTTCTGAAATATATGCTT TCAATCATTGAATAGGCCTCCACTTGGTGTGCTGGTTTTTATGTTGCCTTGATCATTTGTACAGTCAATTATGAAATATC CATTAGTTCAGAGGAGGATAAACCCAGGAAGCTGTAAATATAGTTTAAGGGTGTGTCTGATGCACATCGAGGAACATCAC AGGTAGAACTACAAAGTGCAAGTAGTTGAGTTACAGCATGATTTTTTAGGGTTGTCTTGTATATGGTGATCGGTGTGCAA AAAAAAAATAGTTGAGAGAGAAAAGGGGAAGAAAAGATAGAGGAGGAGGGTTGAGCGAGGGAAGGGAACTCAGGGAAGAG GGCTGTTGATGAGAAAAGGAAAGAGTTGGATATTTGTCTTTTGATGTTGTTGTGTGGGGAATAAAAGATTGTGTTATGGT TTGTTGAGTAACAAGTTTAAAACTTTGTCTTATACTTCATCTTTTTTTTTTGTAATGTCCAATGACCATTTTTTAAATCA AACACGGAACAAGTATTTTCGTGCTGTCCTTTCCTTCATTTTTTAGAATACAAAAACACTCTAAAGCATAAACCAAATTA AGAAAACAAACTCGGTGGTCAGGTTTCAGAATTGTGGTGCCATTTATTGGTTGTAAGAAAAAAGTTTCATGGATGTCTAT ACTTACTGCAATCAGATTTCTTGTGTGCTGCATACCCATAGCATTTTTGTTATACCTGCTTAAGTATGGTTTTGCAATCG ATAAAGGAATGGTTACTAGAAGATCATTGTAGTTGTTATAGAAGCCAGATTTACTCAATGTTCCAATTTCTTTCTGCTAC AATGTTTCAGTGTTTCCAATTTGTTTCTCATAAAATATCTGCATGTAATTTTATCTTTCCAGTATAGTCAAATTCATTCT AACTATCCAATTCGGTTACTTATGATGCTATATCTCTTCTCCTCCCTGTTCAATGTACCGGGTCGAAATCCCTATTACTT CATATCAATATATTTGGTCTTTACAAAAAAGAAGAAGCTTTATCTCCTTAATTAGGTTGACATGCTAGCTTTAGCTTTAT GTTTTATTTTTCAATTGTTAATGCAAAATCTCTAAGCCTTTTGTGAATCTGCTTGCAGAAAATTTGTCAGTCAAATAATT ACAGGATACCTTCCCAGCCTTATTCTTCAGCTGTTTCTGAAACTGGTTCCACCTGCCATGGAGTTCCTTTCCTCTATTCA AGGATATATCTCACGCAGTGCTATAGAAAAGAGCGCATGTACTAAAGTGTTGTGGTTCACTATATGGAATGTTTTTTTCG CGACTGTATTTTCCGGGTCATTTTTATCTATGATATTTATCATCCTCGATCCCAAAGGCATTCCTGAGAAACTGGCAATT GCAGTTCCTGCACAGGTTAGACAATGTTTCTCTCCATTGTAACCTTTCTGATAGCATATTTTTTAAGGATACAAAAATAC TGCTGATGGTAAGAACTTTTCCCCCCCTAGTCAAATTTCTCTTAATGAGGCCTACAAAAATAATGGGTAAGGCTTGAACC ATGTTGGTGGAACTGAATCATGCTTCATGTTCCATAAGTTAATCTGATCTCTACATTTCTTCTTGTTGAGATTCCATATT GACTAGAGATATGGCCAAAGTAGTTTCTGCTAAGGTTGGCCAATCCCCATACTTAAGCTAGTTTTTAAGGGTAGAGTTAG ACCTAGACCCCAGTTTTTAAGATGGTATCAGGAACCCCGAAACGCATGTGGTTCGACTCCGAAATAGGTCATACGTGATC GTCTCAGGAAACCTGTGATTTTGACATTCTGTCCACTTCTTTAAGATCTGGCCAAACGCATGTGGTTCGACTCCGAAATA CCTCATACGGGATCGTGTCAGGAGACCTGTGATTTCAACATTCTGTCAACTTCTTTAAGATCTGGCCACTGAAAAAATTG TTGACCCTCCAACACACACACATAACCCTAATAATAACTCATAGCAACTCAAATTATCTACAAAAATACAAGTCTAATAA TAGGAATTTATGGCAAATTATGAGTATAATATGCCAAAGAAAAAACCTCTACAGAAGAAACATACCCCAGCTAAATGTCC TCCCAAAATTTTATACAAGCACACATCATCATTTATTCAATCACTTTAAACTTATTATCAAGTAAAAAATCTGCATGCCA ATTCTTAATAAAACAATTTTTTATTTCTGCTGGAAAGCATCTCGGATTTAGGGAAAATGTCATCTATTTAGGATGTGTTA TGTGTATATATTCTGATATAATTCTGACTTGATTTGTATAGTTTCCATATTTCCTTGTTTCCTAATATATGCGCTCTCCT ATTATCCGTGATTGTAATATTTGTTTAAATAATGGATCTTTGCTGAGGTTAATCCTCAATCAATTCAGTAAATCATATGT CAATCTCAAGAATTTCTATCTTTTTGATGCAGTTAACTTTGGTTTGATTGTAGGCATCATTTTTTATTACTTATGTTGTC ACGTCAGGATGGACAAGTACATCATCAGAACTCTTCCGTATAATGCCTTTCATTCTCAGTTTGATAACACGACTTTTCAC AAGTCCAGACGATGAATTTGAAGTTCCATCCATTCCATACTACAATGATATTCCAAGGATCCTTTTCTTTGGACTTCTAG GCCTTACATATTTCTTCCTAGCACCACTAATTTTACCGTTCTTGTTGGCCTACTTTTGTCTTGCATACATCATTTATCGA AACCAGGTAAGCATTTATCTGGATCCTATTTTGAAATATATTCTAGGAGTGTTTAATTTTCTGAGCTTATATTATGTCAT GCTTGCGTTTCTACCCTGCTTCTACCTATAAAATTGAGGGAGAACTATGACATTGGAACTCCTGACAAAATATTTCCTAT GTAGGAAGTGTTCAAGATACAGAACCATTTCTGGGCCTCTATCTATTGGGCTAAATTAATATGGTACCAAAGCTTCTATG ACTAAATGATAAGAAGTTATATCCTTGTTACCCCTATTCCTTATAATTAAATTAAAGTACCAAGTAAAGTGGGAATGATT TCCATGCTTCAATTCAAAAGGGCTCTCAGTGAGTGGACATGTGGTGATATAATTGTTCCTGTGTCCCCACCTAACAACTA ATTTCCCAATGTTGGCTAATTTTTTTCATTAATTGAAAATGTGTTCAACAGGAATTCCTAAATTTGGGAAGATCTGCATG ATGTAGCTTAAGAAGAATATTTGTAATCAAATAATAGAACTAAATAGATGCCTTAATTTTTTTGGGGTGTCATAGTGTGG ATATATGGTTTCCAAAAGTTACTATGTAATTAAGCCTTTTATGTTATGGAGAAAGTTTTGCAAAGTGATCATGGCTAGAT TACTATGTTAAGGAAAAGTTACATTGTTAATCTATCCAAATAGAACTAAATAGATGCAATTTGGGAAGATCTGCATGATG TAGCTTAAGAAAAATATTTTTAATGCTCTCTTGAAATTTTAAAACTGACAGATAGATAGGAACAATAACAATCTCAAAAT AGTGATAGAGCGGATGGAGTAATATTGATTGCTGATTTCGTACAAGGATTACTTTCTTTTGGTTGACTCTAGAATTAAAG TAATTTTATCTATGAAAATGTGAGACCCTTAAAAAACATCTTTTTAATTGACTTGCACTGATGCCTCTCCTTTGTATTAT GCAGTTTATGAATGTATATGCACCAAAGTATGAAACTGCTGGGAAATTTTGGCCCGTTGTGCACAATTCAATGATATTTT CTCTAGTACTCATGCACATCATTGCAGTGGGAATATTCGCATTGAAAAAACTCTCCCTAGCATCTACCTTGACGCTTCCT CTACCAGTTGTCACGCTTTTATTTAACGAGTACTGCAGAAAACGGTTCCTACCCATATTTGTTGCATACTCTGCAGAGGT ATATTTCAAATCCAGAAAGTGACCAAAACCTGAGTGTTCAAATGTTCAATTGAGAAGGCAACAATTCTCTCTGAAAGAAT AGAATAGAGTTGTTGCATGTTTAATTCAATTCATGAGCTCTGATTTTTATTTGGTTTTTTGTTTCAGACTTTGATAAGGA AAGATAGGGAAGACCAGAATGATGCTGCAATGACTGAGTTTTATGACAATTTGGTTAATGCTTATGAAGACCCTGCTTTG CTTCCAATTCAATCTTCATCAAACACTGACAATCTTTCCAGTCCTCTTATATCTGAAGCTTAA
CDS sequence (LotjaGi2g1v0300200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTTCACTATATCAAATGTTATGGGTCCACTTCAGTGCCGTATATATTGTCACTGGTTTCATATGTGTACTTCTTTT TTATGAGTATAAACACATATCTTCTAGAAGAATTTCTTATTTTTATTCATCGGAACCGCAACCTCATCAGTTCACCATTT TAGTTCACAGCATTCCAACTTCCAACTCTTGCAGCATCAGTGACAGTATTGATAGCTTCTTTAAAGAGCTTTACCCTTCT ACATATCTATCACATGTGGTTATTCGCCGTACAAGCAAAATCGGAAGTCTCCTAAATGAAGCAAAGAATTTGTATAAAAA GGTTACTCAATTACGATCAGACCCCATTCAGCAAAAACATAAGCATGGTGGTTTTCTTGGACTATTTGGCAAAAAAATAA ATAAACATATAGAGCATTATGAAAAGAAGTTAGAGGACATTGAGGTGAATGTAAAATTGCAGCAGTCAGAGGCTTCATTG GCAGGTGAAGAGGCTCGAGCTGCCTTCGTATTCTTCAAGGCTCGGTATGCTGCTGCTACAGCTTTACATTTGCAGCAATC AGTCGATCCTACCCAGTGGGTTACTGAGTTAGCTCCAGAACCTCATGATGTTTACTGGCCTTTCTTCTCTAAATCATTCA TGAGAAGATGGATTTCGAAGTTGGTGGTTGTAGTTTTGTGCATTGTTTTCACTATTATGTTCCTTTTACCTGTCGTATTG GTTCAGGGGCTTACCAACTTAAGTCAATTGGAAACTTTGTTTCCATTCTTGACAAGTATCCTAACCATAAAATTTGTCAG TCAAATAATTACAGGATACCTTCCCAGCCTTATTCTTCAGCTGTTTCTGAAACTGGTTCCACCTGCCATGGAGTTCCTTT CCTCTATTCAAGGATATATCTCACGCAGTGCTATAGAAAAGAGCGCATGTACTAAAGTGTTGTGGTTCACTATATGGAAT GTTTTTTTCGCGACTGTATTTTCCGGGTCATTTTTATCTATGATATTTATCATCCTCGATCCCAAAGGCATTCCTGAGAA ACTGGCAATTGCAGTTCCTGCACAGGCATCATTTTTTATTACTTATGTTGTCACGTCAGGATGGACAAGTACATCATCAG AACTCTTCCGTATAATGCCTTTCATTCTCAGTTTGATAACACGACTTTTCACAAGTCCAGACGATGAATTTGAAGTTCCA TCCATTCCATACTACAATGATATTCCAAGGATCCTTTTCTTTGGACTTCTAGGCCTTACATATTTCTTCCTAGCACCACT AATTTTACCGTTCTTGTTGGCCTACTTTTGTCTTGCATACATCATTTATCGAAACCAGTTTATGAATGTATATGCACCAA AGTATGAAACTGCTGGGAAATTTTGGCCCGTTGTGCACAATTCAATGATATTTTCTCTAGTACTCATGCACATCATTGCA GTGGGAATATTCGCATTGAAAAAACTCTCCCTAGCATCTACCTTGACGCTTCCTCTACCAGTTGTCACGCTTTTATTTAA CGAGTACTGCAGAAAACGGTTCCTACCCATATTTGTTGCATACTCTGCAGAGACTTTGATAAGGAAAGATAGGGAAGACC AGAATGATGCTGCAATGACTGAGTTTTATGACAATTTGGTTAATGCTTATGAAGACCCTGCTTTGCTTCCAATTCAATCT TCATCAAACACTGACAATCTTTCCAGTCCTCTTATATCTGAAGCTTAA
Protein sequence (LotjaGi2g1v0300200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCSLYQMLWVHFSAVYIVTGFICVLLFYEYKHISSRRISYFYSSEPQPHQFTILVHSIPTSNSCSISDSIDSFFKELYPS TYLSHVVIRRTSKIGSLLNEAKNLYKKVTQLRSDPIQQKHKHGGFLGLFGKKINKHIEHYEKKLEDIEVNVKLQQSEASL AGEEARAAFVFFKARYAAATALHLQQSVDPTQWVTELAPEPHDVYWPFFSKSFMRRWISKLVVVVLCIVFTIMFLLPVVL VQGLTNLSQLETLFPFLTSILTIKFVSQIITGYLPSLILQLFLKLVPPAMEFLSSIQGYISRSAIEKSACTKVLWFTIWN VFFATVFSGSFLSMIFIILDPKGIPEKLAIAVPAQASFFITYVVTSGWTSTSSELFRIMPFILSLITRLFTSPDDEFEVP SIPYYNDIPRILFFGLLGLTYFFLAPLILPFLLAYFCLAYIIYRNQFMNVYAPKYETAGKFWPVVHNSMIFSLVLMHIIA VGIFALKKLSLASTLTLPLPVVTLLFNEYCRKRFLPIFVAYSAETLIRKDREDQNDAAMTEFYDNLVNAYEDPALLPIQS SSNTDNLSSPLISEA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| PANTHER | 6 | 574 | 569 | 0.0 | – | |
| PANTHER | 6 | 574 | 569 | 0.0 | – | |
| Phobius | 6 | 28 | 23 | - | – | |
| Phobius | 29 | 220 | 192 | - | – | |
| Pfam | 50 | 207 | 158 | 4.2E-31 | ||
| Coils | 137 | 157 | 21 | - | – | |
| Pfam | 220 | 484 | 265 | 9.2E-72 | ||
| TMHMM | 221 | 243 | 23 | - | – | |
| Phobius | 221 | 241 | 21 | - | – | |
| Phobius | 242 | 252 | 11 | - | – | |
| TMHMM | 253 | 275 | 23 | - | – | |
| Phobius | 253 | 274 | 22 | - | – | |
| Phobius | 275 | 312 | 38 | - | – | |
| Phobius | 313 | 338 | 26 | - | – | |
| TMHMM | 316 | 338 | 23 | - | – | |
| Phobius | 339 | 349 | 11 | - | – | |
| TMHMM | 348 | 370 | 23 | - | – | |
| Phobius | 350 | 368 | 19 | - | – | |
| Phobius | 369 | 374 | 6 | - | – | |
| TMHMM | 375 | 392 | 18 | - | – | |
| Phobius | 375 | 391 | 17 | - | – | |
| Phobius | 392 | 410 | 19 | - | – | |
| Phobius | 411 | 443 | 33 | - | – | |
| TMHMM | 412 | 443 | 32 | - | – | |
| Phobius | 444 | 463 | 20 | - | – | |
| TMHMM | 464 | 486 | 23 | - | – | |
| Phobius | 464 | 485 | 22 | - | – | |
| Phobius | 486 | 490 | 5 | - | – | |
| Phobius | 491 | 510 | 20 | - | – | |
| Phobius | 511 | 575 | 65 | - | – | |
| Coils | 573 | 575 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi2g1v0300200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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