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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0305600 |
| Transcript ID | LotjaGi2g1v0305600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ran guanine nucleotide release factor-like protein; TAIR: AT1G69680.1 ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein); Swiss-Prot: sp|Q54ML6|MOG1_DICDI Probable ran guanine nucleotide release factor; TrEMBL-Plants: tr|G7KCJ8|G7KCJ8_MEDTR Ran guanine nucleotide release factor-like protein; Found in the gene: LotjaGi2g1v0305600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77884115..77889263) extracted from Lotus japonicus Gifu genome v1.2.
GCAGTACGTTGAAGCTACAGAAGAAACCAAACCAGAGCCTTCTTCTTCTTCCATTCTCACTCTCGCTCACTTCGATTTCT CTCAGTCTCAGTCTCAGTCTCAGGTATTCATATTTCTTCTGTATTCCCCACTACATTTTCAACAGGGGTTTCAAATTCGC AAACTTTTGAATTAACTCTAGCTTAACCCCAAACTGTGTTTAACTTGTCTTTCTTCTTGTTCGTCAGTTGATTATCGTTC AAGAAACCAAAAAAATCTTCAAAAAGCATCCATTTTTGGGGTTTTTATTGTAAGTTCATGTGAATTGCTAACATGGGTAG GTGCTGATTTTGTGTTTTCATGTGAACCAAAAAGAAAAACACGCTCCTTCTCTTCTCTCACCACGAAAAACACGCTTTGT TCTCTCCCTCTGTTCTGTACACGCTCTGCTCTCTCCCTTTGTTCTCTCACTCTCAGTCTCACGCCTCCGCCTGTCCGCCA GCCGCCTCCGGCCTCCCCCAGTCGCCAGTCCCCCTGCTCCTTGCTCCTGCAGTCCTGCCTCTGCCTCAATCAAAACTCAA AAGGTAATGCTCACTTGAAGCTCTCACTCTCAGTCACTCAAAGGGTTTGGGATTGGGACTTTGGATTCTTGTTCTAGGGT TTGAGAAAATTGAAATTGATATGGGTTTTCTGAATTCTTGTTTTAGGGTTTGAGGAAATTGAAATTGATATGCGGAATTT GGAAACTGAAATTGATATGTGGAAAAGGGTTTTTTGAATTCTTGTTCTAGGGTTTAAGAAAATTGAAATTGACATGTGGA AACTGAAATTGATATGTGGAAAAGGGTTTTCAGAATTCTTGTTGGACATCTAATGATAGTTGTCAAGGTAATTGACACTG TCCAATTCAGATCATGGCTTTGGTTACGAGACAAATCAAAGGAATTCTGTTGCTCTTTTTATGATTGACAAATACAACCT GTTTTTGCAATTAATTCACTTTGATTTTGATTTGAGGCCGTGGGACCTTGCTGATATGGTAGAGGATAGTCCATTTTCTC CGATGGTGCTGAATGGAAATTATATAAGTGGCTTAGAGGATGAGATATCATTTTGTTGTAGCTGGCTGGAGTATTTAATT TTTGTCCAGGACCCAAACTGTTGCTGTTATGTGGCTGTTTGGTGCTATTTAAATCTGTCTGCAACATTGTTATTGCAGCA GTTTGCTCTTTGCTCTGTTTTGTTCTTTTTTACCATGTATTTTTTGGTTTGAAGTACACCTAGTACTTCCTTTAATATAG TTCTTTGCTTATCAAAAAAATCTAATGATAGTTCATTGCTTTTATGTTTAGCCTCACTGATATTTAAAGTCTGGATTCGC CCCTGGTGGTGGTGCTGGAACTGTCCCCAACTCCCCATTTCTTTGTATCGTTGCAGAAATGCCAGGAGATGTTGTTCACC TCCGTCCTTTGTTTGGGGGGGAAATATCAAGCACGTTCCCCAACAGGTTCCAGGTGATTGTTCTCTTTTTTTTTTTGCAT TTTCCCAATTTATTGATGCTTTTGATGTTTTTGTACTGGTACTGTAACTTCAGTTTTGCTGAAATTGAGATTCTGGTGTT TCTTGTAGGATGTGAGCAACATTCGCGATGTCCCGGATCATCAGGTTTGTCCTGCTTTCTATTTGATTATATTGTAGGTT CTGTTTGATCCTTTTGCTAACTTAATTTTTGGGACTTGATGCTTTATGCAGGAGGTGTTTGTGGACCCGAGTCGTGATGA AAGCTTGATCTTTGAGCTTTTAGATTTTAAACATGATGTTGCTGATAATGGAAGTGCTGCATGGTTTTTTCAAGACCTTG CTAGGGAGCAGGATGCTGAAGGAACTGTGGTATGCAATCATTTCATTTTAGTTTTTCAAGTTGCTGGATTAATGATGTGT GGAACTTAATTGGTATATAGAAACTGGATTATGTTTTCATTATCCTAGGCTGTAGCGATGAATAATTGTAGAATGTTGGG TGGTTCTAACTTCTAAGAGTAGGAATGTTAGGGGCTATGATATTGTCTATCAGTTCCTGATGTTGGTTATTATGATCTTT AACTTTGATGATTGGTACTTGGTAGACTCCATCTCCCCTGTCCTGGTACTATGGCTTGCATGTAGTATTTCTTCCATTTT GTCATGATCTAAGAATCCAAAAGAAGTTAAGTTGTTAAGTGAAGATGCATGAAAAGCTTGTATATTATCCTTAACACGTG CCTCATGCAAGAGCCCCTTGGGATTAAACTGAGTTCAACTTTATATTAAAAGAACGGGAGTGGCAAAGATTGAACTCTAG ACCATTTGATCATAGAAGCTTTGATACCATATCATAAACCAACTATCCTAGAGTAGATAGGTGAAGATAAAGGAATGATT TTTATCCATATCTGTAACACTTTTAATGCCTGAGTTATTTGATATAATTGAGCTATAAAAATACTTCAATTGCTCTACCG TATGTGCAATTGTGCTTGGGTGTATTATCTCATAGCACAGAAGAGCTGGGATTTCTATTGAAGAGGATAACTTTCTTTCA GCTCAGTTGATTTAACGCCTTATTTTCCACAGAACTTTATTGTGTCTCATGATCATCTCTCCACTTCAAATCATTTCAGG TTATTGAGCAGTCTGGAGTTCTTGAAGCACCTGGTTTGACACACAATAATATACCTACTGTTGTAACAACAGCAGTGGGC CAAATGGTAAAGTTTCTACTGTTTTGACTTTGATTTTGTTTACTAAATCATTCTGAGTCGTCCAGATGAGTCAACATAGG ATTACATTCACACATTGTTCTGATCCTTCTATGGGTTGCCAACTTAGATATTTGCAATCCATCTACATGACTTGTTGTTT TTACAGTCAGAATTCACAGATTGAGGCTGTGAAAATATGATGTTATAAGTGCAAATGTAATTGACTTAATTAATTTCATG CTTATTTGTTTCTCTTAATCATATTTAGTACATGATTACTTGAGTAGTTTTATTGTGACCTCTTTCTCTTCGCCATTATG GGTAAATTATATCAGTCATTTTAATTTTGGCATGTCAGCGGTGACCTATTCCCTCATACTGGTAATTTGATATCTACCCA GCCTTTGAAAATTTTGCAATAAGTAAGTGCATGTTTCCCTGCCCAATATTCGGAGAACGTGTGCGACGGCATATAGAGTC ATGGTGGGAGGGCTGGTTTACAGCTGAAACATAGTTTCTAGCCTGTCATACGACTTTCCTTAGATTTTCACATTTATGTT GATTGGCTTATTGTCTGCATCATATTTCTAGTAAAACTCGCAATATATGCTTGCAATTTTTTATTTTTTTAATATTCTGC TTGTACTGTCAAGAGTCAAGACGAACTTGATTGTCTCTTAGTGGGAACCTTAATTACCACGTTGTTGGTCTATCTCTATC TCTTTCAATATGAAATCATCGGATAACACATTGTATGTCACCAATGAAATATGTAAAATTTATTCTATAGCTCTTGAATG AGACAGGCCGTGTCTCTTCAGGGCTATAAAGATGCAAGTTAGTGTGTGTAAACTTGTTGATCGGAAGCTATTCTTTTTAT ATTTTATTTGTAGGGGAAGTTTGATGTCTTGTTCATATAGACCTTTTGTAAGATTGTTCTTTATATAGTGTCTGTTTTTT TTACCTTGTGTAAGTACTTTATGCCCTTGCTCTCAATTTTACTCCTCACTCTGTCATCTATAATTACTGCTAGGCAATTT CTAAGGGACGTCAAGGAAGGGAAGCACAAAATATTGTGAAGGTATGTTCTGTTTTGCTTGGCATGTTTTAAACTTATGCC ATGCTAATTTGACATTATTCCACCTTGACTGGTCTTCAGATCATTACAAAATTGGTTCATCTCTTCAGGTTTATTTGGCA AATTTGCGTCTTAAAGGTGTTGACACTGATGTGCTAATCACTGCATACGAGCCCATTGTTATAAAGTAAGTTTTTGGAAT CTCCTTTTCTTGACTATAAGCTCTTTGGAAAGTTTTCTTGCCTTTTATTGTTTCATCTGTTTCCTGATTGAGTGAGTTGA ATCAAATGTTTAAGTTTGATTTGGACACTTCTTTTTTCTTTTTTAAACTTCCTTCTCTTGTCTATATGATAAAACAATGG ATCGATGTTTGCTTTAAGCAGATTGAGGTCCACTAAAAATATGAAATACGATCTACATTTCTTTATTTCACTGACTTTAT GGTTGCCATGAGTTTGCAAGACATTTAATTTCTATTTTATGCCTGCAGCCCTTTGAGCGAAAGTGCAGACACAGTTGGTG CTGGCCTAGCCGTTCCTGCTGCTCAAGCTGGATGCATGTCCATGGATGAAGTCATTAAACTGGCTGTTACAAACTTCAAG GTTTATGACTGGGGTCTTTTTGGTCCCTGATCCTAGGTGTGCTAGGAGCATGTTGATGCGAAGCTATATGGACTCGGGAC TTTCCACATTGCTACTTGAGTGAAAATTTTGAAGAATAGGTTTCATCCCCATTTTGATCATTCCTGATGAGTTTTTTTTT TTTTTTTTTCTGTAGGCCAGTAGTACTTTGGTTTAGCATTTTCTCTTATTTAATCTAGTAGTTGTGATAGAGACCTAAAA TTAGAGTGGGCTTACTGTTAGTGGGCTTAGTGTTAGTGGGCTTATAGCCTATAAATAAGGGATTACTAGGAGAGTTTAAG CATCTTTTGGGATCATTAGGTAATTGGGACTTGGGAGAGAGTAGAGCCTCTCGAATGCTCTACAACTTTTGTAATCTTCC TTCTAATTCCTAATTGGGAATTAGGTTCACTATCAATATTATCCTTTTCAGTTCTTCTGATTTTCTGGGTCCTAACATTT GATAGAGACCTAAAATTAGAGTGGGCTTACTGTTAGTGGGCTTAGTGTTAGTGGGCTTATAGCCTATAAATAAGGGATTA CTAGGAGAGTTTAAGCATCTTTTGGGATCATTAGGTAATTGGGACTTGGGAGAGAGTAGAGCCTCTCGAATGCTCTACAA CTTTTGTAATCTTCCTTCTAATTCCTAATTGGGAATTAGGTTCACTATCAATATTATCCTTTTCAGTTCTTCTGATTTTC TGGGTCCTAACATTGGTATCAGAGCACCG
CDS sequence (LotjaGi2g1v0305600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAGGAGATGTTGTTCACCTCCGTCCTTTGTTTGGGGGGGAAATATCAAGCACGTTCCCCAACAGGTTCCAGGATGT GAGCAACATTCGCGATGTCCCGGATCATCAGGAGGTGTTTGTGGACCCGAGTCGTGATGAAAGCTTGATCTTTGAGCTTT TAGATTTTAAACATGATGTTGCTGATAATGGAAGTGCTGCATGGTTTTTTCAAGACCTTGCTAGGGAGCAGGATGCTGAA GGAACTGTGGTTATTGAGCAGTCTGGAGTTCTTGAAGCACCTGGTTTGACACACAATAATATACCTACTGTTGTAACAAC AGCAGTGGGCCAAATGGCAATTTCTAAGGGACGTCAAGGAAGGGAAGCACAAAATATTGTGAAGGTTTATTTGGCAAATT TGCGTCTTAAAGGTGTTGACACTGATGTGCTAATCACTGCATACGAGCCCATTGTTATAAACCCTTTGAGCGAAAGTGCA GACACAGTTGGTGCTGGCCTAGCCGTTCCTGCTGCTCAAGCTGGATGCATGTCCATGGATGAAGTCATTAAACTGGCTGT TACAAACTTCAAGGTTTATGACTGGGGTCTTTTTGGTCCCTGA
Protein sequence (LotjaGi2g1v0305600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPGDVVHLRPLFGGEISSTFPNRFQDVSNIRDVPDHQEVFVDPSRDESLIFELLDFKHDVADNGSAAWFFQDLAREQDAE GTVVIEQSGVLEAPGLTHNNIPTVVTTAVGQMAISKGRQGREAQNIVKVYLANLRLKGVDTDVLITAYEPIVINPLSESA DTVGAGLAVPAAQAGCMSMDEVIKLAVTNFKVYDWGLFGP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 6 | 199 | 194 | 7.8E-40 | ||
| PANTHER | 9 | 199 | 191 | 4.4E-65 | ||
| SUPERFAMILY | 9 | 199 | 191 | 3.09E-46 | ||
| Pfam | 10 | 150 | 141 | 1.4E-37 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0305600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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