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IPR016123 is a Mog1/PsbP, alpha/beta/alpha sandwich.
<p>This entry represents a structural domain consisting of a 3-layer α/β/α fold. The β layer is composed of seven β-sheets, and the overall order is: (β-hairpin)-β(3)-α-β(4)-α. Domains with this structure are found in the following protein families:</p> <ul> <li>Ran-binding protein Mog1, which interacts with Ran GTPase to stimulate guanine nucleotide release, suggesting Mog1 regulates the nuclear transport functions of Ran [[cite:PUB00015069], [cite:PUB00026393]].</li> <li>The photosystem II (PSII) oxygen-evolving complex protein PsbP, which is a regulator necessary for the biogenesis of optically active PSII. PsbP increases the affinity of the water oxidation site for chloride ions and provides the conditions required for high affinity binding of calcium ions [[cite:PUB00015371]].</li> </ul>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: psbP-like protein 2, chloroplastic-like [Cicer arietinum] gi|502121406|ref|XP_004497306.1| | 8 | ||
| – | PREDICTED: psbP-like protein 2, chloroplastic-like [Glycine max] gi|356536494|ref|XP_003536772.1| | 7 | ||
| – | PREDICTED: psbP domain-containing protein 5, chloroplastic-like [Glycine max] gi|356515500|ref|XP_003526438.1| | 7 | ||
| – | PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic-like [Glycine max] gi|356557150|ref|XP_003546881.1| | 8 | ||
| – | PREDICTED: psbP-like protein 1, chloroplastic-like [Glycine max] gi|356499671|ref|XP_003518660.1| | 8 | ||
| – | PREDICTED: psbP-like protein 1, chloroplastic-like isoform X2 [Cicer arietinum] gi|502102481|ref|XP_004492089.1| | 7 | ||
| – | PREDICTED: psbP domain-containing protein 3, chloroplastic-like [Glycine max] gi|356508481|ref|XP_003522985.1| | 7 | ||
| – | PsbP domain-containing protein [Medicago truncatula] gi|357509231|ref|XP_003624904.1| | 7 | ||
| – | PREDICTED: ran guanine nucleotide release factor-like isoform X1 [Cicer arietinum] gi|502093728|ref|XP_004490033.1| | 7 | ||
| – | PREDICTED: oxygen-evolving enhancer protein 2, chloroplastic-like [Glycine max] gi|356526942|ref|XP_003532074.1| | 7 | ||
| – | Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein isoform 1 [Theobroma cacao] gi|508719541|gb|EOY11438.1| | 6 | ||
| – | PREDICTED: psbP domain-containing protein 1, chloroplastic-like [Glycine max] gi|356505763|ref|XP_003521659.1| | 7 | ||
| – | PREDICTED: LOW QUALITY PROTEIN: psbP domain-containing protein 1, chloroplastic-like [Glycine max] gi|356571066|ref|XP_003553702.1| | 13 | ||
| – | Oxygen-evolving enhancer protein 2-1, chloroplastic; TAIR: AT1G06680.1 photosystem II subunit P-1; Swiss-Prot: sp|Q7DM39|PSBP1_TOBAC Oxygen-evolving enhancer protein 2-1, chloroplastic; TrEMBL-Plants: tr|A0A151U238|A0A151U238_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0046600 | 7 | ||
| – | Oxygen-evolving enhancer protein 2-1, chloroplastic; TAIR: AT1G06680.1 photosystem II subunit P-1; Swiss-Prot: sp|P16059|PSBP_PEA Oxygen-evolving enhancer protein 2, chloroplastic; TrEMBL-Plants: tr|A0A0L9UVJ1|A0A0L9UVJ1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0046600 | 7 | ||
| – | Photosystem II reaction center PsbP family protein; TAIR: AT1G77090.1 thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein); Swiss-Prot: sp|O49292|PPD4_ARATH PsbP domain-containing protein 4, chloroplastic; TrEMBL-Plants: tr|A0A151TSA0|A0A151TSA0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0272900 | 7 | ||
| – | Photosystem II reaction center PsbP family protein; TAIR: AT5G11450.2 PsbP domain protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein); Swiss-Prot: sp|P82715|PPD5_ARATH PsbP domain-containing protein 5, chloroplastic; TrEMBL-Plants: tr|I3T9M5|I3T9M5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0389800 | 7 | ||
| – | Lumenal PsbP-like protein; TAIR: AT3G63540.1 thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein); Swiss-Prot: sp|P82658|TL19_ARATH Thylakoid lumenal 19 kDa protein, chloroplastic; TrEMBL-Plants: tr|I1KTL9|I1KTL9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0517700 | 8 | ||
| – | PsbP-like protein 1; TAIR: AT3G55330.1 PsbP-like protein 1; Swiss-Prot: sp|P82538|PPL1_ARATH PsbP-like protein 1, chloroplastic; TrEMBL-Plants: tr|I3S322|I3S322_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0533900 | 8 | ||
| – | PsbP-like protein 1; TAIR: AT3G55330.1 PsbP-like protein 1; Swiss-Prot: sp|P82538|PPL1_ARATH PsbP-like protein 1, chloroplastic; TrEMBL-Plants: tr|I3S322|I3S322_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0533900 | 7 | ||
| – | Photosystem II reaction center PsbP family protein; TAIR: AT1G76450.1 Photosystem II reaction center PsbP family protein; Swiss-Prot: sp|Q9S720|PPD3_ARATH PsbP domain-containing protein 3, chloroplastic; TrEMBL-Plants: tr|I3T8K8|I3T8K8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0569700 | 7 | ||
| – | Photosystem II reaction center PsbP family protein; TAIR: AT3G56650.1 thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein); Swiss-Prot: sp|Q9LXX5|PPD6_ARATH PsbP domain-containing protein 6, chloroplastic; TrEMBL-Plants: tr|A0A1J7HRX1|A0A1J7HRX1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0658600 | 8 | ||
| – | PsbP-domain protein 1; TAIR: AT4G15510.1 Photosystem II reaction center PsbP family protein; Swiss-Prot: sp|O23403|PPD1_ARATH PsbP domain-containing protein 1, chloroplastic; TrEMBL-Plants: tr|I3SFZ1|I3SFZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0222700 | 8 | ||
| – | PsbP-like protein 1; TAIR: AT4G15510.1 Photosystem II reaction center PsbP family protein; Swiss-Prot: sp|O23403|PPD1_ARATH PsbP domain-containing protein 1, chloroplastic; TrEMBL-Plants: tr|I3SFZ1|I3SFZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0222700 | 14 | ||
| – | PsbP-domain protein 1; TAIR: AT4G15510.1 Photosystem II reaction center PsbP family protein; Swiss-Prot: sp|O23403|PPD1_ARATH PsbP domain-containing protein 1, chloroplastic; TrEMBL-Plants: tr|I3SFZ1|I3SFZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0222700 | 7 | ||
| – | Ran guanine nucleotide release factor-like protein; TAIR: AT1G69680.1 ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein); Swiss-Prot: sp|Q54ML6|MOG1_DICDI Probable ran guanine nucleotide release factor; TrEMBL-Plants: tr|G7KCJ8|G7KCJ8_MEDTR Ran guanine nucleotide release factor-like protein; Found in the gene: LotjaGi2g1v0305600 | 6 | ||
| – | Ran guanine nucleotide release factor-like protein; TAIR: AT1G69680.1 ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein); Swiss-Prot: sp|Q54ML6|MOG1_DICDI Probable ran guanine nucleotide release factor; TrEMBL-Plants: tr|G7KCJ8|G7KCJ8_MEDTR Ran guanine nucleotide release factor-like protein; Found in the gene: LotjaGi2g1v0305600 | 6 | ||
| – | Ran guanine nucleotide release factor-like protein; TAIR: AT1G69680.1 ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein); Swiss-Prot: sp|Q54ML6|MOG1_DICDI Probable ran guanine nucleotide release factor; TrEMBL-Plants: tr|G7KCJ8|G7KCJ8_MEDTR Ran guanine nucleotide release factor-like protein; Found in the gene: LotjaGi2g1v0305600 | 6 | ||
| – | Photosystem II reaction center PsbP family protein; TAIR: AT5G27390.1 tagatose-6-phosphate ketose/aldose isomerase, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein); Swiss-Prot: sp|P97852|DHB4_RAT Peroxisomal multifunctional enzyme type 2; TrEMBL-Plants: tr|A0A151U524|A0A151U524_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0218600 | 4 | ||
| – | PsbP family protein, expressed; TAIR: AT3G05410.2 Photosystem II reaction center PsbP family protein; Swiss-Prot: sp|F4J7A7|PPD7_ARATH PsbP domain-containing protein 7, chloroplastic; TrEMBL-Plants: tr|A0A151U4S5|A0A151U4S5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0222100 | 11 | ||
| – | Photosystem II reaction center PsbP family protein; TAIR: AT3G05410.2 Photosystem II reaction center PsbP family protein; Swiss-Prot: sp|F4J7A7|PPD7_ARATH PsbP domain-containing protein 7, chloroplastic; TrEMBL-Plants: tr|A0A151U4S5|A0A151U4S5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0222100 | 11 | ||
| – | PsbP-like protein 2; TAIR: AT2G39470.1 PsbP-like protein 2; Swiss-Prot: sp|O80634|PNSL1_ARATH Photosynthetic NDH subunit of lumenal location 1, chloroplastic; TrEMBL-Plants: tr|I3SJS5|I3SJS5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0357400 | 8 | ||
| – | Oxygen-evolving enhancer 2-1, chloroplastic; TAIR: AT1G06680.1 photosystem II subunit P-1; Swiss-Prot: sp|P16059|PSBP_PEA Oxygen-evolving enhancer protein 2, chloroplastic; TrEMBL-Plants: tr|I3T637|I3T637_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0184900 | 7 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SSF55724 | SUPERFAMILY | 1 | 3.03 |