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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0315800 |
| Transcript ID | LotjaGi2g1v0315800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleobase-ascorbate transporter-like protein; TAIR: AT5G62890.1 Xanthine/uracil permease family protein; Swiss-Prot: sp|Q27GI3|NAT6_ARATH Nucleobase-ascorbate transporter 6; TrEMBL-Plants: tr|A0A0B2PS86|A0A0B2PS86_GLYSO Nucleobase-ascorbate transporter 6; Found in the gene: LotjaGi2g1v0315800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:79123430..79127889) extracted from Lotus japonicus Gifu genome v1.2.
GGACTACTATTATAGCTTCTTTTGCTTTTTCCCACACCTTCACACAACCCTTGCATTTGCTGCATTGCATTACTCTCAAA CGTTTCTGACAACAAGGTGTGTCACCTTTATCATGCTCAATGTCCTTTTATAAATTTCCTTCTCCCAAAAGAAAAGTGTT CATTTTCCTCGTCGTCTTGTTTTCCCTACTGTCTCTGTTATCATCATTCTAGGTTTTGTTGAAACAAAAAACCTCAAAAG CTGTTAGAACTTTGTTGTTGTCCCCTTTTTGCTCTGTTGGGTTCTGAAATTTTTTGGGGTTTCGGTTGTTCTAGGTGCAT TTGAAGAAGAATGGCAGGAGGAGGAGCTGCACCACCACCTAAGCAGGATGAGCTTCAGCCACACCCTGTGAAAGATCAGC TGCCAAATGTTTCATATTGCATCACAAGTCCCCCTCCATGGCGTGAGTTCACTGCTCCATTCAAACCATTTTTGAAACTT ACCCTTTTTTCATGGTTGATTATCAGCAATAGTGTATTTTCTTCTGACTGAATCTAGAATTTTACTGTTAATCAATGAAG CGGAGGCTATACTGCTTGGTTTCCAACATTACTTGGTGATGCTTGGCACAACTGTTTTGATTCCCAGCGCTCTAGTTCCC CAGATGGGAGGAAGAAATGTAAGTTTTGACAAGGAAAGAGGAAAAGAAAAGGAAAATGATTTGCTATTATGTTGTGTGGT TTCCTATTTTCTAAGTCTGATAAATCTCTGAATTGTGGTTGTGGTTTAATAGGAAGAGAAAGCATTGGTGATTCAGACTC TGCTGTTCGTGGCTGGCATAAACACACTGTGCCAGACATCGTTTGGGACTCGTTTACCTGCAGTTATGGGAGCATCATAT ACCTATGTGCCAACTACCATTTCAATTATTTTGGCTGGTCGCTACACGGACATTGTGGATCCTATAGAGGTTGGTTCTAT CGAAGCTGCTTGTTTTTTTTTTTACTGCTTTTCCATTTTTGTTATATCACCATCCTTGTTTAACTGATTTGTGGTAAAAA AATGCAGAAATTTGCGAGGATAATGCGTGGAACGCAGGGCGCGATTATGATTGCTTCAGCCCTCCAGATTATTCTTGGCT TTAGTGGCCTGTGGCGAGTTGTAGTGAGGTTGGTTCATCTCAGGATACTAAAAATAATTCCTTCTTCTTATCAGTCACAA TGTGCTTTGTCAGATGTTAAGCAATGTTTTTTTTTCTTAAATTTACTTGTATGGTTTAGGTCTAGTTCTTTTATAATGTG TACTATCCCCCTCTTCGTATGGTAACTCCCAATTAGTGATTATGAATTCTTGTGGAAATCAAATGCAATTACACTGATAT ATTGGATTTTACCTAATCTGAGAGCCATAACTCATTGCATTTGGTTAATAATTTGTTATATTTTTGTTTAGGTTCTTGAG CCCTCTCTCGGCTGTTCCCTTGGTTGCTCTGTCTGGCTTTGGACTTTATGAGTTGGGCTTTCCTATGGTATGCATATTTG CAACAAGACTAGTGCTTATTTCTTTCCTAAGTTTATGAATTATAATTGGTATCATTCACATTTCCCTGGTTATGTCTTTT GAATTCTAGCTTGCAAAATGTGTGGAGATTGGGCTACCACAAATCATAATCCTACTAGCATTTTCACAGGTGATTTATAA CTTCTGTGATGCTAAATTCGATTCTGAGTGCCTTACACCCACCTCGTATGAAATTTTGTTAACTCCAATTATCTTTTTCT TTGTTTCCTCAATTTTAATGTTATATTCTAAAGTAGTGGTGTTTCTTTGCACAGTACATTCCTCATCTGATGAAAGGAGA TAAGCATATCTTTGATCGATTTGCAGTTATATTCTCAGTCGCAATTGTGTGGCTTTATGCTTACATTCTCACCGTGGGTG GAGCTTATAAAAATGCAGAGCAGACAACTCAGGATACTTGCAGAACTGACCGTGCTGGAATCATAGGTGCCGCACCATGG TAAGGGTCTTGTGGTTTTTCTAATAATAAGAATTATTTGTTCATTATCTAGCTGTGTATTTCGGGGGACACAGTTGATGA AACTTGATATTTAGATCATCTTAGATGACAGTAAAAAAAGGATTCAATTTGGTTAACTCCCAAGTATTGCTGCTGACAAA ATATATTAATCAGGATTAGAGTTCCATATCCTTTCCAATGGGGAACTCCAACATTTCATGCTGGCGAGTGTTTTGCTATG ATGGCTGCTTCATTTGTTGCTCTAGTTGAGGTTTGTTATTGTTATGCTTGTAAAGTAGATATGAATTGCTGAATATGTGC AGTGAATTCTGAATTTTGTGCTTTCTCTAGAAGCTTATAGTCGTGATTAACATATTGTCCTCAATGTCCTGCAAGTTTTT GGGCTAGAATCTGCAATATTTTCCTAATTTTTTTAAAAATATATAGAAAACTTGGAGTTGAGGCAGAAGTGACAATATAT GTTTCTCAATAGTCTAGTAATTCCCTTTTTCTGAATTAACACATGAATAACTAAGTGAGTCTCTCCTCAAAATATAGTAT ATTGAAGATATAAGGTGATATTTACAGATATAGTCACTTTTAAGAATTTTAATATGACTTCATCCAACTTGGTCTAGACA AATATTATGAAAAGTAGTATAATCGTGGGAGTGCATGATCCTCCTCAGTCCTCCCTTTCTTTCTTTCTCATTTCTATTCA GTTTGTTGCATGCTTATATAATGGCTCTTTCTCACATCATTTCAATTTTCTACAGTCAACTGGTGCTTTTATTGCTGTTT CAAGGTATGCAAGTGCAACTCCAGTGCCACCTTCGGTTCTTAGCCGTGGTGTTGGTTGGCAGGTAAATAGAATTTAGGAA ATGAAATTATTTTTCTTTATGTGATTTCTAAATCATAAGATCCAACATTTTAAAATTATTTCTGCAATGAAACATTAATG AATGTCAACATGAATACTGAGTTGCTGTTCATATTCAAGCCTTGTCGTTTTTCTTCTTGCGATAATTTTCTGCGATAATT TTGTTTTCTTATTGCTTGTGATCATCATTAACTAGTAGTCTTGTGAATCAGGGATTAGGAATTCTCATATCTGGGGCATT TGGGACAGGGAGTGCATCATCAGTTTCTGTGTAAGATTCTTGATAAAAACTCCCATGTGCTGGGGATATAATTTTTCTTA ATAAGAATAGTATACTTGAATCATTTATAAGAAACATTTTTTCTTTTCCCTAGAGAGAATGCTGGACTCTTAGCTTTGAC ACGAGTTGGTAGCCGAAGAGTTGTTCAAATATCAGCTGGATTCATGATCTTTTTCTCCATACTCGGTAAGCTTATAAGAC TGGTAATTCTGATGTTATTATTTTTCTCTCCTTGGTGAACCGATGTACTTACTATGAAGTGGTTATATGCAGGAAAATTT GGAGCTGTGTTTGCTTCAATCCCTATGCCAATTGTTGCAGCTTTGTATTGCCTTTTCTTTGCCTATGTTGGTATGCATGA TCAAATCAAGAATCTTCCATTCTCTTCTCATATTTTCCTTCAAGTTTGAGTATTCACCCCTTTTCTTCATTTGCTTTTTG TTTTCCTACAACACAGGTTCTGCAGGCCTCAGTTTCCTTCAGTTTTGCAATTTGAACAGCTTCAGAACTAAATTCATCTT GGGATTCTCCATTTTCATGGGCTTCTCTATACCACAATACTTCAAGGAGTACACAGCGCTAAAGCACTATGGTCCTGTAC ACACCCATGCTAGATGGGTATCCAGCTTCTCTTCTTAATCTTATTGTTGAATGTGCATTCTTTTTTATATTAGTTGTTAA AACTTAGAAGAACTAATTCCATGTTCTCTTTTTGGCAGTTCAATGACATGATCAATGTCCCTTTCTCATCAGAAGCATTT GTTGCTGGATCATTGGCACTGTTCTTGGATGCCACATTGCGCAAGAATGACAGCCAAACTCGTAAAGACAGAGGTGCGCA CTGGTGGGACAGGTTCAGATCATACAAGACAGATACAAGAAGTGAGGAGTTTTACTCCCTACCCTTCAATCTTAACAAGT TCTTCCCTTCTGTGTGACTGGATTGGTGAAGTCATAAGACATGCACTCTACAAAGTCTCATTGTGGGTACTACATGTTAT CTAGCTTGGAAGTCTTCAATATCTTCATTCTTAACCGTTAATCAATGTTGTAAATGAATACCTTTGTTTTTGCCTCAGCT TCTTTGCTGTGAAGCTAATAGCTAATTCTCTGCCCTTTAACTTCTTAGAAAGCTTTCCCCACCATCTAGTGAACTCTGAG ATTTAGATGGAATGGTTATTTTTCTTTTGGTACAAAATGGAATAGTTATCGAATAGTATAAAATGCTTAATAGTTATGGG CTTGAACTTTGTGAAGTATAGTACTCCGAGATTTATTTGTTTAGACTTTGATACTTACAA
CDS sequence (LotjaGi2g1v0315800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGAGGAGGAGCTGCACCACCACCTAAGCAGGATGAGCTTCAGCCACACCCTGTGAAAGATCAGCTGCCAAATGT TTCATATTGCATCACAAGTCCCCCTCCATGGCCGGAGGCTATACTGCTTGGTTTCCAACATTACTTGGTGATGCTTGGCA CAACTGTTTTGATTCCCAGCGCTCTAGTTCCCCAGATGGGAGGAAGAAATGAAGAGAAAGCATTGGTGATTCAGACTCTG CTGTTCGTGGCTGGCATAAACACACTGTGCCAGACATCGTTTGGGACTCGTTTACCTGCAGTTATGGGAGCATCATATAC CTATGTGCCAACTACCATTTCAATTATTTTGGCTGGTCGCTACACGGACATTGTGGATCCTATAGAGAAATTTGCGAGGA TAATGCGTGGAACGCAGGGCGCGATTATGATTGCTTCAGCCCTCCAGATTATTCTTGGCTTTAGTGGCCTGTGGCGAGTT GTAGTGAGGTTCTTGAGCCCTCTCTCGGCTGTTCCCTTGGTTGCTCTGTCTGGCTTTGGACTTTATGAGTTGGGCTTTCC TATGCTTGCAAAATGTGTGGAGATTGGGCTACCACAAATCATAATCCTACTAGCATTTTCACAGTACATTCCTCATCTGA TGAAAGGAGATAAGCATATCTTTGATCGATTTGCAGTTATATTCTCAGTCGCAATTGTGTGGCTTTATGCTTACATTCTC ACCGTGGGTGGAGCTTATAAAAATGCAGAGCAGACAACTCAGGATACTTGCAGAACTGACCGTGCTGGAATCATAGGTGC CGCACCATGGATTAGAGTTCCATATCCTTTCCAATGGGGAACTCCAACATTTCATGCTGGCGAGTGTTTTGCTATGATGG CTGCTTCATTTGTTGCTCTAGTTGAGTCAACTGGTGCTTTTATTGCTGTTTCAAGGTATGCAAGTGCAACTCCAGTGCCA CCTTCGGTTCTTAGCCGTGGTGTTGGTTGGCAGGGATTAGGAATTCTCATATCTGGGGCATTTGGGACAGGGAGTGCATC ATCAGTTTCTGTAGAGAATGCTGGACTCTTAGCTTTGACACGAGTTGGTAGCCGAAGAGTTGTTCAAATATCAGCTGGAT TCATGATCTTTTTCTCCATACTCGGAAAATTTGGAGCTGTGTTTGCTTCAATCCCTATGCCAATTGTTGCAGCTTTGTAT TGCCTTTTCTTTGCCTATGTTGGTTCTGCAGGCCTCAGTTTCCTTCAGTTTTGCAATTTGAACAGCTTCAGAACTAAATT CATCTTGGGATTCTCCATTTTCATGGGCTTCTCTATACCACAATACTTCAAGGAGTACACAGCGCTAAAGCACTATGGTC CTGTACACACCCATGCTAGATGGTTCAATGACATGATCAATGTCCCTTTCTCATCAGAAGCATTTGTTGCTGGATCATTG GCACTGTTCTTGGATGCCACATTGCGCAAGAATGACAGCCAAACTCGTAAAGACAGAGGTGCGCACTGGTGGGACAGGTT CAGATCATACAAGACAGATACAAGAAGTGAGGAGTTTTACTCCCTACCCTTCAATCTTAACAAGTTCTTCCCTTCTGTGT GA
Protein sequence (LotjaGi2g1v0315800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGGGAAPPPKQDELQPHPVKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPSALVPQMGGRNEEKALVIQTL LFVAGINTLCQTSFGTRLPAVMGASYTYVPTTISIILAGRYTDIVDPIEKFARIMRGTQGAIMIASALQIILGFSGLWRV VVRFLSPLSAVPLVALSGFGLYELGFPMLAKCVEIGLPQIIILLAFSQYIPHLMKGDKHIFDRFAVIFSVAIVWLYAYIL TVGGAYKNAEQTTQDTCRTDRAGIIGAAPWIRVPYPFQWGTPTFHAGECFAMMAASFVALVESTGAFIAVSRYASATPVP PSVLSRGVGWQGLGILISGAFGTGSASSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPMPIVAALY CLFFAYVGSAGLSFLQFCNLNSFRTKFILGFSIFMGFSIPQYFKEYTALKHYGPVHTHARWFNDMINVPFSSEAFVAGSL ALFLDATLRKNDSQTRKDRGAHWWDRFRSYKTDTRSEEFYSLPFNLNKFFPSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 44 | 44 | - | – | |
| PANTHER | 4 | 533 | 530 | 0.0 | – | |
| PANTHER | 4 | 533 | 530 | 0.0 | – | |
| Pfam | 39 | 444 | 406 | 3.0E-66 | ||
| TMHMM | 40 | 62 | 23 | - | – | |
| Phobius | 45 | 63 | 19 | - | – | |
| Phobius | 64 | 74 | 11 | - | – | |
| TMHMM | 74 | 96 | 23 | - | – | |
| Phobius | 75 | 94 | 20 | - | – | |
| Phobius | 95 | 99 | 5 | - | – | |
| Phobius | 100 | 119 | 20 | - | – | |
| TMHMM | 100 | 119 | 20 | - | – | |
| Phobius | 120 | 139 | 20 | - | – | |
| TMHMM | 140 | 162 | 23 | - | – | |
| Phobius | 140 | 158 | 19 | - | – | |
| Phobius | 159 | 163 | 5 | - | – | |
| Phobius | 164 | 184 | 21 | - | – | |
| TMHMM | 168 | 190 | 23 | - | – | |
| Phobius | 185 | 195 | 11 | - | – | |
| TMHMM | 195 | 214 | 20 | - | – | |
| Phobius | 196 | 214 | 19 | - | – | |
| Phobius | 215 | 219 | 5 | - | – | |
| Phobius | 220 | 239 | 20 | - | – | |
| TMHMM | 224 | 246 | 23 | - | – | |
| Phobius | 240 | 288 | 49 | - | – | |
| Phobius | 289 | 310 | 22 | - | – | |
| Phobius | 311 | 329 | 19 | - | – | |
| Phobius | 330 | 351 | 22 | - | – | |
| Phobius | 352 | 371 | 20 | - | – | |
| TMHMM | 367 | 389 | 23 | - | – | |
| Phobius | 372 | 391 | 20 | - | – | |
| Phobius | 392 | 396 | 5 | - | – | |
| TMHMM | 393 | 415 | 23 | - | – | |
| Phobius | 397 | 415 | 19 | - | – | |
| Phobius | 416 | 426 | 11 | - | – | |
| TMHMM | 427 | 443 | 17 | - | – | |
| Phobius | 427 | 443 | 17 | - | – | |
| Phobius | 444 | 469 | 26 | - | – | |
| TMHMM | 466 | 488 | 23 | - | – | |
| Phobius | 470 | 488 | 19 | - | – | |
| Phobius | 489 | 533 | 45 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0315800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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