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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0334900 |
| Transcript ID | LotjaGi2g1v0334900.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UDP-N-acetylglucosamine transferase subunit ALG14 like; TAIR: AT4G18230.1 UDP-N-acetylglucosamine transferase subunit ALG14-like protein; Swiss-Prot: sp|Q6AY85|ALG14_RAT UDP-N-acetylglucosamine transferase subunit ALG14 homolog; TrEMBL-Plants: tr|C6T8K1|C6T8K1_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0334900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:81097499..81101608) extracted from Lotus japonicus Gifu genome v1.2.
ATAGATACATGCGTGTGAAATAATAATTTCTACTCCTCCTTGATTTTCTCCTGATTTTGTAGCGAATATGCAAGTGTAGC TCGAGCTGATATTTCGAAGCTGCCTCTGATGGACAAAGGCAGCAGCTGCTGCTTGTCTAGTGCATCTTCAATTACTATCC TTTCAAGTGTCATTTTTACTGTCTCCTTGATAGTGGTTCGAGTTCTTTATGTCCTATATTGTAGCAGCAGACCCTTGAGC AAAAGAGCTTTAAAGCCTGTTAGTACACTTATCATTTTAGGATCAGGTTCGAGCTTACTTCTCCCTCTCTTCCGTATCAA AACATTCTATGACAATTCTACAATTTATAGTTTTATTCTGCTGTAGGTGGTCATACTGCTGAGATGCTTAATCTATTGGC AGTGTTACAGAAAGATAGGTTTAATCCAAGATTCTACATTGCTGCTGCTACTGATAATATGAGTCTTCAAAAAGCTCAGT TGCTGGAGAACTCCCTGGAAGCTGAGGTGCTGCTATTTTTTCTTTTGCTATCTATATGTACCTTTTTATTTATTAAGTTC TGTTTTTCTTTTCTTTTTTCTCCTTTTTTCAAGGCGAAGAGGGGTTTCTGCTATATAAAATTGGATAGCTGGTCTGGATT ATTGTATATGTTAGCGACTTAAACAATAGAAGTTCAACATTTATCTTATATTAGTTTTGAAAATTATAGGGATATTAAAG AGGATATTCCATGTACCATTTTTTGTATGGGGATAATACATTGGCGGAAGTGCTGTATATTTGGATATGAGAAGAATTAA ACTTATGATTTTCAATGTGACTACTATTCTACTAATGGTTCAACCTACTGATGCTTAAATAAGTAGATTTGAAGGAGTGC TTCCTAGTCCCATGTAGGTTTCTTGCAGGAGTGTGTCCAGGGATCCAATAGCTAATAGTCATGAGCAGTTCATAGTTATT AGCTATCTGCCTATCTGCTATCAGCCATGGTGGGAATTATTGTCAAATGTCAAATAATAAATTCTCATCAAAATGAGTAT TCTGTATGCCTAGTGTAGGGTTCCAGTATTATTTTGCGTTATCTGCCATTCTTTCTGGTTTGCAGACTTTGAACCTTTTC CAATTGTAGATTTAGGGACTGGAAATAGAGATTATATATCTATATATATATATATATATTAAATATTGCCTTTTGGTTTC CTATTTTCTTCGATTGGCATAGGTGCAAAGTGTGAATAAATTTAATGGGCTCTGAATTTTACTTCTGTTTGGTGTCATTG GGTTACAGATTCTGATCAAGAACATATTTTACTGCAGAATGGATCAAGTGTTACTGGAGCTGCACAGTTCATGAAAATAT ATCGAAGTAGGGAAGTTGGTCAGTCATATATAACCTCAGTTTGGACTACTTTAATTGCAATGGTGCACGCGCTGTGGCTT ATGATTAAAATTAGACCTGAAGTGGTACTGTTTTTATCCTTATTTGATTCTGATAGATACCTGGTAATTGTACTAACAAG AAATAGGGAAAAATCTCCCCATTTTACAAAAAGAGGTTGCGGAACTTTGAGGGTCTGCACCTCCCTAGCCCAAAGGCCTT AATCCCTTACTCAGTTGACAAGATGATTTCCCATTCTTTCTTCCTATTATTTATATCCCATTATTCCTTTCTCCCTAAAA CTATCTCTAACTAACTGGCTGACATACAGTGAAGTCTCCTAACTATACCCCTGAAACATTCACATTCTCCTCAACATGAA TAGCTTGTGGCTGCTGAAAACAAAATCCCACCCTGGTCCTACTGTTTGAAACATGATGACCAAAACACAAATGAAATATA ATAGTGCCTCTGTTCCCATTGATCTTCAGTGCCCCCAGCAATAGCTAGCTCAATGTTTAAAGCAATGGGTTTGAACTTTG AAGTTACCCCTCTCTCTCTCTGTCTCTCCCATAGTATCTCCAATTCCTTGTCAATTGGGTCAGTCATCCTCAATATTTTA TAAGTTACACCACCCTTAAATAAGAGCTGGGTGGCTAGTACAGCCCCCTGCTATTCCTTATCTTGAGCTCTAGTTCAATT TTGTCCCATTTAGATGGGAAGATGAGGTTGTATTCTAACATATGATAAGTTGGCCCAACATCTAGTGATGACCTGGTTTT TCTTTGAAACAATTCCTTCTTTCTCGATGAGGCTTGTTCTACTCTCGTGTAACTGTACGACACACTTCTCATCAGTGGGT GTTCTTGGCCCATTTGTTTTGGAAGGGGTTCATATTGTACCCACTCCATTTTGCTTTTGCACCAATCTCCCTTTTCTGGA ATAGTCACACCGATAATGGTCCACGGCTCCACGCTGCTTCAGGCTGTATTAACCATCTTTGTTTGCATCATGTTTCAACT CTTTTGTCTCCCTTTGTCCTCTGCATAAAGAGCTTCGTTTGATAGTTTTGTCTGTGGACATTTGACTAGCATGCTTAAAG TCTCCCTTCTCTTTGCTCATGTCACCTCACAAAGGATGTTGTCATTCTATAGCAGGATGGCAACCTGCTCTTCCTTTGTC CCTGCCTCCCTGCCATTGAAGAAGTGTTGGCCATTGCATGCATGTCTTTGCGCAGCAATTCCAGTTCCAGCAGAGAAAAC TTGGCCAGCACTACTGACAGCCACAAATTACTATAGCTTTTGATGTCCCATCCTTCTCTATGAATGAGCCTGAGTTCGGC AATTCTGGCAGTGGTGCTGGGTTGTCTGGCAGACTGGCACACGCACAACTTACCCTTCTAAGGCTGTCACTGACTCACTG GTTTATTCCTTCTTTGTTTCATTTTCATTTCTCCTTTGTGACCCCCCACCAAGGACAAAAACATCTCTCCATTTTTTCCT CTATTTGGTTACTCGATGATGACTTTCAAATCCCACATTGACTCTTTTTTTTTGTCTTTGTTTCTCCCCTGCCAATCTGT TTTTAACTTCTTTCTCCCTATACCCTGGGCCAATCATATTCCTCCCCCACCATGGCCATGTATGCATCTATTTCTGCCAT TGTTTTCCGCTTTCACCTCCCCACCAATTGTTTCTTCTCTACCACCATGGTTCTTGATCTCTAGGACTTCATCTTCCCTC ATGTTTTCTTGCTCCCAAAGATAAGATCCTGATTCCTCATCTGTTCATGCTAAGGCTGAAACTCATTGATCAATTCCTTC AAGAAATCCATCATGTCAAGTTTGTTTTACACCAACCCCCATCCCATATACCAAGTGAGAGCACGTACTCTCGAAGCACC CACTCTTAACTTTCTTAATCTTTTGTGCCCCTTGTTTTGAAATGTTGTGTGAGCTGAGTTAATCCTCTGGTAAGCTTTCT GGCCTTGAAATGTTGGTATCTCCATAAATTCCTCCTTGAGTTCACCCCTGAAACTTGCAATATCTTTCCTCAGTTCTTCA AGAATGTGTTTCTTCATTCTTGCTGAACCATTGGCCCGTCCTGGATCAACTTCAAGATGCAATATCACAGCTTCAAAACC AGTTATAGACCTAGTATTGTATTTACCAGAAATAGGGAAAATCTCCCCAATTTACTCAAAGATATTGCAGATTGGGGTCC TTTACCCAAAGGACAAGACTCTTTACTTGTCTTCCTCCTATTACTTATATCATGTATCTCCTCTCTCCATAACTAACTAA CTGACTAACAGTGAAGTCTCCTAACAGATTCTATCATTTATTTATGTTAATATGTTACAATTTGAGTAATCAACTCTTGC TACTATCCAGATACTTTGCAACGGACCTGGGACTTGCATTCCCCTATGCGCAATTGCTTTTATATTTAAGGTTCATATTC CTGTCATTAATCTGTTATAATTCCATCATTTCATTTATCCAATTCATTTGATAATTTATGATGCCTCTGAAGTGTGTTTA AGCTTCTGCGTAGGTGATGGGAATCAGATGGTCATCAATTTTCTACGTCGAGAGCATTGCGAGAGTGAGAAGGCTCTCCT TGAGTGGCCTGCTCCTGTACAAGTTGCGGATGGCTGATCAACTTTTTGTCCAATGGCCACAACTGCAACGACAATATCCC CGAGCTACCTATGTTGGTCGACTCATGTAA
CDS sequence (LotjaGi2g1v0334900.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAAAGGCAGCAGCTGCTGCTTGTCTAGTGCATCTTCAATTACTATCCTTTCAAGTGTCATTTTTACTGTCTCCTT GATAGTGGTTCGAGTTCTTTATGTCCTATATTGTAGCAGCAGACCCTTGAGCAAAAGAGCTTTAAAGCCTGTTAGTACAC TTATCATTTTAGGATCAGGTGGTCATACTGCTGAGATGCTTAATCTATTGGCAGTGTTACAGAAAGATAGGTTTAATCCA AGATTCTACATTGCTGCTGCTACTGATAATATGAGTCTTCAAAAAGCTCAGTTGCTGGAGAACTCCCTGGAAGCTGAGAA TGGATCAAGTGTTACTGGAGCTGCACAGTTCATGAAAATATATCGAAGTAGGGAAGTTGGTCAGTCATATATAACCTCAG TTTGGACTACTTTAATTGCAATGGTGCACGCGCTGTGGCTTATGATTAAAATTAGACCTGAAGTGATACTTTGCAACGGA CCTGGGACTTGCATTCCCCTATGCGCAATTGCTTTTATATTTAAGGTGATGGGAATCAGATGGTCATCAATTTTCTACGT CGAGAGCATTGCGAGAGTGAGAAGGCTCTCCTTGAGTGGCCTGCTCCTGTACAAGTTGCGGATGGCTGATCAACTTTTTG TCCAATGGCCACAACTGCAACGACAATATCCCCGAGCTACCTATGTTGGTCGACTCATGTAA
Protein sequence (LotjaGi2g1v0334900.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDKGSSCCLSSASSITILSSVIFTVSLIVVRVLYVLYCSSRPLSKRALKPVSTLIILGSGGHTAEMLNLLAVLQKDRFNP RFYIAAATDNMSLQKAQLLENSLEAENGSSVTGAAQFMKIYRSREVGQSYITSVWTTLIAMVHALWLMIKIRPEVILCNG PGTCIPLCAIAFIFKVMGIRWSSIFYVESIARVRRLSLSGLLLYKLRMADQLFVQWPQLQRQYPRATYVGRLM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 37 | 26 | - | – | |
| PANTHER | 15 | 233 | 219 | 5.4E-100 | ||
| TMHMM | 15 | 37 | 23 | - | – | |
| Phobius | 38 | 128 | 91 | - | – | |
| Pfam | 54 | 232 | 179 | 1.8E-65 | ||
| Gene3D | 54 | 231 | 178 | 6.0E-6 | – | |
| TMHMM | 126 | 148 | 23 | - | – | |
| Phobius | 129 | 149 | 21 | - | – | |
| Phobius | 150 | 168 | 19 | - | – | |
| TMHMM | 163 | 185 | 23 | - | – | |
| Phobius | 169 | 187 | 19 | - | – | |
| Phobius | 188 | 233 | 46 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Dolichol-linked oligosaccharide biosynthetic process | The chemical reactions and pathways resulting in the formation of dolichol-linked oligosaccharide, usually by a stepwise addition of glycosyl chains to endoplasmic reticulum membrane-bound dolichol-P. |
Expression pattern of LotjaGi2g1v0334900.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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