Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi2g1v0341400 |
Transcript ID | LotjaGi2g1v0341400.4 |
Related isoforms 6 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Isoflavone reductase like; TAIR: AT1G32100.1 pinoresinol reductase 1; Swiss-Prot: sp|E6Y2X0|PILR2_LINUS Bifunctional pinoresinol-lariciresinol reductase 2; TrEMBL-Plants: tr|I3S7N7|I3S7N7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0341400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:81827743..81829829) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAAAGAGCAAGGTCCTTATTGTTGGAGGAACAGGGTACCTAGGAAAGAGGTTAGTGAAGGCATGTTTGGCTCAGGG ACATGAAACATACGTTCTTCAGAGGCCAGATATTGGTGTTGACATTGAGAGAGTTCAGTTGCTTTTGTCATTCAAGGAAC AAGGAGCTAAGCTTGTGAAAGGTTCTTTCAATGATCACCAGAGCCTTGTGAATGCTGTGAAACTTGTTGATGTTGTGATT TGTGCCATATCTGGTGTTCACATCCGCAGCCACCAAATTCTCCTCCAACTTAAACTTGTTGATGCAATCAAAGAAGCTGG AAATGTCAAGGTAATGAACCTTTTAGTATAGGGTCATCACAATCTCATATAGTCACATCACTAAGTCTCCTAAGTAATAT GAAATAAAATCTTATCATACCATATAGTATTTTAAGAAAACTTTTCCATGTTCTACTTATTGTTATGCCATTTCATATTT GATCAAGAAATTGCTTAGTACACTAATGTCATGTTAATATTACATATAATAATGAATTTTAAAATTAACATTTCAACATT TTGAGAAAATGACGAATTCAATTTCTATCGCCTCTCAAGCCTCTTCAGCAATATTAATCACCGTAATATATGACATGTTT GATTTCGGTGCATTGAAATTTGAGAATGCGCGTTACAAGGCTCAGTAAGGTGCAAACATGAAAGGAACTCAAGACCTTTG CTAGCGTGAAACAAAAAATGCACCTAATTTGATATATTATGTTTTATTGAAATTTATCTTAGCCATTGATTAATCATTAC CACTTACCAAAATCAATGGTCAAAATTATGCATGAGAGGGGTTGTAGAGAAGCTTGCCGGAGATGATCCAAATTCGAAAA TGACACCTCAAAAGTTACTTTTAGTAGCTTCTGCAAGAATTACTTCTGTTTTTAACTTTAAAACCTATGAACTTTACAAA TTCACACTAAGTGAAATATATGTATGAACTGCAATTTTGCTGAATTTCTTGCTGTTAAGAATTGACATTCTGTATATATA TGCACAGAGATTTTTGCCATCAGAGTTTGGGACAGATCCAGCAAGGATGGAGCATGCATTGGAGCCAGGAAGAGTAACAT TTGATGACAAAATGGTTGTGAGAAAAGCCATTCAAGAGGCTAACATACCATTCACCTATATTTCTGCTAATTGCTTTGCT GGTTACTTCCTTGGTGGGCTGTGTCAACCAGGGTCTATAATCCCCTCTAAGGAATCTGTGGTGTTGTTTGGAGATGGCAA CATAAAGGGTAACTAATTAGCTATGTGCTTCCTAGTGTTAATAGATTAGGATCAACATCTTCTGTTTTCAACTTAATTTC GAATTCCACGGATAAATTTTTTTCATCCCAATTAAAATAGACATGGTGACAGAAGATTTCGATCTTATATATTGACACTC GCTTTTTTTTATTCCAATTTCACTTTTTTTTCTTTTTATTCCTCATTTTTTTCTAATCACATGACACATAATCTCTCTAG TTTTTTTCTTTCTCTGGGTGTGGGAGGAAATGGGTGTAAGATAACATTTTAGTGTTGTTTTCTACATACTATGTAAGTCA TTGTTTCAAGTAAGTGTCTCTTAATTTGGCAGCTATCTATGTGGATGAAGATGATATAGCCATGTACACCATCAAAACCA TAGATGACCCAAGAACTCTAAACAAGACAGTTTACATAAGGCCACCTAAGAACATATTGTCCCAGAGAGAGGTTGTTCAA ATTTGGGAGAAGCTGATTGGAAAAGAGCTGGAAAAATCTTCAATTTCTGCTGAACAGTTTCTGAGTTCCTTGGAAGGTGA GACATGTATCATTGAATTTGCAAAATCATGTAATATTGTTTTTTTAAAAACTTACTAATAATACTTTTCATGTTGAGAAA CAGGACAAGCATATGCAGAGCAAGTTGGATTGATACATTACTACCATGTTTGCTTTGAAGGCTGCCTGACAAATTTTGAG ATAGGAGAAGAAGAGGTTGAAGCTTGTGAACTTTATCCTGAAATCAAGTACACCACAGTTCATGACTACATGAAACGCTA TGTATAA
CDS sequence (LotjaGi2g1v0341400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAAGAGCAAGGTCCTTATTGTTGGAGGAACAGGGTACCTAGGAAAGAGGTTAGTGAAGGCATGTTTGGCTCAGGG ACATGAAACATACGTTCTTCAGAGGCCAGATATTGGTGTTGACATTGAGAGAGTTCAGTTGCTTTTGTCATTCAAGGAAC AAGGAGCTAAGCTTGTGAAAGGTTCTTTCAATGATCACCAGAGCCTTGTGAATGCTGTGAAACTTGTTGATGTTGTGATT TGTGCCATATCTGGTGTTCACATCCGCAGCCACCAAATTCTCCTCCAACTTAAACTTGTTGATGCAATCAAAGAAGCTGG AAATGTCAAGAGATTTTTGCCATCAGAGTTTGGGACAGATCCAGCAAGGATGGAGCATGCATTGGAGCCAGGAAGAGTAA CATTTGATGACAAAATGGTTGTGAGAAAAGCCATTCAAGAGGCTAACATACCATTCACCTATATTTCTGCTAATTGCTTT GCTGGTTACTTCCTTGGTGGGCTGTGTCAACCAGGGTCTATAATCCCCTCTAAGGAATCTGTGGTGTTGTTTGGAGATGG CAACATAAAGGCTATCTATGTGGATGAAGATGATATAGCCATGTACACCATCAAAACCATAGATGACCCAAGAACTCTAA ACAAGACAGTTTACATAAGGCCACCTAAGAACATATTGTCCCAGAGAGAGGTTGTTCAAATTTGGGAGAAGCTGATTGGA AAAGAGCTGGAAAAATCTTCAATTTCTGCTGAACAGTTTCTGAGTTCCTTGGAAGGACAAGCATATGCAGAGCAAGTTGG ATTGATACATTACTACCATGTTTGCTTTGAAGGCTGCCTGACAAATTTTGAGATAGGAGAAGAAGAGGTTGAAGCTTGTG AACTTTATCCTGAAATCAAGTACACCACAGTTCATGACTACATGAAACGCTATGTATAA
Protein sequence (LotjaGi2g1v0341400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKSKVLIVGGTGYLGKRLVKACLAQGHETYVLQRPDIGVDIERVQLLLSFKEQGAKLVKGSFNDHQSLVNAVKLVDVVI CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPARMEHALEPGRVTFDDKMVVRKAIQEANIPFTYISANCF AGYFLGGLCQPGSIIPSKESVVLFGDGNIKAIYVDEDDIAMYTIKTIDDPRTLNKTVYIRPPKNILSQREVVQIWEKLIG KELEKSSISAEQFLSSLEGQAYAEQVGLIHYYHVCFEGCLTNFEIGEEEVEACELYPEIKYTTVHDYMKRYV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 312 | 312 | 7.1E-184 | – | |
PANTHER | 1 | 312 | 312 | 7.1E-184 | – | |
SUPERFAMILY | 3 | 270 | 268 | 1.12E-59 | ||
CDD | 5 | 307 | 303 | 4.82203E-76 | – | |
Gene3D | 5 | 296 | 292 | 1.4E-116 | – | |
Pfam | 6 | 269 | 264 | 3.0E-64 | ||
Gene3D | 157 | 308 | 152 | 1.4E-116 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0341400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…