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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0350200 |
| Transcript ID | LotjaGi2g1v0350200.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT4G19185.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q8W4R9|WTR35_ARATH WAT1-related protein At4g19185; TrEMBL-Plants: tr|I3SAS0|I3SAS0_LOTJA WAT1-related protein; Found in the gene: LotjaGi2g1v0350200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:82676220..82683051) extracted from Lotus japonicus Gifu genome v1.2.
GGTTGACTTGATGAATTTATGTGTGGTGTGATGTGAGTGTTGTGTGGGAATTACATATACTTGAAATGGCAACACCTTCT TCTTCTTCAGGGTCAATGGGAGTTAAAGATACATGGAAGTCCCATTTGGGCTTGGCGATGGTGCAGCTATTCTATGGTGG CTACCATGTCATCACCAAAGTGGCCCTGAATGATGGGGTCAACCAACTTGTCTTCTGCTTCTACCGGGATCTCCTTGCCT TCTGCATTCTTGCTCCCATCGCTTTCTTCAAAGAAAGGCATGATATTTCTTCTTCCATTTTTTTCTTCCCTTTTCACCTT TCTTTCAACCCAGAACCGAACTAATTATCCACATGAATGGTTTTATATTATTATTCGTGACACGCCCCCTCATGTAAGAG CCTGTTTTTGGGCTTTCATGTCTGTGCTCGAAGCGTGGATAATGCATTTTCTCATCTACTATGTGCTGAAATTCAACTTT TTATTAGAAGAATTGAGGTTATATATAGAGGCTCTGAAACATGAACTGATTATGCTATATTTCAAAAGCCAAGGGCTGCT GTTTTGAGATATATATGTTTAATTGTGGGTTATCTTCTTATGAATGCACTAGGCACAATGGGTATAATACATATATATTT TTTTACCATTCTAGCCTGGGAAAGGGGGAATCCTAATTAAATTCAACTATGCACTTTTTCTTCCTGCTAAATTTGAAGTA TGCTTGGTATTTAATTACTGATGTAAAATGCCTTATTATTTAAAATCTGGTATTCTGGTTCTAGAAATGTTCTACTTATG CTTGATTGTTGCTAATGGTTCCATATCTGGCTTATTTTGGTTGATGGCAGCAAAGCATGAGTTATACCTGCTTTTTTCAA TTAGATGAGCTACTCACTCAAGCTTAAGAATTGGAATTTTAACTCGAAATTGGTTTCCTTCAATTTATTTCTGATGTGTG AGTATCCTAATCCTTGCTGACTGTAGACAAACAAGACCGCCTATTGATAAGAAGCTATTGATGTCATTCTTCTTTCTTGG ATTAACAGGGTAAGGGTCTTGCTCCAGTTCATATTTTTGTTTTATATGAAATACATAGTGTTCTGTTCATGCATATTATG TTTGTTTGATCAGGATATTTGGCAACCAGCTCTTGTTTCTCATTGGTTTAAGTTATACAAATCCAACTTATGCTTCTGCT GTACAGCCAGCCATTCCAGTTTTTACATTTCTGTTTACCGTGATAATGGAGTTAGTTTCACTTTTACCATTTTCTATCTG AGTGTTTTATGTATGTTGTTCATGAAAAGCACCAGAGAGACCGTACTAGGTCCATTTAGGGATGTCGTCAATAGATACGG ATGGACATGAATAGTACATATATGCCGGCCACCCACCCGTGGGTAAAAATGCACGCTCGTACCCCTTCCATACCCACATG AATATCCATTAAGTGGATTTTTAACGGGTTCAACAATATTCACGGGTATCCATGGTCACCCATGGATATATATTTGTCAA TATTTATTAAAATACAAACTTAAGTAAAAGTACATTTAAGATAAATAAAGGATTTTGAAATTAGAACAATACTATAATAC TAAAATTATTCAGTTCAGATACTCCAGGACATAAAGTAATGTGTAGCTTAATATACTTATTCGTGCAGTACAGAAAGCGT GAACTTGCTCAGATGTGAAGGCCTGGCAAAGGTTGGAGGAACTGTTATCTGTGTTTCAGGTGCCATATTGATGGTTTTTT ATCGTGGTCCAGCAGTCATAGGATATAGAGACGGGGGCCATGAAACACAAAGTGAAATCAGAGCCAGAGGTCAGACAGAG CCTTCTGGATGGTTAATCAGTGGTTTACAAGATCTTGGATTAGACCATTTTAAACTTGGTGTCATTTGCTTGATAGGGAA CACTTTGTGCATGGCTGCTTTTCTAGCTTTTCAGGTATCTATTCTAGCTTTCGAATTTTCCTCTTCCCCCTTTTCCCTTC CAACAAAAAACACACTACAACAAAGCTTTGATGTTTTTCATTTGATTAAACCAATCCTTTCATACAGGTTATCCCTTTTA ATGACCTATTGCCAGAAGCACCAATTAGGGTCATTAAAATTCTCTTCATTAATAACATTAGTTAAGCTCACTCTACAACT TTTGTGAAGCAATTTATTGTGAACTTGTGATCCTAGATTCTTTTATTTGTGACATTGTCAGCGAGTTTTACTTGTGTCCA TTAATTATTTTCAGGCACCAGTATTAAAAAAGTATCCTGCAAATCTCTCTGTCACAACATATTCATTCTTCTTTGGAGTT GTACTAATGGTGATAATGTCGTTGTTCATTACTGATGGACCGAGTGATTGGATTTTGACACAATCAGAAATACTTGCCGT TATTTATGCTGTGAGTCACTCAAAATTTCAAATCAATCTTCAATATCACGACTCCTTATATTAGTCATTGCTATTGCGGA TTCTCTGGTCCATTTTACTTCATGGAACTGTTATAGCCACCGTCATGCTTGACAAGTTAAAAAACCAAGTTTCTCTAAAG CATTCACAGGCATGAGGCATGTTTTGTAGCATCCAAGCAAGTTTGACACCATCTAAGTTGCATGAACCGTGTAAGACCTG GATTTTCAGAACAAGCTAATTTCCGACTCACGCGTAGAATCAGTGTAAGCGTGACAGGAGTTTGATATTTGAGAAAGATT AATGAAGAAGAAAGTTCAGGAATTGCTTGAGGAATGTTGCGTAGTCATTTTAGGAATTAGAGCGAGTCGTCTGCACACCC GCCTTATGGCAAGCGTGTCCAGAATAGGCTAATTTCGCTTTAGAGCAACGTTTTAAGTGAGATTTCGAATCCTTGGGAAA TTTAAAGATTTTCTTTATTTTTCCTTCGACCAGCGTTTCATTTCGGAACTCTAGACTGTACGCACGATAGTATTCACTTT TCGGAAGTCCGACGACGCTAATTTCCTTGCTTCGAAACCCTAGATTCGAGCGATGGATGAAGACTTTTTCTATTCGGGAC TTCTAACGAAGTTTCCGTCCGCGCTGCCAGATTTGTTTCGACATTTCCAATCTTTCTTCAGAAGGAAGTTTTGCCGTCTG AGCATCATAGCAAAAAGTAGTTTAACGGGACAGATTAACTTACACCGCCTTTGGGATTTTAGATATCGTTTTTCCCAAAT CATAGATAATTGTTTTGAGTTCTGGAATTCTGACGCCAGAATCTCTCTTAGAATTCCTCGGTGGACGTGCTGCAAAAATC GGAATCGCGAAATTTTCATTTTCCCGCGATTTCACCTGCCTATAAATAGCTCGAAAAAGCAAAATCTCTTCATTCTCACC CATTCAAGGCCGCGAGCAAGGAGAGAGGAGGATAGGAGAAATTTTCGCGAAAACTTGACCAATCTTCGTGCAGTTCGTCC CTACTTCTAGGTATTGAGGTAACTAGCATGAATCCTACCTCTGTTTACTGTTTCTGTTGCGTTTCTGAAGTCGTTTCTGT GCTCACAGTTTTGAGCTTTTTCTAAAATTGTCCGATTTCCTTGATTTCTTGGTTGGGTTATGTTCCTTATGTTCCCATGA GTCTAAAACCTCTGTCAGTAATCGCCGATTGCGATTCAGTTGTCCAAGATCTGAAAAATTGATTCAAAACCCCATTAGTC GCACATTTCGAAACTTTATTGTCGAAAAGCTGTAATCTGACTTCGTGCCTTTAGGATTTGTTGTCACGGATGTCATGAGG ATCAATGCTGTCAAATTTGTTTTCCGAACTGATAACTTTGAAGTTTTGAGCCTTTATTTTGGACCAAAATGCCCCTGGAT AGTCGTATTTCGACCCGATTGTCCGAAAATTGTTCCGACAATTTCTTTGCCTTAGTTTTACCCTAAAACTACCTTGTGAA TTGATTTAGATCGAAGAAAAAGTTCGAAAACCCTATTTTCCATAGTGGCCGAAACCTAATTGCTTGGGTACCGTGTCCAA AAATAATTTTTGGGTCTCTATGACCTGAGCCATTGCGTAGCTCTTTCAATTGTCGAAATTTTGGCGCCGGTTTCGTGTCA TTCTGAGTTCTGTAGCTCGAGTTATGCTCGTTTTAGCGAACGAAGTCTCCGTTGTCAATTTGTGCCTAAATAGGAACTCT GAAGCTTTAGAGGCTTTCTTTACGATTTCGATTAGTATTAGTAGATCATGTTGCTCCTAGTGAAGCTTGTGTTGATGATT GTGTTTTCTTTGTTCTAGGTTCGCAATTTCCATGCCCAACTTCTACTCACGAAGGTAAGGGTAACTCGGTTTTAGAGCGT CTTTGAGTCTTGCATGCTTTTATCGCACTGCCTGTGTTTGAGATGAAGATGTTTATATTGATTGGCAGATGATTATGATT ATTATGCTGAATTTGGAAAATGTTTTCTGAGAGGCTTCGGCCGTTTACTGGTTTCTGTCGTTACTGCTTCCTAGTGGATG GAACATGTGGTTACTTTGGATTGGTCCTTGGGTGGGCTTTGTTATTGTCTGACTTGGCATATAGGGCTTGAGTCAAGTGG CGATGAGGAGGTGTGTCCTATCATTGTCCCATCTTGCGAGATGCTAAGTGGCGATCAGGAGGTGTGTCCTATGATTGTCC CGTCTTGTGTGACGTTAAGTGGCGATTAGGAGGTGTGTCCTATGATTGTCCCGTCATGTATGACGTTATAAGTGGCGATG AGGAGGTGTGTCCTATCATTGTCCCGTCTTGAGAGACGATATTGATCGATCCATTTTGTTAGCAGCATATAGTTGCATTA TAGGGAACTAACACCTGACCCTATGTTGTTGGATTTTCGTATTGGTTTATTGATATCTGATTTGATGTTACATTGTTGAG GTTATTATTATCTGAGTCCGATTTATGTTTAAGTTGTTGATATATGAGTTGAGTTATGTTGCTAGTTATTTACCATGCCA GGTAATTAAATTCGAACAGCATGATTTTTCTCTTTTATACATGGTAATTGCATGGAGTTAACCCTTTCTATTTGCTACTT GTTGTTTGGGCGCTTAACGCTATTAGGCGATGGAGATCCTTCCGCCGAGGCATAGCTACTCGAGTTGGAGATCGAGTTGT AAGCGGTGGAGTAGAGGTATGAGAAGCAGCTTTGCTTCTCTTCTTGTGGATTATGTTGGAGTCTCTTTTACTTTATGAGA ACTCTGTTATTAAAGTCTTGCTTCCGCCACTGTTAAAGTGCGCATGTTTATTCTGAACCTTACTTATGGTATTGTAAACT ATTATTACTGTATATCGGGAAACAAGTTATCTAAATAAAGTTATGGTATGTTTCCAACCTTTTAGCCGAAGTGTTTAGTT GTTTTACAGAAAAAAAATTCCCTTGGTTTTTAGGGATTGCAGATTGGTCCTTAGACTTTGTTAGGTTACTAATGTGACTC TTTAGTTGAGAAATTGGGGTGTTACAAACCGCTAGATAGGCTACCTTTTAGTTGCATATATAAGAAACTAAAGTTGACAT TTCCCTTATCTATAGTTGAGAAAATATGATGGGAGCAGTAACAGTTTTATTTTTTTAAAGTTGTAATAGTTGAGAATGAG ATGGAAGCAGCAATAGCTGAGAATAAGATAGGATTTAGCTGTTATGGTTCAGCTATTTGTACTGTCTTGTGAAGCAAAAT GGAGGGAATAAATAATTTGCAGTGTCTTGCACAAAGTCAAAGAGTACATTAATATGTCATCGAAAATTGTATTTAGGTAA TGTACCTGAGGCAGTGAACTAAGAAATGAAAGCTACTGGAGTAAAGCAAAGAGGTCTTTTTTTAATGGAGGAAAAGATTG AAAGTATCCTATGTTCTAATTGATTATTTTGGTGGAGTTTTAACATGTGGACTGTGACTTTCCTTATTTACTCAGGGAAC TATTGCATCTGCTCTTAATTATGGAATCATGACATGGAGCAACAAGATCTTAGGGCCAGCTTTGGTTGCTCTTTACATGC CACTTCAACCTCTTTTTTCTTCTGTAATGTCCCAGATTTTCCTTGGAAGTCAAATATACATGGGAAGGTATAGCTCCTAT TACTTTCAGTTATTGATTCATTTTGTTCCAACTTCTCAAATGGACATTTAAAAGTTTCCAACTACCAATAACAAAGTATA AGACATTAAGAATGAGAAATTGCAATCCATCACTTGCTTAGGACTTAATAAAATGTCTTATGACTCTTATCTAGTTGAAT TTGATAAAGTTCTTTCATGCATTCTAAAATTATTTTATTTCAGAAAATCTTATTATTCTTGGTCTTTTTTTCCGTGTGAT GACAGTATTATAGGGGGATCTTTTATCATTGCTGGTCTATTTGTGGTTACTTGGGCCTCCTATAGAGAAAGACAGGCAAC TGCTGGAGTTACACCTGGTTCTTGGGTCTCTGAACCACTTCTTCATGGAAAAATTGCAGATCATATAGACCACCTCTTTT CGGGGTCCTCTAGCGTATCCCCGAACCCAAAGTCCTCAGATTAACATGTTTGGATTCACTTTTAAGTTTGTGAGAATCAC ACTTCTGCCTTCATGAAAACTAGGCATAATAGCTTCTTTCAGAATCACTTCTTTCCGAATGAGGAAATCCATCGTGTTTC CAAGCACACCATAGGAAAATAAATTACAGAATGCCAACAAGGCTTTGTAAATATTGGTCTTGTGATTCTTCAATCTGTTA TTGCTATCATTTTAATTGGAAACTCAATACTTGATGAAGTATATATATGTGGAGTGTTTGTTTGAGCAAAAACTTTTATT AAAATGCTTCAAGAAGTTATATGAAAGTAATC
CDS sequence (LotjaGi2g1v0350200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACACCTTCTTCTTCTTCAGGGTCAATGGGAGTTAAAGATACATGGAAGTCCCATTTGGGCTTGGCGATGGTGCA GCTATTCTATGGTGGCTACCATGTCATCACCAAAGTGGCCCTGAATGATGGGGTCAACCAACTTGTCTTCTGCTTCTACC GGGATCTCCTTGCCTTCTGCATTCTTGCTCCCATCGCTTTCTTCAAAGAAAGACAAACAAGACCGCCTATTGATAAGAAG CTATTGATGTCATTCTTCTTTCTTGGATTAACAGGGATATTTGGCAACCAGCTCTTGTTTCTCATTGGTTTAAGTTATAC AAATCCAACTTATGCTTCTGCTGTACAGCCAGCCATTCCAGTTTTTACATTTCTGTTTACCGTGATAATGGATACAGAAA GCGTGAACTTGCTCAGATGTGAAGGCCTGGCAAAGGTTGGAGGAACTGTTATCTGTGTTTCAGGTGCCATATTGATGGTT TTTTATCGTGGTCCAGCAGTCATAGGATATAGAGACGGGGGCCATGAAACACAAAGTGAAATCAGAGCCAGAGGTCAGAC AGAGCCTTCTGGATGGTTAATCAGTGGTTTACAAGATCTTGGATTAGACCATTTTAAACTTGGTGTCATTTGCTTGATAG GGAACACTTTGTGCATGGCTGCTTTTCTAGCTTTTCAGGCACCAGTATTAAAAAAGTATCCTGCAAATCTCTCTGTCACA ACATATTCATTCTTCTTTGGAGTTGTACTAATGGTGATAATGTCGTTGTTCATTACTGATGGACCGAGTGATTGGATTTT GACACAATCAGAAATACTTGCCGTTATTTATGCTGGAACTATTGCATCTGCTCTTAATTATGGAATCATGACATGGAGCA ACAAGATCTTAGGGCCAGCTTTGGTTGCTCTTTACATGCCACTTCAACCTCTTTTTTCTTCTGTAATGTCCCAGATTTTC CTTGGAAGTCAAATATACATGGGAAGTATTATAGGGGGATCTTTTATCATTGCTGGTCTATTTGTGGTTACTTGGGCCTC CTATAGAGAAAGACAGGCAACTGCTGGAGTTACACCTGGTTCTTGGGTCTCTGAACCACTTCTTCATGGAAAAATTGCAG ATCATATAGACCACCTCTTTTCGGGGTCCTCTAGCGTATCCCCGAACCCAAAGTCCTCAGATTAA
Protein sequence (LotjaGi2g1v0350200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATPSSSSGSMGVKDTWKSHLGLAMVQLFYGGYHVITKVALNDGVNQLVFCFYRDLLAFCILAPIAFFKERQTRPPIDKK LLMSFFFLGLTGIFGNQLLFLIGLSYTNPTYASAVQPAIPVFTFLFTVIMDTESVNLLRCEGLAKVGGTVICVSGAILMV FYRGPAVIGYRDGGHETQSEIRARGQTEPSGWLISGLQDLGLDHFKLGVICLIGNTLCMAAFLAFQAPVLKKYPANLSVT TYSFFFGVVLMVIMSLFITDGPSDWILTQSEILAVIYAGTIASALNYGIMTWSNKILGPALVALYMPLQPLFSSVMSQIF LGSQIYMGSIIGGSFIIAGLFVVTWASYRERQATAGVTPGSWVSEPLLHGKIADHIDHLFSGSSSVSPNPKSSD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 13 | 383 | 371 | 4.5E-196 | ||
| PANTHER | 13 | 383 | 371 | 4.5E-196 | – | |
| TMHMM | 19 | 36 | 18 | - | – | |
| Phobius | 21 | 41 | 21 | - | – | |
| Pfam | 23 | 160 | 138 | 1.0E-16 | ||
| Phobius | 42 | 46 | 5 | - | – | |
| TMHMM | 46 | 68 | 23 | - | – | |
| Phobius | 47 | 69 | 23 | - | – | |
| SUPERFAMILY | 53 | 161 | 109 | 3.01E-9 | – | |
| Phobius | 70 | 80 | 11 | - | – | |
| TMHMM | 81 | 103 | 23 | - | – | |
| Phobius | 81 | 104 | 24 | - | – | |
| Phobius | 105 | 109 | 5 | - | – | |
| Phobius | 110 | 130 | 21 | - | – | |
| TMHMM | 113 | 130 | 18 | - | – | |
| Phobius | 131 | 141 | 11 | - | – | |
| TMHMM | 142 | 164 | 23 | - | – | |
| Phobius | 142 | 162 | 21 | - | – | |
| Phobius | 163 | 204 | 42 | - | – | |
| Phobius | 205 | 225 | 21 | - | – | |
| Pfam | 207 | 344 | 138 | 1.6E-14 | ||
| TMHMM | 208 | 230 | 23 | - | – | |
| Phobius | 226 | 236 | 11 | - | – | |
| Phobius | 237 | 258 | 22 | - | – | |
| TMHMM | 237 | 259 | 23 | - | – | |
| SUPERFAMILY | 244 | 349 | 106 | 2.75E-9 | – | |
| Phobius | 259 | 269 | 11 | - | – | |
| Phobius | 270 | 289 | 20 | - | – | |
| TMHMM | 272 | 289 | 18 | - | – | |
| Phobius | 290 | 295 | 6 | - | – | |
| TMHMM | 296 | 315 | 20 | - | – | |
| Phobius | 296 | 319 | 24 | - | – | |
| Phobius | 320 | 324 | 5 | - | – | |
| Phobius | 325 | 346 | 22 | - | – | |
| TMHMM | 325 | 347 | 23 | - | – | |
| Phobius | 347 | 394 | 48 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0350200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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