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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0386800 |
| Transcript ID | LotjaGi2g1v0386800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sec14p-like phosphatidylinositol transfer family protein; TAIR: AT4G36490.1 SEC14-like 12; Swiss-Prot: sp|Q94A34|SFH12_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH12; TrEMBL-Plants: tr|Q94FN0|Q94FN0_LOTJA Phosphatidylinositol transfer-like protein IV; Found in the gene: LotjaGi2g1v0386800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:88254672..88260147) extracted from Lotus japonicus Gifu genome v1.2.
GGATAAACCATTTATTTAACCCCCTCTTATATCACTTCTCTCTCTTTTCTTCTCCCTGCTTCCCTCCCTCTCATTTCAAG AGGTAAATTTCAACCTTCATGCATCCTCGTCTTCTCGTTTCTCTCATTCCCTTCAATCTGTCCACGTTCCTTTTCATGCA TGCTAATGCAAATTCCATTAGACACATTTTTTTTCCTATTCTGGAATTTTCCTAGATATAATGCAATTAGGCAAAGGAAT GCATGGTGAATAATATATAGAGGAATTGATTGATCATGTTGTTATGGTTGCAGGCAGGGCAATTGGGAGTGCTTTTGTTC TCTGCCTCGCATGATATGAATCCTTAATTCTTCACCAATCAAACCAATCCAACCGACACCATGTCTGAACTTCTCTCTTC AGGGACCGGTACGCTACCTTAGTTATTCTATATTTGACCGTTTTCATTTTCCTTGGTTACCTTCCTTAAATGACATGTTT GCCTCTTCAATGTACTTAATTGTCTTTCTAGTGTTTCATTTCATATAAGATAATCGCCTCTTCAAAAAAATTGATGTTGT TGTTGTAGATTCTTTTAAGAAGAAAGCAATCAATGCCTCAAACATGTTGAGGAATTCTTTGACGAGAAAGGGCAGGCGAA GCAGCAAGGTCATGTCCGTTGAGATTGAGGATGTCCACGATGCTGAGGAGCTCAAAGCTGTTGAGGAGTTCCGTCAAGCT CTTATTTCGGACGATCTTCTCCCGGCGAAACATGACGATTATCATATGATGCTCAGGTCAGGTCACTTTTCTTCCTATGC TTTGCACTCATGGTGTTTGGTTTAATGACCATCATAGATTATATAGTCTTGTCTTGCACATCATGTCATGTCACAGATTA TAAGAAGTAAGAGCTTGGAGTTTTTTTTTTCTCACTTTGTGATTGTATTTTGTTGTGTAGATTCCTCAAGGCCAGGAAAT TTGAAATTGATAAATCAAAGCAAATGTGGTCTGACATGCTCAAATGGAGGAAAGAATTTGGTGCTGACACTATTGTGGAG GTACATGTAACAACATTTTGTGAGGCTTCAGCTTCAGGGGATTTGCTTTATTTTTGCACATACAAAAGCTATCTTTTCCT TTTTTCAGTTTTTAACTAGCTTCATTTCTCTTCTTTACTCTTTTTTTTCTTCCAATTCTAGGAGTTTGAATTCAAAGAAA TAGATGAAGTGTTAAAATATTATCCCCAAGGACATCATGGAGTAGATAAAGAGGGACGACCCGTGTACATAGAGCAATTG GGACAAGTTGATGCCACCAAGCTAATGCAAGTTACAACCATGGATCGCTATATCAAATACCACGTAAAGGAGTTTGAGAA GACATTTGATTTAAAGTTTGCAGCTTGTTCGATTGCTGCGAAGAAGCACATTGATCAAAGTACGACTATCCTGGATGTGC AGGGCGTGGTACGCATGAGAAATAGTTAATTATATATGCCTGATGAATGTGATAATTAAAAAGAAAAATATAAAATTTAA CATGTTTCAGCAAAAAGAAAAAGACAAAAATGTACAATTTTCATTTGGTTCATTTCACTTCACAACTTTTAAGGTAGCAT ACATGAGTTGTGAGATAGTATTTTAGTAACACAAAACTGAACCCTGATATCCATAGTAAAGAAAAATTTGAAAATTAGAA GTTGCTAAACTTCAATATTGTATCAATGCCACAGGGGCTTAAAAGCTTCAACAAACATGCTAGGGAACTAGTTACTCGCA TTCAGAAGGTTGACGGTGACAACTACCCAGAGGTGTGTTTTTCTACATTGATTAAATTATGGGGACAAGAGTTTTGGTTG TAAATAAATATCGTGGATATCTGAGTAATATCATGATATTGGTTGCTCCACTGCAGACCTTGAACCGCATGTTCATCATC AATGCAGGTTCTGGATTTAGAATACTGTGGAACACCGTAAAATCCTTCCTTGATCCTAAGACCACAGCAAAAATTAATGT GAGACCTTATTCTAAATATGCTTGTTTTATTAGGCAAATAAAATTATCAATCATGTTACTGAAACTTATAATTTGTCAGG TCCTTGGCAACAAGTATGATACTAAATTGCTTGAAATAATTGATGCCAGGTAAGTTCATGAATTGGTTAAATATCACATT TTTCTTTCTTCATCAAGTCTTCCTATAACATTTACGGAAGGTATTTGATAAGCTTCACCTGCCCATTGATTTTGCGTTGC CAGTGAACTACCAGAGTTTTTAGGAGGTACCTGTACATGTACTGATCAAGGAGGCTGTATGCGCTCCGATAAGGGCCCGT GGAAGGATGAAGAAATACTTAGGGTGGGCCTTCCGTTCTTTTTGTTTATCCTTATTTTCCCCTTGCTTCTATATTTATAA TTTCAGCTAATAATTTTTGTTTTACTATGCATTCTTAAACTTATGTTACTTTATGTAATTGCAGATGGTTCAGAATGGTG CTCACAAATGTTCAAGAAAACCTGAGTCTCATGGGGAGGAAGAGAAACCAATTTCTGAGGTGAGATGGTTCATTTTAAGC TTTGTTAATCTATAGTACATTTTGCTTCTGTTTGAATTTGCCTCTGCAAATGCTTTAGCTGTTCAAAATATTTCCAGTAA CTTTTAGTCCTTTCTGTCACTCATGAATTTTCTCACTAATTAATGAGCATGTTTAGGACAAGACTTCCAAGTTTGACGAA AATCTCACCCCACAGGTTTCTCCAGTTTGTGATCAGGTATGTTAATATCCATTTTTAATCTTGTTAAGACTAGACAACAT AGTCGGGATATACAAATTTTAGTTAACAGTTCTAATGAAAATAAGTACAAAATATTTAATGAGAGTTTTTAAATTGTCAG TTCATTTGAGTATTTTTTTTATGTCAAACTTAATTATTCCAATCACAAATTCAAAAATCAAACATCAGTGTGTCTTTCTT CTTTTGCTCGTCCAATGAGATCAGAACGAGATGAGCAACATAAGGAGAGCAAGATATAAATAACTTGGTTCGGCCTAAAT GCCTATATTCATGGAGGAGAAACTGTGTTTTATAACTCAAAAAAAGATTAAAACTCTCAACTCTCTCTATCAGACTTCAG CCACACTCAAAGCACTCTATGCTCTCTGCCCACTTGGAGCTCAGCTCTCAGCTGAGCACACCAAACTCCTTCCCTCAGCT TTCTACTTATAGAAGTTTGAAATGATCCTTAGCTAAGATGAAGAGGCAAGTGAGCTCGAGCTAAGGTGAAGAGTCAAGTG GCCCTTGGAGGTTGGGATGATTATCCAACAATTCTCCCCCTCTATCCCAAACAAGAGAGAGTGGCACCTGACATCTATCA TCTTGAGATGCCCATCCTAACTATGCCTCAATATAGCTCTGAGCTTCTCACAAGCGACTATCTTCGAAAATATGTCTGTT TAATTCTCTCTTCTAGCTAACCCAAGGTCTTGAAGAAACCACTTCGACCACAATATCTCCTGCCGTAGCGTGTACTCAAC TTCTGTTGTGGATAAGCTTCCAATCTTGATTGTCATGACTCTTATTTAAGGTGAAGGGGCAAGTGATCCTTGGAGTTTGG GATGGATATCCAACAAAATAAACATTTTGTATGTTCTATTTTGTGATTGGATTTTAGATATGGCCTTCTTCTTTTGGAAT TCTGTGCACTATAAAGCAGGTGTTGCGTTGAATTTTTTTCTAGTTTCACTTGACCACAGTTGTATATAGATAAAATTATA TGAAGATCTTGCAGCTTGTAGGTCCTTCTGAGCATATAGAGTTTGTAGGTCTATTGAGCTCCCTCATCATCAATTAACCT GCTGCATTTTTTAGTTTTCTAAATGCCTTGTTTCTTTAGTTCTTACTTTCTGAAAAAACATGAGCTTCACAGGTCCCTGC TGCTAAACTTTCCAAGAACGTGGACGTAATCCCTGTGGCTATCCCCGTGGGTGTCCCGGTGGCTGTTCCAGCGGCTGACA AAAATGCATCGAAGAAAGTTGGTCAGAATGACACAACGTCCAAAGGTACATATATGGTAGATATGATTATAAGATGTGAG ATTCGACATGTATACTTCACACATAATCCAGAATCTATGACTTCAGCCTACCTTCCCAAACTTACATTCTTAGCCTAAGT TTTTCTTTTTATCAATATGTATTCTATATAATAAATCACAACATGGATCAATTAGTTAATTCATCCGTCATCTCGGTAGA TGCTTTTAACCAAAAAACTAGTGATTCCTAAAATGTTTGAAGTCTTTATGCCACCAATTTTGAAGACCTTGATTTAGCAT CATATTCCTATAAACTTATGATTCCTAAAATGTTTAGCATGTCCCTTCTGACCTATTTTCCTACCACTTCCTTCTCTCGT GCAGAGTTTACAACTGTGATGAAACGCATGGCTGAGTTGGAAGAGAAAATGACCACCATGAATCATCAGCCTGCTACCAT GCCGCCAGAGAAGGAGGAAATGCTGAATGCTACTATAAGTCGAGCGGATGTCTTAGAGAAACAACTTATGGACACCAAGA AGGTAAACATGTTAATTTAGACATGAAATTGTTTCAATGAAAGTAGCCAAAGTGCTTACTTCTGATTATTCTTATGGTTT TAAAAATCGAGGTTCTCTCTCCTTTTCCTTCGGACGCGTCTTGTTAATGGCTCTGCTTTCTCAGGCTTTGGAGGATTCGC TTGCTAAGCAAGAGGTGCTTTCAGCTTATGTTGAGAAAAAGAAACAGAAGAAGAAGACGTTTGTATGTATCCCTGCAAAT AGAATATAACTTGATTTTACTACTTGCTACACAATTATTAGGTTACCTTAAGGTTTTGTAATAACAATTTGCCTTTGTAA TGCAGTTCTGCTGTTAAGTGCGAAATAGTGGATGCCAAACAAGAGGTCCATATATTAAAGGAGAGTTGACTTTTACTTTA AGCTTTTTCAGGAGACTCCCAAAGTGCCCTCTTACCATAAGTGTGCAATATGCGTACTAGTAAATCTACATGACGCCAAG AAAAGGATATGCTCAATGTGTGAATTGTATATGCTAATCTGAATTTTTGTCTCTACTAGGTTAGGACTACTTGCTCTCTA TGTATATAGGGCTATGCACAATATGCAAAGCCAGCCCTGTGATGTCCTTACAGGAACAATACATCTAGTGCAAAATTAGA GAGTATGTTTGATTTTTATATACATGGAAATCTACCTCCAACGAATGAGCTCTTTCCTTTTGCTTATGTGACAAGAAAAA AGCATTACTAGTTGTGAGAAGTACAATTGGCCATATTTGTGTGTGAACTGAGCTGTAAATGAAGCAAAGTTTTATTTAAA TATAGAAAATGTGACTCTTGTAAACATTTGTTCAATTACCACAATCAGGGGCTGACATGAACTCATGAAGGCTTTTGGCT TCCTGGCTCTACCTTATTTATAACAGGAGCAATTGG
CDS sequence (LotjaGi2g1v0386800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGAACTTCTCTCTTCAGGGACCGATTCTTTTAAGAAGAAAGCAATCAATGCCTCAAACATGTTGAGGAATTCTTT GACGAGAAAGGGCAGGCGAAGCAGCAAGGTCATGTCCGTTGAGATTGAGGATGTCCACGATGCTGAGGAGCTCAAAGCTG TTGAGGAGTTCCGTCAAGCTCTTATTTCGGACGATCTTCTCCCGGCGAAACATGACGATTATCATATGATGCTCAGATTC CTCAAGGCCAGGAAATTTGAAATTGATAAATCAAAGCAAATGTGGTCTGACATGCTCAAATGGAGGAAAGAATTTGGTGC TGACACTATTGTGGAGGAGTTTGAATTCAAAGAAATAGATGAAGTGTTAAAATATTATCCCCAAGGACATCATGGAGTAG ATAAAGAGGGACGACCCGTGTACATAGAGCAATTGGGACAAGTTGATGCCACCAAGCTAATGCAAGTTACAACCATGGAT CGCTATATCAAATACCACGTAAAGGAGTTTGAGAAGACATTTGATTTAAAGTTTGCAGCTTGTTCGATTGCTGCGAAGAA GCACATTGATCAAAGTACGACTATCCTGGATGTGCAGGGCGTGGGGCTTAAAAGCTTCAACAAACATGCTAGGGAACTAG TTACTCGCATTCAGAAGGTTGACGGTGACAACTACCCAGAGACCTTGAACCGCATGTTCATCATCAATGCAGGTTCTGGA TTTAGAATACTGTGGAACACCGTAAAATCCTTCCTTGATCCTAAGACCACAGCAAAAATTAATGTCCTTGGCAACAAGTA TGATACTAAATTGCTTGAAATAATTGATGCCAGTGAACTACCAGAGTTTTTAGGAGGTACCTGTACATGTACTGATCAAG GAGGCTGTATGCGCTCCGATAAGGGCCCGTGGAAGGATGAAGAAATACTTAGGATGGTTCAGAATGGTGCTCACAAATGT TCAAGAAAACCTGAGTCTCATGGGGAGGAAGAGAAACCAATTTCTGAGGACAAGACTTCCAAGTTTGACGAAAATCTCAC CCCACAGGTTTCTCCAGTTTGTGATCAGGTCCCTGCTGCTAAACTTTCCAAGAACGTGGACGTAATCCCTGTGGCTATCC CCGTGGGTGTCCCGGTGGCTGTTCCAGCGGCTGACAAAAATGCATCGAAGAAAGTTGGTCAGAATGACACAACGTCCAAA GAGTTTACAACTGTGATGAAACGCATGGCTGAGTTGGAAGAGAAAATGACCACCATGAATCATCAGCCTGCTACCATGCC GCCAGAGAAGGAGGAAATGCTGAATGCTACTATAAGTCGAGCGGATGTCTTAGAGAAACAACTTATGGACACCAAGAAGG CTTTGGAGGATTCGCTTGCTAAGCAAGAGGTGCTTTCAGCTTATGTTGAGAAAAAGAAACAGAAGAAGAAGACGTTTTTC TGCTGTTAA
Protein sequence (LotjaGi2g1v0386800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSELLSSGTDSFKKKAINASNMLRNSLTRKGRRSSKVMSVEIEDVHDAEELKAVEEFRQALISDDLLPAKHDDYHMMLRF LKARKFEIDKSKQMWSDMLKWRKEFGADTIVEEFEFKEIDEVLKYYPQGHHGVDKEGRPVYIEQLGQVDATKLMQVTTMD RYIKYHVKEFEKTFDLKFAACSIAAKKHIDQSTTILDVQGVGLKSFNKHARELVTRIQKVDGDNYPETLNRMFIINAGSG FRILWNTVKSFLDPKTTAKINVLGNKYDTKLLEIIDASELPEFLGGTCTCTDQGGCMRSDKGPWKDEEILRMVQNGAHKC SRKPESHGEEEKPISEDKTSKFDENLTPQVSPVCDQVPAAKLSKNVDVIPVAIPVGVPVAVPAADKNASKKVGQNDTTSK EFTTVMKRMAELEEKMTTMNHQPATMPPEKEEMLNATISRADVLEKQLMDTKKALEDSLAKQEVLSAYVEKKKQKKKTFF CC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 363 | 355 | 1.3E-243 | – | |
| PANTHER | 9 | 363 | 355 | 1.3E-243 | – | |
| Gene3D | 19 | 105 | 87 | 2.5E-16 | – | |
| SUPERFAMILY | 47 | 113 | 67 | 2.35E-18 | ||
| Pfam | 70 | 97 | 28 | 2.8E-5 | ||
| SMART | 73 | 98 | 26 | 4.9E-6 | ||
| PRINTS | 76 | 98 | 23 | 1.3E-5 | – | |
| Gene3D | 106 | 318 | 213 | 9.3E-77 | ||
| ProSiteProfiles | 118 | 292 | 175 | 26.793 | ||
| SMART | 118 | 289 | 172 | 2.0E-53 | ||
| SUPERFAMILY | 118 | 313 | 196 | 7.06E-59 | ||
| CDD | 119 | 287 | 169 | 8.26623E-40 | ||
| Pfam | 121 | 287 | 167 | 8.5E-33 | ||
| PRINTS | 245 | 264 | 20 | 1.3E-5 | – | |
| PRINTS | 278 | 287 | 10 | 1.3E-5 | – | |
| MobiDBLite | 317 | 343 | 27 | - | – | |
| MobiDBLite | 317 | 345 | 29 | - | – | |
| PANTHER | 387 | 478 | 92 | 1.3E-243 | – | |
| PANTHER | 387 | 478 | 92 | 1.3E-243 | – | |
| Coils | 441 | 461 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0386800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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