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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0388500 |
Transcript ID | LotjaGi2g1v0388500.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Phosphopantetheine adenylyltransferase; TAIR: AT2G18250.1 4-phosphopantetheine adenylyltransferase; Swiss-Prot: sp|Q9ZPV8|COAD_ARATH Phosphopantetheine adenylyltransferase; TrEMBL-Plants: tr|G7KEY2|G7KEY2_MEDTR Phosphopantetheine adenylyltransferase; Found in the gene: LotjaGi2g1v0388500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:88483934..88484733) extracted from Lotus japonicus Gifu genome v1.2.
TCTATTGCATATAATGTTTCTTCTAGCAGGATTTATATGAAGGAAAACCCTTATTTTTCTTTTCCTACCTTACATGCAGT CTATCAAGCCAGATTTGGAAGTGCAAGCTGTACCAATCACAGATCCGTATGGCCCTTCCATTGTAGATGAAAATTTGGAG GCTGTGATTGTAAGGTTTGTAGTAAGGCCATCTTTGTGTTTGGTGTGAAGTGTCTATTAGATTTTATATATCTGTAGAAG CTTTAAGAAAGGAACTTGTGAGTTGTGTCTTGTGACAAAGTATTTTGTTCCTATTGGCTATTTTTCTGATCTTGATGTTC ATGGTTATAACTGTAGTCTTGCTTTAATGGCAAACTGATTGCAGTATAGACCAAATGTCACAGAACTTTATATATGTTAA GACTTTTAAAGTGTAGATTATTTGATGTACATGTACTAACTGGAGTTGTTTCTCTTACAGCAAAGAGACATTACCGGGTG GATTGGCAGTAAACAGAAAAAGAGTTGAAAAAGGTCTTTCACAGTTGAAGGTCTCAATTTATTTTTTATGTCATTTGGTT ATATTTTCCGTGTAAAATATGTAAGAAAATATATTTCTACTCATGAAAACATTTTTGTTTCACATATTAGAAATTGTTTT CGTGGATCTTATGCATTTTTTTGGTGCAATGGATCATATGCAGATTGAAGTTGTAGATTTGGTCTCTGGAGAATCAGGTG GAACTAAGCTGAGTTCATCAATGTTGCGAAAACTTGAGGCTGAAAAGGCCCAAAAACCAAGCACGATATCACAGTCATAG
CDS sequence (LotjaGi2g1v0388500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGTCTATCAAGCCAGATTTGGAAGTGCAAGCTGTACCAATCACAGATCCGTATGGCCCTTCCATTGTAGATGAAAA TTTGGAGGCTGTGATTGTAAGCAAAGAGACATTACCGGGTGGATTGGCAGTAAACAGAAAAAGAGTTGAAAAAGGTCTTT CACAGTTGAAGATTGAAGTTGTAGATTTGGTCTCTGGAGAATCAGGTGGAACTAAGCTGAGTTCATCAATGTTGCGAAAA CTTGAGGCTGAAAAGGCCCAAAAACCAAGCACGATATCACAGTCATAG
Protein sequence (LotjaGi2g1v0388500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQSIKPDLEVQAVPITDPYGPSIVDENLEAVIVSKETLPGGLAVNRKRVEKGLSQLKIEVVDLVSGESGGTKLSSSMLRK LEAEKAQKPSTISQS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 88 | 88 | 4.8E-20 | ||
PANTHER | 2 | 90 | 89 | 5.3E-44 | – | |
PANTHER | 2 | 90 | 89 | 5.3E-44 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0388500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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