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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0399300 |
| Transcript ID | LotjaGi2g1v0399300.5 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transducin/WD40 repeat-like superfamily protein; TAIR: AT3G50590.2 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q035U1|RTPR_LACC3 Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase; TrEMBL-Plants: tr|A0A0R0LJY8|A0A0R0LJY8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0399300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:89626446..89634944) extracted from Lotus japonicus Gifu genome v1.2.
CGCTATACAGCATCTGTTTTAAAAGAAAAATTGGCAGTCTTGGGTTCATCTGGAGTGTTAGCAGACCATCAGCTTCAAGC TCAATTACAAGAACATCATCTGAAAAGGTGAGTTGAATTCTGCAACTGAGTAAATGAAAGTATGTAATAACTAGTATTTT ATAGAAAAACTGGTGGTTAGTGTCCATTGTGTTAACTATATTTTGCTGTTCTAACTTTAAATCTCCCACCATTCTCGCTC TGATATTTATTCTTGAATCCTGATTGGATACTGGATAGTATTCACTTTTATATGGATACTGGATAGTATTCACTTTACTG AGCAAGAGACATGAGTTATCTGGGAAAGAGTGCCTAACTAGGAAACAATATGAAACAAATGGGCTCTTAGCAGCTTGAGA TTTGAAACTGTTCAAATAGTTTTGTTACCTAATATATGTGATTTGTGACATTTCGTAATTATCTTATGTCATTGTTGACT AAGCAGCCAAAGTCATCCTACAATATCAGACATTGCAAGGAAGGCTTTTCTTTACAGTGTATGTTACTTTCCTATTTTAT CTCTTTGTTAGCCTCAAAGCCAGATACAGACACAATGCCTATTTTACCACTCAATTTGGTAGATCAAGTTTCCTTACGGT CCTGCATTTCATCTCCTTGTTCTCTGACTCAAATTTCATACTTTTACATTATTCCTGTAGCATTTTATGGAAGGCCATAC AAAAAGTGCTCCTATATCTCGCTTACCCCTCATCACTCTTCTAGATACCAAGCATCATCTGAAAGACATTCCAGTTGTCC AGGTAAGGTCCCTGTGACAATTTGATTATAAGACTGATTTATTATCCTTAAATAATTTTTGTTCAATCAACTGATATCAT TCATGCCCTGCCAGCCATTTCATTTGGAGCTAAATTTCTTCAACAAAGAGAACCGAGTTCTTCATTATCCTGTCAGAGCT TTCTATGTGGATGGACCAAACCTTATGGCATATAATCTCTCCTCTGAATCTGAGAGTATCTACAAGAAGCTTTATAATTC GGTAATATAGATAGAGTAGTAAGTTATGTTTAGAAAGTATCATGTTCTCCCTCCAATTTCTATTGATACTATAACTTGAA AGTAGGAGAAATTGTATTATTACTTCTTAATCAGAATACAAAGGGTAATTACATTATATAGAAGAAGACTAATCCTAAAT AAGGAAATAACTAATTATGTACACAATCTCCTAATAAGAGAATAAATCTCCTAATACTGAATATAATCTTCTAATAATAA TTCTTATATTAATTCCTTATTTACAACACCCCCCCTCAAGCTGGTGAATGAATATCTATCATTCCCAGCTTGCAAGTAAG CTCTCGAAACCGCTCCAAGGGAAGTCCTTTGGTGAGCACATCAGCCAACTGAAGTCCTGAGGGGACATACTGTGTAGATA TTAGACCACTATCCAATTTCTCTTTGATGAAGTGTCGGTCTATCTCTATGTGCTTTGTTCTGTCGTGTTGGACTGGATTA TGAGCAATACTAATGGCAGATTTATTATCACAGAAGAGTCTCATGGGAGCTTCATACTTTATTTTCAAATCATCCAGTAT GATCTTCATCCACAACAGTTCACAAACTCCTTGAGCCATGGCTCTAAACTCTGCCTCTGCGCTTGATCTAGCAACTACAT TCTGCTTCTTGCTCCTCCATGTAACTAAATTTCCACCCAAGAACATACAATATCCTGTAGTGGATCTCCTGTCAACAATT GACCCTGCATAATCTGCATCAGTATAAACCTCCATAGACAACTGCTCACTCTTCTTGAACAGCAGACCTCTCCCTGGACT TGCCTTCAGATACTGCAAGATTCTATCCACAGCCTGTAAGTGTCTCTCCTGTGGGTCATGCATGAATTGACTGACAACAC TAACAGGATAAGCTATGTCAGGCCTAGTGTGAGATAGATAAATGAGCTTCCCCACAAGTCTCTGATATTGAGCCTTATCA ACCCTAAGGTCCTCCTCACTACTTCCAATCTTGTGGTTTTGCTCTATAGGCACTCCAATGGGCTTACAACCCAATTTACC AGTCTCTTTGAGAAGATCAAGGACATACTTTCTTTGAGATATGAAAATCCCTTGCTTCGAGTATGCCACCTCCATACCTA GGAAATATTTCAGTTTTCCAAGATCCTTCATTTCAAATTGGGCTGCCAACTGTTTCCTCAGATTCTGCTTCTCAAGTTCA TCATTACCTGCAATGATCATATCGTCTACATAGACTAACAGAAGAGTGAGTTTACCATTTTGAGTATGTTTGATAAAGAG GGTATGATCACCTTGGCTTTGTTTATAACCCAGAGACACCATAGCATTAGTGAATCTCCCAAACCAAGCTCGGGGTGACT GTTTGAGCCCATATAGGGCCTTCTTCAGTTTGCACACCTTATTTCTTCCTGAAGTAGGGTCATACCCCGGTGGAATCTCC ATATACACCTCTTCCTCCAAATCTCCATGCAAGAAAGCATTTTTAACATCAAACTGTTGCAACTCCCAATCAAAATGAGC TGTTAAGGAAAGAATGATCCTTACAGTGTTCATTTTTGCTACCGGAGCAAATGTCTCTTCATAATCAATTCCATAGGTAT GGGTGTATCCCTTTGCAACTAGCCTCGCCTTATACCTGTCAAGTGTGCCATCAGATCGGTACTTCACGGTATAAATCCAC CTGCAACCTACTGTCCTCTTGTCATTTGGCTTCTCAACAATCTCCCAAGTTCCATTTTTGTCCAGTGCATGCATCTCTTC ATTCATGGCTTGAATCCAGTTCTTATCTTTTAATGCTTCTTGTACTGATGTAGGGACTCTAATAGAGTCAATAGCTGAAA TAAAACTCTGATGCTGCACAGAAAGATTTTGAGTAGACACAAACTGGGATATAGGGTACTTGGCACATGAACGTTTTCCT TTTCGTAAGGCAATAGGTAAGTCATCAAGGTTATGCTCATAGGAATTACTAGGCTCAGGGTTCGCAACACTTACCTCAGG ATCAGACGATTGGACTTGTTGTTGGATCAGGACGGGTTTTACTTTCCGCTGGTACTTTATCCTGAACCTGTCAACATTAT TCTGATCTGGTACTACTTCATAACCATTGTCATCATTCTCATCTGGTACTAGTTCAGGACCATTGTCATCATTCTGATTT GGTACTAGTTCAGGACCATTGTCATCATCATCACTGTCCTCAATGATAGGAATAGAGGAAGGCATCAAGGGATCCTGTAA AAGAGGAATAACAGAAAATTCTGGAGACTCAACTTCCTGAGTATTCCCCCCCTGAAGCTGAGGATTGGGATAAAAAGACT CTGATTCTTGAAAAGTAACATCCATGGATATATAGACACGACGACTAGGAGGATGATAACACTTGTAGCCCTTTTTATCT GAGGCATATCCTATAAAGATGCACTTAATAGCCCGAGGATCTAACTTACCCCGATGATGACCGTGAACATGGACAAAGGC GGAACAACCAAATACACGACTTTGAAGACCTGACTTAATGGGCACAGACGGAAAGAAGCTAGTCATAACCTGCACAGGAC TAACACTAGATAAAACCCTAGAAGGTAACCTATTAATTAAATAAGCAGCAGTCAAGACAGTTTCCCCCCAATAAAACTTA GGAACATTCATTTGAAAGAGTAAAGCTCGAGTGATTTCAAGAAGATGACGATTTTTCCTTTCAGCAACCCCATTTTGTTG TGGGGTGTCAACACAAGTCAACTCATGAACCACACCATTTTTTGTAAGAAATTCAGAAAAATTCTTGTTAACATACTCTT TCCCATTGTCTGACCTAAACCTCTTAATAGGTTTCCCAAACTGTGTTCTAATCATGTGGAAAAAGTTAACAAATAATTGA AACACCTCAGACTTATCTTTCATAAGAAAAACCCATGTAATCCGAGTAGAATCATCAATAAAAGTAACAAACCATTTTGC ACCAAAAACATTAGAAATAGACGAAGGTCCCCACACATCAGAGTGAACAAGATCAAAAGGTTGAGCACATTTATTATTAC TAGGAAGAAAAGTTGAACGATGATGCTTAGAAAACTGACAAACATCACAATGAAAAGATTCGACTGACACTTTTGAAAAT AAATGGGGAAACATGGTCCTAAGAATACTAAAAGGAGGATGCCCAAGACGCTTGTGCCGCAACCATATTTGAGAAGTATT CCAGGACTCTGAACTCGTCTGATGACACTTGCTTTCCTCGTGCCGCAGACAGTATAACCCGTCCTGTTCCTTAGCAATCC CAATTATCTGTCCCGTGGCAAGATCCTGAAAAACACCATGTGAGTGGAAAAAGGTTACAACACAGTTCAAGTCTCGAGTG AGTTTATGGATGGACAAAAGATTGTTAGAAAGCTTTGGGACATGAAGCACATGCTTTAAGGGAAGAGATGGACTAAGGTG AATATTACCACATCCCGTAATCTGGTTTTGGGATCCATTAGCAACAGTGATATAGTGTTTTTCAGGGTAAGTGGAATAAG AAGATAAATGTGAGGAGTGAGGTGTCATATGATCTGTAGCACCAAAGTCAATAATCCAGTCATTTTCAGTACTCAAAGCA TTAAGAGATAAGAAGGTAGAACTCTTACCAGTCATTGTGAGAGAACAAGAACCAGAGGGCTTACTCAATGAGTCCATAAA AGCTCTCAGACGCTCCAATTCTGCTTTGCTAAGGCTAGGGACATCTTCTGCTGGTGGTACAGGTGGGACTTCACCATCAT TTTCCATGTCAGAAGTTGTGTGATTTGCGCGCCTCTACGGAGCACCTTTGGACCCCCTCATACGTCTAAGGACGTTTTCC CTTCCATAAAGTTTGAAACAGTACTCTTTGGTGTGACCAGACCTCTTACAGTAAGTGCAACGATCATCACGGTTGAAGAG ATCATCACGGTTGAAGCGATCATCACGGTTGGGGCGATCATCACGGTTAGGGTGTCCGGAAGAGGTGGATCCTTTTATGG GACCCTTTCCAGAGGCTAAGGCTGAACCATCAACTGATTTGTCTTCCACCATCACTGTCCTCCTAGTTTCTTCACCACGA ACTATAAAGAACACCTCTGAGAGAGAAGGGAGTTGCTCTTTACCCAAAACTTGGACCCGAATCGGATCAAATTCAGAGTT AAGCCCAGAGAGAAACTTAAAGATTCGCGCTTTTTCAATAAATTTATTCAATGTTGTGGAGTCAGCATCACACTTCATCT TCAGATTTTGATACTGATCTAATTCAATCCATAGACCATTCAAGGTCCCATAGTAATCTGTCACGGAGAGAGTTCCTTGC TTAGAATTGAAAACTTTATTTTCCAATTCATAACAAGCTGAGAGATCTTGTTTCTTAGAATATGCCTGTGCCAGATTATT CCAAATCTCCTTAGCAGTAGGGAAAAACATATAATTCCGGCTAATTTCCGGAATCATGGAGTACCAAAACCAGGTCATAA TAAGAGAATTCTCTTCACGCCATGTGTCATATTGTGGATCAGTTTTAGCAGGGGCTTTTTCTTCAATATAACTGATTTTC TTACGACTTATGAGAGTGTGACGGATGAGCTCAGACCATTGGAGGTAGTTGCGCCCATCCAAGCGAAAGGAACCTTGTAA TACCGGAAGATCTTTGTGGGTCAAAGGTGGAAGAGAGACTTTCACTCCAGAAGTGAGTTTCTCCTTAGGTATGGGAATCT CGTCTCCAGACATACTGAGAGATGTTACTGTAGAAGGGAAACAAGTGGAAAAATAACAGAAACAGAGAAGATTGCACTCT CCTTGAATGGAAGAACCAAAGGCTTCTCAAGAAAAAACACCAACAAAGTGAGGAAACGACCCTCAGAACAAGACCAAAAG GCACGGGGAACCCTCTCTGTGCAATCGGAGTAACGAACAGAGGATGGCAGGCCGGTGATGAAGAGCACAGGCCTCCAAAC GGTATAAGCCAACAGTGGCAAAACAGGAAACGTTACCAGATAAAAGGGCCGTAATAAGACGGCTAGGGTTTTTTTCGCAG AAGCAGAACTCCCAAGATCGGGAGCTCTGATACCAACTTGAAAGTAGGAGAAATTGTATTATTACTTCTTAATCAGAATA CAAAGGGTAATTACATTATATATAGAAGAAGACTAATCCTAAATAAGGAAATAACTAATTATGTACACAATCTCCTAATA AGAGAATAAATCTCCTAATACTGAATATAATCTTCTAATAATAATTCTTATATTAATTCCTTATTTACAACACTATATCA TTTGCATAATTTTGATATGCTATTACTATTTATATTTTACAAGTGATAATCCTGTTCATATTCAACCTTCTAATGTTCAG CAACTTTGTATAGATTCCGGCGAGTGTAGAGTATCAAGCAAAATACTTGATTTACAGTAAAAAGCAACACCTGTTTCTTG TAGTTTATGAATTTATTGGTATTTCAAATGAAGTTGTGCTTTATCGGGAAAATACTGAAGTAGACATAGCAAACAGTAAA AGCAGCACAGTTAAAGGTATTCATGGCTTAGAAATGCACTTATTTTCTTTTCTTCTGGAGTTTGGTCACGCATTATGTGC AATAATAATTTAGGAAATTTTCTACAGGTCGAGATGCAGCATTTATTGGTCCCAATGAAAACCAGTTTGCTATTCTTGAT GATGACAAGACAGGATTGGCGGTATATATACTACCAGGAGGGCCACAAGAAGCTAAGGAAATTGAAAAAGTTTTTGAAGA AAATTACCAACCTGAAGAAACTAATGTTGATTCAATTCAAGGCCCAACGCCGTTTATGTTTGAAACTGAAGTTGATCGCA TATTTTCTACTCCTTTAGGTGCTTGAACTCATACATATATTCATACATACTTATATAGTCATATATATATATATGTGTGT GTGTGTGTAACTATACATACACATTACATATATATTGCGCGCACGTGGGATCCATTGATACTGGTGTAAATCTAAGTCAG TCTTACACAAATGAATTACCTTGTACCGGGTGAAACTCTGCCAAATCCAGTCCTTATTTTATACATCAGACACATAAAAT TTCATATTAGAGACCTTTTCTTCTCATCAAAAGTCTTTTAGATTAATGTATAGTATACTTCTCAAATAAATGGAAATATC TGCCATTTTTTTCTTAAACCTTTCATGTTTAAATTTCCTGAAATTTAGCTTGCCATATTTACATAATATTTACTCACATA TAAACTGTTGGATTGGTCAAACTATTTTTCTAATAGAAATCATTGAGGATAAGTATATTAAGTTTACTCCATACCACCTG CGCACATGCATTTTTGCATGGTTAGTATTAGTTTAGTAGTATTATAAAGTATTGATTTTTTTTGCCTGGTTGTAGATTCA ACTTTGATGTTTGCTTCTCATGGGAATCAGATTGGATTAGTACAGCTCATACAAGGGTATCGCCTTTCAACTTCCACTTC TGATGGCCATTATATATCAACCAAGAGCAGTGGAAAAAAGTCAATCAAGTTGAAAAGAAATGAGATTGTACTTCAGGTAT CGTTGTAGCTTAATTATGACCAGAATTAGTTGTATACACCCGCTCTTTGCAATTAATTAGAAGAAAAACAGAGATAAGAG TGAAGAAAAAAATAGAAAGTGGAGAGACAAAATGGAAGTTCGGTTATCTGAAAATTCATTTGTTTTCAAACAAAATTATA TATTTTCAAAAAAACTGATCACACTTGATGCCAGCTTAAGATTTGGTAATTTTGAGCAACAAAGTGGATAAAACTTTGTA TCACGTATTGTCACTGTCAAGCTCGCTCAATGTGAATTGCTATGGATCACTGTTATGTTCTGAAGCAGATTATGGGTGGA CACTGAGGATGTCAAAACCTATTATTCCACATTAACATTACCATTAACATAGGTCGAATTTCAACTCCAGACTCTACCCT TACCCATATCTCACTTGGAAGTCTCCCAAAAGTTGTGTTGAGGAATAGTTTTATGGGTTGTTTAGCATTTTGACTGCGTA AAGTTGTTTGCATATAAAATTATTAGGCAATTTTTTGCCTCTGTTCAGAGCTTGTTTGTCTTATGGGTTGTTATATCCAA ATACCTTTATTTATCACCTAGAAAGAAAACTGAAGGCCTCTTTAGAGCCTCGTTTCCCTATGGTAAAGGTCATTACTCGT TACTTATGAGTTCTAGGATTCCTTGTTTGTTGATATAATATCAATTATCAAATGGCTTTTTTGTATGGTTCTGCTTGGTA TCACATATATGTTCAAATTTGGTAGGTGTACTGGCAAGAGACTCTTAGGGGACATGTTGCAGGGGTTTTAACAACGCATA GAGTTCTTATTGTCTCAGCAGCACTTGATATACTTGCAAGCACTTCTACAAATTTTGATAAGGGACTTCCTTCAATATCC TTCAATTGCTATTAATTAA
CDS sequence (LotjaGi2g1v0399300.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGGCCATACAAAAAGTGCTCCTATATCTCGCTTACCCCTCATCACTCTTCTAGATACCAAGCATCATCTGAAAGA CATTCCAGTTGTCCAGCCATTTCATTTGGAGCTAAATTTCTTCAACAAAGAGAACCGAGTTCTTCATTATCCTGTCAGAG CTTTCTATGTGGATGGACCAAACCTTATGGCATATAATCTCTCCTCTGAATCTGAGAGTATCTACAAGAAGCTTTATAAT TCGATTCCGGCGAGTGTAGAGTATCAAGCAAAATACTTGATTTACAGTAAAAAGCAACACCTGTTTCTTGTAGTTTATGA ATTTATTGGTATTTCAAATGAAGTTGTGCTTTATCGGGAAAATACTGAAGTAGACATAGCAAACAGTAAAAGCAGCACAG TTAAAGGTCGAGATGCAGCATTTATTGGTCCCAATGAAAACCAGTTTGCTATTCTTGATGATGACAAGACAGGATTGGCG GTATATATACTACCAGGAGGGCCACAAGAAGCTAAGGAAATTGAAAAAGTTTTTGAAGAAAATTACCAACCTGAAGAAAC TAATGTTGATTCAATTCAAGGCCCAACGCCGTTTATGTTTGAAACTGAAGTTGATCGCATATTTTCTACTCCTTTAGATT CAACTTTGATGTTTGCTTCTCATGGGAATCAGATTGGATTAGTACAGCTCATACAAGGGTATCGCCTTTCAACTTCCACT TCTGATGGCCATTATATATCAACCAAGAGCAGTGGAAAAAAGTCAATCAAGTTGAAAAGAAATGAGATTGTACTTCAGGT GTACTGGCAAGAGACTCTTAGGGGACATGTTGCAGGGGTTTTAACAACGCATAGAGTTCTTATTGTCTCAGCAGCACTTG ATATACTTGCAAGCACTTCTACAAATTTTGATAAGGGACTTCCTTCAATATCCTTCAATTGCTATTAA
Protein sequence (LotjaGi2g1v0399300.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGHTKSAPISRLPLITLLDTKHHLKDIPVVQPFHLELNFFNKENRVLHYPVRAFYVDGPNLMAYNLSSESESIYKKLYN SIPASVEYQAKYLIYSKKQHLFLVVYEFIGISNEVVLYRENTEVDIANSKSSTVKGRDAAFIGPNENQFAILDDDKTGLA VYILPGGPQEAKEIEKVFEENYQPEETNVDSIQGPTPFMFETEVDRIFSTPLDSTLMFASHGNQIGLVQLIQGYRLSTST SDGHYISTKSSGKKSIKLKRNEIVLQVYWQETLRGHVAGVLTTHRVLIVSAALDILASTSTNFDKGLPSISFNCY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 298 | 298 | 1.9E-159 | – | |
| PANTHER | 1 | 298 | 298 | 1.9E-159 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0399300.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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