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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0030400 |
Transcript ID | LotjaGi3g1v0030400.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | TBC1 domain family member; TAIR: AT2G43490.4 Ypt/Rab-GAP domain of gyp1p superfamily protein; Swiss-Prot: sp|Q8BPQ7|SGSM1_MOUSE Small G protein signaling modulator 1; TrEMBL-Plants: tr|A0A0R0H545|A0A0R0H545_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0030400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:3283529..3294851) extracted from Lotus japonicus Gifu genome v1.2.
AAAAACCGTTAAAATGTGTTTAAGACATCATAATTATCCTAATAGCCTTTGGTAAGAGTCATAAGCCCTCATCAAAACCA CCATTAAATACCACAAAGAAACGGTATTCCCCCTTTCAGACTCACCAAATGGCCACCATGCCACGACGGAGCTCCTCCTC CTCCTCCTCCTCCGCCACCAAAACCTGAAACTCCTCTCACAGATCCTCTCTCTCTCGCTACCTAACCCTAACCCTAACCC TTGCTTCATTCTTCTTACCCTTTCGATTCTCTCAAATCCTCTTCTTCTATTCGCATTGCATTGCATTTTTTGCATTGCGT TTTTGGTTTGATTCCCTTTTCTTTACCCTAATTACCTTCCATTTCAGAACCTTCCTTCATTTTTCCATTTCTCGAATAGT TTGCATTTTTTCTGCGATCGAAGCAGAGATGATCTGTTTTCGGTTGAGTTTTGGAATTAGAAATGGAATGGAATGGGATG AAGCAAGCATCATGAAATTTTAGGGTTTTTGAACTGTGTTTGTGTGTGTTTGGTTGTTGACATTGGTGGTGGTGTTTTGG AGAGCTTGGTGTTTGTGTGTGTGTGTGAGAGTCTGATGAATTGTGGTGGCGAGGAAGAGAAGCAATGGAGTTGTGGAAAA GCTGGGAGTGTGAATTTCCGAAAAGTGAGTTCGATTGTTCGCGACATTGGGGATCCTTGCCTCTCTCAGTCTCCTGTAAA GGTTGTTGTAACTGTAAGATAGACTACAAACTCTTCTGGGTTTTATTGAATTCATTTGCTTTGCTTTGCTGTGCTGTGCT TGGATTCACTTCTATGAACTGAGGAGGTGATGTTGCTTAACAAGGAAAAACAAAGTATTGTTTATGAATTGACTTGTTGA ATGATCTTTCATTGTTTATTTTTTATGGAGCAGGTGAACAGAATGCTTAAGCCAGACAAGTGGCAAGCCTTGTCTGATAG TGAAGGAAAGGTGCTTGGTTTCCGGAAGGCGCTGAAATTGATTGTGTTAGGGGTATGCTGTCATTTCTGCTCTGCTCTGT TGTGTTTTTTTTTTTTTTTACTTTTATTTGTCTATAGCATAGCATCATCTTCATCATTCTCACTCGCTGTAATCATCTTC AAATTTTGGATGCTGGGTGCTCATGAATTTAGTGCACATTGTCTTGTTTAATTGGACAGAGATGGGTGTGTATAGTAGTA ATGGTTTAAGGGGCAATGGGCTCAATTCACTTAAAGCAAAATCTTGGGTTCCAGTTGTGTAAATGGAAGAAATAGGACTT GAGAGAGTTTTCTCACCTCAAATAGGTCCTCTAGGCTCAACTTGGAGTAGTGTGGGCACAAAGTGGCTTCTGGGTACTGC TGGGGAACTCAAAAAAAAGAAAAAAAGAAGAAGAAAGCAAAGAAACTTGCCTAACTTTGTTTAATATCAACTTAGTTTAA ACTTTGTAAGGTCGGCAGTGCTTCCTATTTAGGTGTCATTAATTGGTTGCGGTGGTTGCCATTGGCTTGTTGTTCTTGAC TTTTTAATTTCAGATGTACAAAGTGAATCTTATATGACTTAGCCTTAGTGAATCTTTTAATATTATTATTTTGTAACTTT TATCCTACGGCTTGCTTAGGGTAGGTATTTTATAAATAGTAAGTATGATAAATAAAAGGCATTATATCAGGCCTTAACTT CAGTTTGTGGGTGAGTGGGATGTGCCGAACCTATTGTATATTCAGTATGCTGCCTGCACTCTTCCTATTGTCAAGTTTCA ACAAATAATTAGCTCAATCAATAAAATGTTGTTTCCAAGAGAGCATTTATAGGCTAGGCCAATCCACCCTCTAATACTGA ATTTATCCACTTAGAAAATCTGGTCTTCTTACTTCCGTAACACATTTTTCATCATAAGCTTGAGTCCATTTCACCTTTGG TATCTTGTTAAGCCGTTCTACAGCTTTTTGGATTCTCTGTTCACAATGTCAGAATAATGGCTTAAGTTTAGTCGTCTTTT TCATCAATGTAAAACGCATACATCTTTCCTTGGGAGATATCAAACATATGAATTCAAAATTGCTTTCTAAAATTGAAGCT GATATAGACATTGTTGTTCTTTTCTAATTCGTTTCACCTTTCACCCCCCCCCTCTGCCTGTTAGGGTGTAGATCCTTCAA TAAGACCTGAAGTTTGGGAGTTTTTACTAGGTTGCTACGCACTGAGCAGCACTGCTGAGTATCGAAGAAGGTTGAGAGCA GCTAGGAGGTACGGGTCCATCAACTTTCTTTGATTTATTTCTCTCTAGTAGTTTTTTTTTATCTCTAGTATTTGCTGGAT AAACATGCCTATTTTACATATAATGAATGTTAAAGCTATTGTTGTAGCCACGAAAGTCACAGTTTAGAACTTTCTAATTT CAATATTTTTGTTATGGATGAATTTAGCCGTATGTCAATGCTTGCATGAATCCATTCCTTTGGCATCTGGCAACTACTGT GTGTCAATAATTGCAAGTGTGAATGTAAAATGAATTTGGCATTCAATGGCGATATTATGTTTCAGCTAGTTTATTGAATA AATTATTACTACCTCCATTACTTTTTATCTTTCATTTTCAGGTTTTGACACTATATAAATATAATTGCTGTTCTCATTTT TATTGGAACTGTTGTTTAATTTCCTATTGCACCCTCTATCTTCTTTATTAATTCATTATATAGTAAGTGTGTAAAATAAT TTAGAATCAGGTGAAGGTAAGGGTATATAAGTGGTATAGTATTAGTAACAATTGATTTTGTCTTGAACTTTTGAAGTGAA AAAAAAATAGGAGTAAAAGTCCTCTAAAAATGTGATAAATAATTGACATCCATGATGAACTGACCTTGCAGGGAGCATTA TAGTGACCTGGTTAAGCAATGTCAAACAATGCATTCAAGTGTAGGAACTGGTTCGTTGGCATATGTTGTTGGATCCAAAG TTATGGATATGAGAACTTCATCTAAACTTGAACGGGAAATGAAAGGTAAAACATCAACTTCTAATGATAATAATATTGAA GTAGGAAAATATAATGAAAGGAGCATTATTTGTACAGAGGCAGCAAAAGAAGGCCATCATGAAAGCTCCAATGGTTCGGT TGACCTAGCCAGTTTGAGAGCAAGCACAGATGGTGCAACTTATGATTCTTATGGTCAACAAAACTGCAGTTCCCCAAATT TAGGGAGAGAAACAGATGGATCACATTGTGTGATTGATAGTCCTTTTGATTTTCCTGCTTTACCTGTGACCAATCTGTTT GAAAAGAGTGGTAAAGATAACAACTCAAGCACAGAGCATGGCAGTAAACTGTCTGCACGACATAGATTAAGATTTGATGA TGAAATGCATACCTTTCAAATCAATGACAATGTAGACTTAATTGGTGAATCAAATGGCCAACAACCACGGGGTATCTTGC ATTCCACGAACTCTGAAATTGAAGTTGCTTCACCTGATGAGGATGAACCAGAATTCCCATCGGACAATGCTGTTTATGAA GCTCAGATGGTAAATCAACTAAAAATATCAGATGTACCCCAGCCAGCAAGGATAAGTGCCGCAATGTCTCAAGAATGGCC TGTCGGTGAAGATAGAGTATCAGAATGGCTTTGGACCTTGCACAGGATAGGTATCTAAGTTGTTTAATCTATCTCCCTCT TACCATGTATTTTGATGGAGGAAGTTCATCTTTTTCTTCTTGAGGACCGCATATGTTTTATTTTGTTGTTCTTTTTTGTT AACGAGATTATTCCTTTCCAGTCGTTGATGTTGTGAGGACGGATAGTCATCTTGACTTCTATGAGGATACCAGAAATTTA GCTAGAATGTCGGATATTCTTGCTGTCTATGCATGGGTTGATCCTGCAACGGGGTATTGTCAAGGTTATGTTTTTTCCTG GGAATTTCTTGACTTCTTGCCAATGATTGTGTTCTTTTTAGGAGTCTTGTTATAGTGACTTTGGACACCGAAACTTACAT TCTTTTCACTGAATATTGGATTTTAGGTATGAGCGATTTGCTGTCTCCCTTTGTTGTAATCTTTGAGGATAATGCAGATG CTTTTTGGTGTTTTGAGATGCTTTTAAGGAGAATGGTATTTTCAAATTTGGCTTAGAGTCAACAATGTTATTTTTTTTTG CCGTGACTGACTTGTTTTGTTTCACATGTGCAGAGAGAAAATTTTCAAATGGAAGGCCCAACTAGGGTGATGAAACAGTT GCGAGAATTATGGCATATTCTTGAACTGGCAGACAAAGAAATGTTCGCACACCTGTCAAAAATTGGTGCCGAGAGCCTTC ATTTTGCATTTCGCATGTTGCTTGTTCTGTTCCGGAGAGAGTTATCTTTTAACGAGGCTCTTTCAATGTGGGAGGTTTGT GCACCATGCTTCCAAATCCATCCCACTGATTTTTTTCATGTTTTTAAAATTCAATTAAAATGTAAACCTTTACCTCAATC TTAGAGGAACAACTCTCTTGTCCACTCCTACTTAGGGAGATATGGTTGCTGGTATTACATAGAAGTGAAATATGATATTA GTTCTAAGATGAGTTGCTAGTTGCTACTGGTTCAAAAGCATGCATATCTAATTTTTCTGTTTATTTTTTAGAGTATTTAT TTGCTTTATTGTATTAAGTGAATTGAGATATGGAGACTGGCCTTTCATACCTTCATGTAATTATTGATCGTGTCTTTGGG AACATTTGTGTGATTTTTTATAAGTAAATAACAAGTTAGGGGGTTATATATATATATATATATATATATATATATATATA TATATATGACAAAGCATTGGGCTTATGAATATGCAATAGAAGTAGACCACCTATTGATAAGGTGTATCATAGACTATATA AGAAAGTGAATGATATTGAGCCAGTGCCTTTGTAATAGGAAATCAAGTATTAGTTGACAGCGAGCCTGAATTAATGTCCC AAGGTAACAGCCAGTTAGATAGGCTGTTATATCAGTTAGTTGGTTACACTCCTATAGGAGGAATGTGAGGTTAGTTAGGG AGGTGATTCTGAAGTTGTTCTTTCAGTTGTAGGCAGATTTTCTGACCTCTCGAAAGTCAGAATTGTATACTCAATTTCCA TTATTTTCAATAAGAGAATTTCTCTCTTTTCTTATCTGCTTTCTAGTCCAGTTTTATCAGTATGAAAGTAATATTCTAAA GAAAATTTCAAGAATGTTGCCTGTAATTTAGAGCGGACAGTGTTTTGTGCTATTTATTAATCAACCCTTTTGATAAATCA TTTGCTTAGTTTATCAACACATGAACGTTGTATTCCTGTGTAATGCAGATGATGTGGGCAGCTGACTTTGATGAATCCTT GGCATATGATTTAGAAGTAAATTGTCTGGAAGCGTTGGACATACATCTTCCTAGAGACTCAAGCAATGATTTAAGAGAAG AAGTTGCAGATTCTGATGATGGTAGTGTGAAGAGTGGTTCACAATCAAATCATAATGAAAATGACAATGACAATACAAAA GCCAGCCAACAGTCAAATCATGAGAACACTGATGTCTCTGTATGGGATGCCAAATTGAAGTCGCTATCATCTTATCCCTT TTGTGGCTTGGCAAGGAATATGTGGCCAAGAAATGGTAGAGTTCAAATGAGCACTATGTCCTCGTTAACAAGGAAAGAAA AGGATGAGCTAGCCATATTCTGTGTCGCAGCAATTCTTGTTTTAAACCGTCAGAAAGTCATTCGAGAAACCCACTCCTTT GATGATATGATAAAGGCAAGTGCATTGATCTTTTGTTTTTATCGAGTAATTAATTACTATTATGAAAGTCACAATTGTTA TACTCCTATTACATTGTTTTTGCTTTTTATGTTTATATTGTCTGGTGTTGAGTACCTCCTTGGTCTGGATTATGTTTTGA TCTGGAAATCTGAAGTTGGTACTTGGTAGTGTATAAGCCTTTTTTTCAGAAGTTGTATTCTGCCAAGCACTTTTTATCTT CCTGATGTTTTCCCACAATCACCCCTGTAATAACTGCATATCTTGGTGTTATTGTTTAATGAGGTTTGATGTACTCTTCG TCATAGTAGTCAATAGCGGGAAATAGCGGCGCTATAGCGGCGTAGCGGAGCGGAGCGGCTCCCTGCCGCTATTGAGATGA AATAGCGGCCAACTTCACAATAGCGGTCGTAGCGGCGCGAATAGCGACCAAAATAGCGGCAGATCGCGGCCAATAGCGGG AAATAGCGACGCTATATGAACGAAGGAGAAAATGACTCACGCCCCTTGGTTTTAAATCGTTACGAAACCTTTTTATGGGC ATGTTAGGACTTCTCAGGGCCATTATAGGTCAAAATTGAAAGAATTAAGCTTCATTCTTCATTCAGATTTGCAAATTCGA CTTCTTTACCTTGCTTTTGAGAAGTTATTAGTTGTGTGTTATTGTTCAAGACTTATGATTTTTATTTCTATTATGAATGT TATGAATTTTAGGCAATATTTGACATTGTTTGCTATTTATATGTATATAGTATTAAACTATTAATGATATAAAATTACAT AAAAAAATTCAGAATAGCGGCCACCCCGCTATGCGCTATCACGCGCCGCTATCCGGGATTGACTACTATGCTCTTCGTAG GAAGGTGTAGAAATTTATGCATATTAGAGTTTATAACTTTCTTTTAATAATAACATTAATCCTTTTGTCTCAAGTAGGTT CTTACATTTACCATAATGCTGATGCATGAGCATTGCATTAACTTAAACCTGGGTGTAGTTTTACTATTTGTCTGACTAAA ACCCTATTGTTCATTTTTTTTTCTCTTTGCATGTTCTTTGCTTTTGGTAACATTTAATTTATCTTCTTTTGCCTTCCAGA ATTGTAAGTCCTTCTTTAGTGGTTTTCCTGAATCATTGCTTGAAACCAATTTCAGCATATGCTTAATTTGATCTGTTTTC ACCTTTGTTTTTCCAAATTTAACTTCACTAAGGAGTTCTTTCAATTCTTAATCCAGAAAAGAGAGAAAAGAAATCAACTG ATAGATTATTGTGCGTCTTCTTCTGACTTTAGATTCCAAATTTACATCTTGCAGATGTTCAATGACAAGATGTTGAAGAT CAATGTAAAAAGGTGCATAAGAACTGCAATCAAACTACGAAAGAAATATTTAAACAAGGTAGGTCCTAAATTAGTTATTT TCCTCCAGTTGTCTCTTCCAAAAGAGGGCACTTTGCAAGCTTTTTGCCTATTTTCTTGGTGAATGTTCAATATCCTTGTT TTAGTGTTGGAATGATCAAAGAAGTTGTGTTGGATTACTTCATCTCATTCTGATGAACTACGATACTTGTTTTATTTAAC TTTTGATGTTTCAACATTCATGCAAGAGAAGATTTAGATTTGAATCAGTTGCTTTCTAGTGTTTTCTATACTTATGTCAA TGCATTTTGAATGATCATTTCTCTAAATACATGACTTGCTTTTATTTATATTTCTATGATTTTGGTGGTGAAATTAAAGT CTCATATCTTGACAGGTAATAAAGAAAAAGAACCGGGTTTCAGAGAAAGAAGACTAGTGTAATATCTTTGCCAATTACTC TCGAGGCAGAAGCACCAAATGGCATTGAGTATCACGTATGGCTCTGCTTTTCCAAATCGGACTATGGTGTTAGATTTTTT TTAATTACTTTTCCACTTTGGATGGGAGACTTTCTAAAGTGTTTTTGCTTTTGGAGATTCATCCAGCTGTTGTACCTCCA TAGCCTTCATTTCTCTTTTTTTATGAGGTAAAACTCACTTTGTTCTGCCTTACGGCCTTACCTTGTTTGGTTCCTTAAGT TTTGATGCTTTCACATAGATTCCTAGATGGTCTTTCCCAAAGACATTTTTTGTAGTTTGTTGGTCTCAAAACTCAGTTCC GGTTCTTGGAATTTTGATGCTAGAATTATTCATGGAATAAACTGTGCTGTACAAGCCTACAAGGCTCTAGCACTAAAAGT AATGTGAATAACTATAAGGAGTAAATGAAGAAGCTCATAGGCACATATGTGATTGAAGGCAACATATACGTAATTGAAAT ATGTAATTGATCAGCACCACACAATATCAGTTTAACAATTCACTAGCTTCAGCAGCAGTGCTGTTGGTATTTCAGAAATA ATATCAATTGATTGAAAATAGGAATCTTCTTTAGAAATTTGATTATACTATTTTAGATTATTTTTTTGATGGCTAAAGTG TTGAAATCAACTGACTTGGGATTTAATACTGCATGTCTTATTATTTTTAATTTTCATGCTTAGCTTTTTGTTGTGTAATC CAGGAGTTTACCCTTTGAGGAATGTGTTTGTTTTCCTGAATATCATGTTAAAATATTTACTTCCCTTTTGAGTATTTATT TTTTCCCATTGCTTATGCTGTATTCTCTCTTTTCCTCCTCTTGATGCCAGTGAAAAGATTCACACGGGAACTTTTCATCA CTCTGGTTGCTCCGAGGTCAAATCAATCTGCAGTCTTGGACACTTGGCACAGGTTATGTAAACGTATTTTCTTTCTTTGT ACTTGTGTTTGAGCTTATATTGCTGGAGAAAATTGTACGCTAATCTCTTACTGCTTAGAGGAACTGGAGTTTGGAAAAAG TACACGCACTAGAAGAAAATCAGAAATAGGTGGTGGGTATGGGGGAGGGGAATATTGTAGCATATGGAAACGTATAGACT AAACTAAAGTTAATTTTTGTTGTGATATTAGTTAGCAAAAGAAATGATATATTATGGTTCATACATGCTACAACATTTTT TACTTGAATTGCTGAAACTCTTTTTTGAGGTCGAATTGCTTAAACTTACAACCGACAAAGTAGGGACTGTTCACGTCCTT ATTCATGTATTATTTTTCACCTTCAGAATGCAAACGATTCTGTTTAAACTTGGCATATCTGAAACCACACTAAACATTTA ACATCTCCCACTACTAATGTGGGTTGCCTTTATTTATTTATAAATCGACAATTCTGGCGTATCTGTCCTTGGTTTCCTGT TAAAACTTTGATATTCCCCATGTTGTACATTGAGACAGCAAAAGATTTCTTAAAATCTTGAAGCCCAGCAGCAAATTCCT CGGTGATCTCCTTAGTATCATCACCATTCAGTAATTGTTGATCAATTCCCAGAACAGCTTCATGGTTTAGGATCCTTTTG TAGTATGATTCTGTGAACTTGTAACTTGATCCAGAATCTGGGTTCAGATATACCAGTGGGTCACTTTGCCCCTTCTTTCT TGGCGGACAAAGCTTTCTCATCGTGTCTAGAAAAGCAGCATTCATGCTAGGGTCTGAGCTTCCAGTACCATTGTAATTAT ACAGCCTATCAGTAATGTAGCTACAATGTGTTCTTCCAATTGTGTGTGCTCCTGTTTTGATATGAAACAAACACATTCAT TTAGAAAAAAATAGTAAGTAATAATTTGTACTGCTGGATTTTAGGCCTGTCTTACCCAAGAGTGTTCCCATATCTAGGAC ATTCAAGCCCCTCGATTTGAAGTATGCTAGAGCTTCCTGCCATGAGACGGATGGTGATGGAATGTCTACTGATGCAGCAT CTGATCGCATTCCATCTTTTCTTCCGGTGAAAACTGGATAACCTGGTCCACCTGCCTGTTGACACAAATCCTCAAATTGG TTACAAGATCATATAGAGTTATAGACATACTAGTTTGGTGTGGAAGGAGTTGAAAGTAGGACTAGTTTGTTTCAAGATAT AAGGGTGTGCTGAAAAGTGTACCAGTTGAACAGCATCTCTGGTAGCCAGTTGGAGTATATCAGCACAGGAGACAACGCCA GGGCACTGTCTTTCCACGAAAGTTTTTATATTGTCAATCAGTACAAATGCTCCAAGCCCCCGGTTTTGCGGTGCTTTTTT CTCTGTATTTGGTCCTTCGTCCAGCAGAATTGATGCGTCACAGCCCTAGCCACAGAATATTGGTGATTTAGGTTTTGAAG TGGAAAAAAGAACTTGAGCATTTGCAACATGCTGAAAGCTAAGTGCATATGGAAAACCCTTCTATAGTTGATTATGATGT TAGAATAAATTCTGGGGAGAAACTTAGATGAGTAGTTTATGGATTTTAAAATTGATTCTGATAAAAGAGAAGCTAATTCA AATATACTGTAAGTAAATTAGATTGAACAGCAATAGTTGGTTTTTGGCTGCATGTTTCTGGGTGCAACATGGATATATTT CAAGGGTGTTGTCAAGGGTGTGGGCTACTTTATGCAATCTCTTATTTATAACCTACCTTCTGTCTCAATTGTTAATTTCC TTTTGTTTGCTGAAAAAGTTGAAAAGAGGGGAGAGATGAAAAATAAGAGTAAAGGGTAAGACAAATAAGGTACTTACTGT GATGAAACAATCTGAATATACCAAGCGGAGGAGCTTTGCTGTGATGCTTTTGTCAAATTTCCAAAACAGCTTTACTTGGT TCCTCACATACAACTCAGCATCGCGGCATATGTTGTGGGTCTTATAGTAATGCCACTCCAACTTTGGCCGTGGAGGTGTA GCCGCCGCCACAGGACTCGAGCTCAGCGCTGCAAAAGCAACAACTAGTAGGAAAGCCACACACATACTTGACCTCATTTT GGGTCACTACTCACTACCAAGTCTCTCTTGCTATTTTGTATAACACTAAGCTCGATTCTTAGATGTAGCCACTGCCTTGC TGCTTATATAGCGTACACTGTCCTAGTGGCATAACCGACCAAGTCATATAGAATAGAAAAATAGAGAAATATAACTCATA GAATAATGGGTTGTGTGCTCTAATTTTCCATCTACCTAGTCCAAGCATCACGGCACCGTGTGATGAAATATTAAGGCATG TAGCTGTTCACATGCACCAAGGAGTTCTGAGCATACTTCTGAAGCCATATTGATGCTACGACGTGGGTAGCAAGCAATGT GCATTCCATGTGACTTCAACTTGGATTTGGGGCCTCATTCTCTAATCACGAGATTTATTCTTTTTATGTTGCAGTGTTTC CTATAAATCGAGGAAATTATGGCTTTTAAACCATATGTGATTAACTTATTATTGATTAATTTATGGTATGGCATGTGCCA TCTGGGTCTCACTTGATGGCTGGCCTGGATGGATACTGTTCAATTCTTTCCTTTTTGTTTGAGTCTGCCCAAACGGCCAC TCAGTCCATCATCATTCTGGTTGGCCTAAAAAACTCCCAACGAAGGGAACGTCAAACTGGTTAACTAGTACCACCAAAGC AAAACCTTCACTTCTCAAGCCAACTAGCTGAACAAAGACTAAG
CDS sequence (LotjaGi3g1v0030400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATTGTGGTGGCGAGGAAGAGAAGCAATGGAGTTGTGGAAAAGCTGGGAGTGTGAATTTCCGAAAAGTGAGTTCGAT TGTTCGCGACATTGGGGATCCTTGCCTCTCTCAGTCTCCTGTAAAGGTGAACAGAATGCTTAAGCCAGACAAGTGGCAAG CCTTGTCTGATAGTGAAGGAAAGGTGCTTGGTTTCCGGAAGGCGCTGAAATTGATTGTGTTAGGGGGTGTAGATCCTTCA ATAAGACCTGAAGTTTGGGAGTTTTTACTAGGTTGCTACGCACTGAGCAGCACTGCTGAGTATCGAAGAAGGTTGAGAGC AGCTAGGAGGGAGCATTATAGTGACCTGGTTAAGCAATGTCAAACAATGCATTCAAGTGTAGGAACTGGTTCGTTGGCAT ATGTTGTTGGATCCAAAGTTATGGATATGAGAACTTCATCTAAACTTGAACGGGAAATGAAAGAGGCAGCAAAAGAAGGC CATCATGAAAGCTCCAATGGTTCGGTTGACCTAGCCAGTTTGAGAGCAAGCACAGATGGTGCAACTTATGATTCTTATGG TCAACAAAACTGCAGTTCCCCAAATTTAGGGAGAGAAACAGATGGATCACATTGTGTGATTGATAGTCCTTTTGATTTTC CTGCTTTACCTGTGACCAATCTGTTTGAAAAGAGTGGTAAAGATAACAACTCAAGCACAGAGCATGGCAGTAAACTGTCT GCACGACATAGATTAAGATTTGATGATGAAATGCATACCTTTCAAATCAATGACAATGTAGACTTAATTGGTGAATCAAA TGGCCAACAACCACGGGGTATCTTGCATTCCACGAACTCTGAAATTGAAGTTGCTTCACCTGATGAGGATGAACCAGAAT TCCCATCGGACAATGCTGTTTATGAAGCTCAGATGGTAAATCAACTAAAAATATCAGATGTACCCCAGCCAGCAAGGATA AGTGCCGCAATGTCTCAAGAATGGCCTGTCGGTGAAGATAGAGTATCAGAATGGCTTTGGACCTTGCACAGGATAGTCGT TGATGTTGTGAGGACGGATAGTCATCTTGACTTCTATGAGGATACCAGAAATTTAGCTAGAATGTCGGATATTCTTGCTG TCTATGCATGGGTTGATCCTGCAACGGGGTATTGTCAAGGTATGAGCGATTTGCTGTCTCCCTTTGTTGTAATCTTTGAG GATAATGCAGATGCTTTTTGGTGTTTTGAGATGCTTTTAAGGAGAATGAGAGAAAATTTTCAAATGGAAGGCCCAACTAG GGTGATGAAACAGTTGCGAGAATTATGGCATATTCTTGAACTGGCAGACAAAGAAATGTTCGCACACCTGTCAAAAATTG GTGCCGAGAGCCTTCATTTTGCATTTCGCATGTTGCTTGTTCTGTTCCGGAGAGAGTTATCTTTTAACGAGGCTCTTTCA ATGTGGGAGATGATGTGGGCAGCTGACTTTGATGAATCCTTGGCATATGATTTAGAAGTAAATTGTCTGGAAGCGTTGGA CATACATCTTCCTAGAGACTCAAGCAATGATTTAAGAGAAGAAGTTGCAGATTCTGATGATGGTAGTGTGAAGAGTGGTT CACAATCAAATCATAATGAAAATGACAATGACAATACAAAAGCCAGCCAACAGTCAAATCATGAGAACACTGATGTCTCT GTATGGGATGCCAAATTGAAGTCGCTATCATCTTATCCCTTTTGTGGCTTGGCAAGGAATATGTGGCCAAGAAATGGTAG AGTTCAAATGAGCACTATGTCCTCGTTAACAAGGAAAGAAAAGGATGAGCTAGCCATATTCTGTGTCGCAGCAATTCTTG TTTTAAACCGTCAGAAAGTCATTCGAGAAACCCACTCCTTTGATGATATGATAAAGATGTTCAATGACAAGATGTTGAAG ATCAATGTAAAAAGGTGCATAAGAACTGCAATCAAACTACGAAAGAAATATTTAAACAAGGTAATAAAGAAAAAGAACCG GGTTTCAGAGAAAGAAGACTAG
Protein sequence (LotjaGi3g1v0030400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNCGGEEEKQWSCGKAGSVNFRKVSSIVRDIGDPCLSQSPVKVNRMLKPDKWQALSDSEGKVLGFRKALKLIVLGGVDPS IRPEVWEFLLGCYALSSTAEYRRRLRAARREHYSDLVKQCQTMHSSVGTGSLAYVVGSKVMDMRTSSKLEREMKEAAKEG HHESSNGSVDLASLRASTDGATYDSYGQQNCSSPNLGRETDGSHCVIDSPFDFPALPVTNLFEKSGKDNNSSTEHGSKLS ARHRLRFDDEMHTFQINDNVDLIGESNGQQPRGILHSTNSEIEVASPDEDEPEFPSDNAVYEAQMVNQLKISDVPQPARI SAAMSQEWPVGEDRVSEWLWTLHRIVVDVVRTDSHLDFYEDTRNLARMSDILAVYAWVDPATGYCQGMSDLLSPFVVIFE DNADAFWCFEMLLRRMRENFQMEGPTRVMKQLRELWHILELADKEMFAHLSKIGAESLHFAFRMLLVLFRRELSFNEALS MWEMMWAADFDESLAYDLEVNCLEALDIHLPRDSSNDLREEVADSDDGSVKSGSQSNHNENDNDNTKASQQSNHENTDVS VWDAKLKSLSSYPFCGLARNMWPRNGRVQMSTMSSLTRKEKDELAIFCVAAILVLNRQKVIRETHSFDDMIKMFNDKMLK INVKRCIRTAIKLRKKYLNKVIKKKNRVSEKED
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 19 | 662 | 644 | 9.2E-205 | – | |
PANTHER | 19 | 662 | 644 | 9.2E-205 | – | |
SUPERFAMILY | 52 | 449 | 398 | 3.4E-42 | ||
SMART | 73 | 514 | 442 | 1.0E-25 | ||
ProSiteProfiles | 76 | 489 | 414 | 31.403 | ||
Gene3D | 311 | 414 | 104 | 1.4E-11 | – | |
Pfam | 341 | 487 | 147 | 9.4E-32 | ||
SUPERFAMILY | 426 | 657 | 232 | 2.88E-26 | ||
MobiDBLite | 517 | 555 | 39 | - | – | |
MobiDBLite | 528 | 555 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0030400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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