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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0053700 |
| Transcript ID | LotjaGi3g1v0053700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bifunctional protein FolD; TAIR: AT2G38660.1 Amino acid dehydrogenase family protein; Swiss-Prot: sp|A2RVV7|FOLD1_ARATH Bifunctional protein FolD 1, mitochondrial; TrEMBL-Plants: tr|G7I8G5|G7I8G5_MEDTR Methylenetetrahydrofolate dehydrogenase; Found in the gene: LotjaGi3g1v0053700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5593943..5597605) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTTTGTTGGCAGTCACATGGCCGAAGTGTCTAAAAAAGCATCTTCCACTAAAATTAAGGTTTCTTCATACCTTAAA AGACCATCATTTTGACCAAATTTTAATGTCGCCTGCTCTTGCATCTCTGGACTTGCCTGACATTTGGACTCCTAATTCTT CTTGTCAGAGTATTCCAGCATTACATAAAAGCTGTGAGCTTCTTTTCCCTTTGTTTGATTATGCTTTTATTGCTATTTGA TTGGTTCCTAAATTATATCTTTAGATGTTATATAAGGTTAATTCTATTTGTTAGTCGTTTAGATTTTTACTTATTTGAGC AAAGACTGGTACTGTTAGCCATGTTCATCTCATGACTTTGTTCTTTTCTTCTGTTCCTATTTTGCTAACAGAATCTTCAA TCACTCTTTGGTCATGTTACTTTTGTTCATAACTTCATATACATCCATAGAATCACCACAAATTTGATTGTTGTAGTGTT AAAACTTAGAAGTATTTTTCTTGGTTATGCTTCTCACGAGAAGGGGTTTGAATGTAGCCATTCAAGTCATGGTTACTGTA TGTCCATCATGAAAGAGTGTTTTTTTGTACTCATACTCAGCTTTAGGGGGGGGGGGGGGAGCAGTATTCTGGAGTCTGAG TCTTTTCTACCGAAAGCAGTATACCCTGTTCCTTCTGATATGTTATCTAATATATAGGAATTAGCACCTTCTACTACTAC CTCACCTGAAACTGCCAAGACTAAGGCTAGCTCACCAAAATTGGTATACCAAAAGATATAAAAACTGGAACTCGGCATAT ATGAAGTATATGTTCCCACTTTAGGGGGAATACTGGGTTTATTAGGCACATATGTAAATAAATAGTTCACTTGCAGTTGC ATGCCTGTATTGACTAGCCACTAACTATTAGGCTGTATGTTAGCTTGTCATTAGTATCTATTAGCTGCTTGATTACTCCC TTGATTGATCACAATCAACTTACGAATAAGAGATTAACTAGGTAGCACTCCAATTTCATTTAAACTCTTCTGCTTTACCT ATGAATAGAATGTTCAAATTTTGCATTCTTTTCTTTTTCTAATATGTATTCTTTATTAGCTTCTTCTTTCCATCTTATTC CTTAAGATACTATATTCAAAATAATGTTCACTACAGTTAATCAGCAGACGGCTGAGGTGCTTGATGGAAAATCGATATCA GCGGAAATCAGATCAAAAATAGCTGATGAGGTAAGACACATGAAGAAACACCTAGGAAAAGTTCCTGGATTAGCTGTAAT TTTGGTGGGCGAGAGAAGGGATTCTCAAATTTATGTTCGCAACAAGATAATGGCATGTGAGGAAGTTGGAATCAAGTCTT CGGTGACTGAATTACCTGCTGATTGTGCAGAAACAGATGTTCAAAATGCTGTCATGAGATTTAACAAGGATCCTTCAATT CATGGTATTCTTGTGCAACTTCCTCTACCACAAGTAATTTCTGAATCCTTACTTTTTCAATAACTTGATGGATTTTAAGA TATGTTGCGGTATTATTCAAGAAAAGGGGGCCAATCACAGACTTCTCAGAGCTTTTTCAGAAATGGTCAACTAGTGAAGT AATCTTTTTCAACGAGAGACCTAGGATTAAAATCACCTTAGGAAACCCTCTGTGTAACTTATGATTTATCACATGAACCA TGAAAGAAAGTTAAAAGCATGATCTATGGTCTTCTGTACTGAAACAACCTTCATTGAAATCTCTTAAAATTGGTTTTTTT TTCTTTCTTGGGGGTAGAATATCTAGAAAATTATCTCATGATATGTAAACTTCATTGTATTAGAATTTCTTCGATAGTTA CGTAAGAGCAGTTTCTAGATTTCATTATATTTCCTGACCTGTTTCCTTATTTATGTGTTTCAGAACTTCCTTTGATAGTT TTTTTTTTCTTTTTGATTTGATTATATTGCACCTCCAACAAAGCAATGTCCTATTTTTATCTTGATTTGTTTTCTTTTTG TCTTTATTAAACTTGTTTTTAAATTACTTTTCTCTTCCTTTTACTGATTATTTGTCTTTGGTTTGGTTTAATTTGTTGCT TGATTCGATTTCTGTGTCTCACATGGCATGCTCTGTATTCTCTGTAGTCTATAATGATTACCCATACAACATTTTCCACT CACTTCTATTCACAACATTTTCCAGTGGTTTCCCCCCTCACAAAACAATACCTACATACCCAAGAATCTTTAAACAGCGA CAAAAGATCCCCTACTTGAACCAGCTAAACTAAGTTGTATGACAAGCAATTAAACATCCTACTGCTGTGTATCTTTGAAG ACAGAGTTTGATGCAACTTCCAAAGAAGGATAATGTGGAATAAACAAGTATTGATAGCATAACTAATTGATGCAGAGAGA ATAGGACCTAAATAATTTTATTTAATCTAAAATTTGTTGTTTGGGGTAATCATTTGCAGGTACTACTACAATATTCTTTT GTCATTTTTTTTTTCTGGATAACTAGTTTGCTTGTCAGCTGTACATTCATATCTAATAATAAAAAAACAAAGATTATCAC ACATGTTACTGTGATTGATTTACTGCAAAACGTCTGGGACAGCATCTAAATGAGGAAAAAGTTTTGGATGCTCTAAGCCT AGAAAAAGATGTAGATGGTTTTCATCCTCTGAATATGGGGAATCTTGCCATAAGAGGAAGGGAGCCACTGTTTATTCCCT GCACTCCAAAGGGTTGCATTGAGTTATTGATCAGATCTGGAGTTAAGATTATGGGGAAGAAAGCCGTGGTGATTGGGAGA AGTAATATTGTTGGATTGCCAGCATCCTTGCTATTGCAGGTAAACATGTGTTTCAGTTTAAAAAGGGATTAGGATCCTCT TATGTCACATGACAATATCTAGTGAAACATTGTGGCTATCTCTCTCTATAAATATTGGGAGGGTCTCGCTTATTTAATAC ATGTGAAGAGAGACATAGACACTAAATTTCAGCATGATAATGTCATGTGAAGTTTTCATGAGAGGATTCTAATCCGTTTA AAAAGCATAGCTTCTCGACATTTTTATCTTCTACCTGAAGGTTTAACATAGTTTTTAATGTTGGCAGAGACACCATGCAA CAGTCACGGTTGTGCATGCATTTACAGAAAACCCTGAACAGATAACATCAAAAGCGGATATTGTAGTTTCAGCTGCTGGG GTGCCCAATTTGGTCCGTGGGAACTGGATAAAGAATGGTGCAACTGTGATTGATGTTGGAACAATTCCTGTTGAGGTGAG TTGCAAGTTGCCAACTTGAGATAACTTTTATAGCATGTTTCGATCAGCATCTATTTCCTCGTAATCAATTCTGATACCTG GAAGCTACTCGCGAAAGCTTTTTCCTGAAATTGATTGTCTTTAGAATCATTTGTAGAAGAAATTTCAATGATGCACTTAA TATTTTGGTTGTTGCATATCAATTAACCAAGTATGAGGACAAAATGTGGCAGGACCCTAGCTGCGAGGATGGGTATCGTC TAGTAGGTGATGTATGCTTTGAAGAAGCTGTAAAGGTGGCATCCCTTGTTACTCCTGTGCCGGGTGGGGTTGGACCTATG ACGGTTGCTATGCTGCTATTGAACACGCTAACTTCTGCAAAGCGCATGCTTAATTTTACTTGA
CDS sequence (LotjaGi3g1v0053700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTTGTTGGCAGTCACATGGCCGAAGTGTCTAAAAAAGCATCTTCCACTAAAATTAAGGTTTCTTCATACCTTAAA AGACCATCATTTTGACCAAATTTTAATGTCGCCTGCTCTTGCATCTCTGGACTTGCCTGACATTTGGACTCCTAATTCTT CTTGTCAGAGTATTCCAGCATTACATAAAAGCTTTAATCAGCAGACGGCTGAGGTGCTTGATGGAAAATCGATATCAGCG GAAATCAGATCAAAAATAGCTGATGAGGTAAGACACATGAAGAAACACCTAGGAAAAGTTCCTGGATTAGCTGTAATTTT GGTGGGCGAGAGAAGGGATTCTCAAATTTATGTTCGCAACAAGATAATGGCATGTGAGGAAGTTGGAATCAAGTCTTCGG TGACTGAATTACCTGCTGATTGTGCAGAAACAGATGTTCAAAATGCTGTCATGAGATTTAACAAGGATCCTTCAATTCAT GGTATTCTTGTGCAACTTCCTCTACCACAACATCTAAATGAGGAAAAAGTTTTGGATGCTCTAAGCCTAGAAAAAGATGT AGATGGTTTTCATCCTCTGAATATGGGGAATCTTGCCATAAGAGGAAGGGAGCCACTGTTTATTCCCTGCACTCCAAAGG GTTGCATTGAGTTATTGATCAGATCTGGAGTTAAGATTATGGGGAAGAAAGCCGTGGTGATTGGGAGAAGTAATATTGTT GGATTGCCAGCATCCTTGCTATTGCAGAGACACCATGCAACAGTCACGGTTGTGCATGCATTTACAGAAAACCCTGAACA GATAACATCAAAAGCGGATATTGTAGTTTCAGCTGCTGGGGTGCCCAATTTGGTCCGTGGGAACTGGATAAAGAATGGTG CAACTGTGATTGATGTTGGAACAATTCCTGTTGAGGACCCTAGCTGCGAGGATGGGTATCGTCTAGTAGGTGATGTATGC TTTGAAGAAGCTGTAAAGGTGGCATCCCTTGTTACTCCTGTGCCGGGTGGGGTTGGACCTATGACGGTTGCTATGCTGCT ATTGAACACGCTAACTTCTGCAAAGCGCATGCTTAATTTTACTTGA
Protein sequence (LotjaGi3g1v0053700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLLAVTWPKCLKKHLPLKLRFLHTLKDHHFDQILMSPALASLDLPDIWTPNSSCQSIPALHKSFNQQTAEVLDGKSISA EIRSKIADEVRHMKKHLGKVPGLAVILVGERRDSQIYVRNKIMACEEVGIKSSVTELPADCAETDVQNAVMRFNKDPSIH GILVQLPLPQHLNEEKVLDALSLEKDVDGFHPLNMGNLAIRGREPLFIPCTPKGCIELLIRSGVKIMGKKAVVIGRSNIV GLPASLLLQRHHATVTVVHAFTENPEQITSKADIVVSAAGVPNLVRGNWIKNGATVIDVGTIPVEDPSCEDGYRLVGDVC FEEAVKVASLVTPVPGGVGPMTVAMLLLNTLTSAKRMLNFT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 56 | 360 | 305 | 4.5E-152 | – | |
| PANTHER | 56 | 360 | 305 | 4.5E-152 | ||
| SUPERFAMILY | 70 | 189 | 120 | 5.18E-38 | – | |
| Hamap | 70 | 358 | 289 | 35.707 | ||
| Pfam | 72 | 188 | 117 | 5.6E-38 | ||
| Gene3D | 73 | 334 | 262 | 5.6E-105 | – | |
| Gene3D | 75 | 351 | 277 | 5.6E-105 | – | |
| PRINTS | 101 | 123 | 23 | 2.2E-77 | ||
| PRINTS | 142 | 169 | 28 | 2.2E-77 | ||
| PRINTS | 177 | 198 | 22 | 2.2E-77 | ||
| CDD | 184 | 355 | 172 | 1.02005E-88 | ||
| SUPERFAMILY | 190 | 355 | 166 | 3.45E-49 | ||
| Pfam | 191 | 356 | 166 | 1.5E-62 | ||
| PRINTS | 224 | 244 | 21 | 2.2E-77 | ||
| PRINTS | 273 | 302 | 30 | 2.2E-77 | ||
| PRINTS | 314 | 330 | 17 | 2.2E-77 | ||
| PRINTS | 331 | 349 | 19 | 2.2E-77 | ||
| ProSitePatterns | 335 | 343 | 9 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Methylenetetrahydrofolate dehydrogenase (NADP+) activity | Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NADP(+) = 5,10-methenyltetrahydrofolate + NADPH. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0053700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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