Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0061400 |
| Transcript ID | LotjaGi3g1v0061400.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carotenoid cleavage dioxygenase; TAIR: AT3G63520.1 carotenoid cleavage dioxygenase 1; Swiss-Prot: sp|Q8LP17|CCD1_PEA Carotenoid 9,10(9',10')-cleavage dioxygenase 1; TrEMBL-Plants: tr|B5BLW2|B5BLW2_MEDTR Carotenoid cleavage dioxygenase; Found in the gene: LotjaGi3g1v0061400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:6495655..6503012) extracted from Lotus japonicus Gifu genome v1.2.
GCGAGCAATACAACGTGAGGAAAGACAAAGACAGTATCTTTCGACACGCAGTAGAATCTGAAACATTGTGGAAAACATCG TGGCAGTTTCTATGCCAAGGAATCTATGGTCGAAATTAAACCACATGCTCAATCGTGAATAATTTCCACTCCCCACAACC TCAATTACGTAAACCTCAAAGCTTTCCACCACTTTCAGTCACTGACACCACCAACCCACAATGGAGGATGAGAAGAAGAA CACCACTGGTACTGGTGCTGGAGGGTTGCCAGTGAAGGTGGAACCAAAACCCAGTAATGGTTTCACTTCAAAAGTGATTG ATTTGTTGGAGAAGCTGGTTGTGAAATGCTTTTATGATTCTTCACTGCCCCATCATTGGCTTGCTGGTAATTTTGCTCCG GTTCATGATGAGACTCCTCCTACTAAGAATCTTCCTGTCAGAGGGTTCCTACCGGTTGGTACCATTGCCTGTTAGATACC CATTTTAGGATATCTGATAATGTGTTATATTTCTCAATTGGAATATTTTGCTGTAACATACCTTGTTATTAGACCCCTTG TTCATCACTTACTATTTGAAGTGTATTGTAGGATTGCTTCAATGGAGAGTTTGTCAGGGTGGGACCTAATCCGAAGTTTG CTCCTGTGGCTGGATATCACTGGTAAAAAATGATTCTTTTGTTGCTAAAAAATATTTGGTGGAAAATATATCTTAGTGAT CCATATTACTTATCAGATTATTGGTTTTCTTTTGTCATATTAACACTTTTATGTGAAGGTTTGGTATTAACATGGAGCAG TTTTTGTTTATCTGAATTAAAAAAAAATGTGTTCTTAGTATGGAGTTTTATGCTTATGCCGTGCTTTCCCTATCTGTTTT TGCAGGTTTGATGGAGATGGGTGTGTGATTCTCTTCCATTCTTTAAAAATATATTTCTTTCATATTTCCTGCATTGTGCA TCTTGACTATCCATTTTTTTTGACATGTGTAATATGTGAGCACAAGTCTAACATAATGATAATGGCTTAGTGATCACAGT TTAATACATAAGTTTGAGCCCCTGTTCTGTTGGAACTGCACAGCCAGATCATATCATATAGGATGTAAATATTTGTTTTC TTTTGAATACCTTTTGAGGTTTCCCCATTCCTTTTTCCTTGCCTCTTCGCCTAATAGCCTAAGCTTTTGAGAGAGTTGGT TCATGATAATATGGTATCAAATCTTATACGACAAAGTGATTTTCAGTTCTTTCCACTTATGTTCTTCTAATAAAAAGGTA AATTTCAGCACAAGATTTGTGGGCTACAGGCCTAGTACATTTTTCAAGCTTTAAACCCTCAAGCCTCTTCTGTGAGGGGT GTGTTGAGGATGTATCATTAAAAACCATCCATGTGTCTTTATCAAATAGCTTAAGCTTTTAAGAGAGTTAGTTCATGACA AAGTGCTAGCAACACTCACTTTAACACTCTTTCCAACAATGTGTCATTGATTGGTTGAAATTCATGTGGAGTCTACTAAA AATATGGATCCCACTTTCAATTTAGTGGGACTCATAGAAAATTAAGTGTGCCCACACTCAAGTTAACCAACCACTACTTA TTATATCTGTATTATGTTTTGAAATCGTAGTTCAGTAGAGCGCATGTTTTGAAATGATTTTGAGTTTAACATTTCAAATC CTCAAACTGATTATGCCTAATCTTTTCTCGTCTGAATTTTATATATGCATGATTATGACATTGTTAAATTTAGTTTAACT TACTAATGATATATCCTTCAGAAGTTTCTCAGGGCTTGTTATATTAATTAATAGGTTAGTGCTGGGTGATAGGGGAGGAT CACATGAAAGTATCAAGGAGGATTGGAAAATTAGCATTAGAGACAACTGTGTAACCTCCTGCCCATGTGGCAGGATGAGA GGGAAATCATGAAGGGGATCAGTTAAGTGGATAAGAGCGGAAATGGAGGAATAAAAAGAAGGAAGAGATAGAAGAGAGAA TCAGGAAAGAAGTGAGTTAGGAAGGTGGGAGAGAACCTGGCATTTCGAATAACCTGGGCTGTTCGTATTATTTTGTTGAA AGAGAATTCATCTCAGTTAATGTACACATCTATCTCTGCTTTTAATATCAAGCTGAGAGCAGTGGTTGATTTATAGTAAA TAATGTGTTTTTGGTCATTCTGCTCTAATTCGGTTTCAATCCTTATATTTTTACTCCATGTCTGTTGTAGTACTTATTTT TTCAATTTGTTCATTCTAATCTCTCACTGTACTTAATGTATCCTATTTGTCCTTATGTTAAGTAATCCTTCATTCAAGTT ATGTTAATAAATGATATAAAATGGTTTTTTAAAGTAGTAGTTTAGATAGGAATAGGAAAGAATTTTGTATGCAACACGTT GTTCACTTAATATATAGTGAAAATATAGGTCTAAAATCTTAATAAAGCCTACATAATATGGTATTTCTGATAAAGAGTCT GCTGTACAGATGCCGGTTCACTTTAATTTTTTTCCTGAATTATACACCAGTTCCAATTATGCTTCACTAACACTTTTGAA TTTCAGCAGCTCATCATAGTGGAAATAATAATGTTCTTAAATTTTGGGTGGTCAATAACATTCATAAAAAGTTCATAGTT TTGTTGTCTGGTCCTCTAATATGGTTAATTGCAGAATGATTCATGGTTTGCGAATCAAAGATGGAAAAGCCTCATATGTT TCTCGTTTTGTGAGAACTTCTCGTCTTAAACAAGAAGAATACTTTGGAGGCTCTAAATTTATGAAGGTAGGAACAGAAAG TGAAAATATATAAGCTTAGTGAAGAATTTATTACTCTTAGAACTTTTAGGTTCCCAAGACAAGTGTAACTTCTTGGATCT CATTTTCAGATTGGAGATCTCAAGGGTCTATTTGGACTGCTAATGGTTAACATGCAAATGTTGAGAACTAAATTGAAAGT ACTGGATGGTTCATATGGACATGGAACAGGTAACTCATGTTAACTCGTTTTGGTGAAGTCTTCGTGTGGTTATTTACTGG GACTATTATGCTATTGTATGTGACTGGAATAGCTGAAACTAACTTCTGCTCATACTCTCATGTCTATCAGCTAATACAGC TCTTGTTTATCACCATGGGAAGCTTCTAGCACTCTCGGAAGGAGATAAACCTTGTGAGTATTGTTCCTATTTCACTTTTA TGAAAGATGTAAACTTGTTGATTATATCTGAATGCCATAAACTGAATAGAACAAAGGGGTTAAAATAGATTCATATGGTT CAGGGGTGTCCGTCAGCCATTATGATCTTGAGCATCAGTGGTTTTTTCATTTCTCATTTTGAAGTAGTCTCATTTTGAAT TTTGCAGATGCTATTAAAGTTTTTGAAGATGGTGATTTGCAGACACTTGGCCTGCTAGATTATGACAAGAGATTGGACCA TTCCTTCACTGCTCATCCAAAAGTTGACCCATTTTCTGGTGAAGCCATCTTCAATAAATAGTGAAAAGTTGACTTATTTA ATGTAATTATTTATTCCAACAAACAAATATCCTGTATGCAGGGGAGATGTTTACATTTGGTTATTCACATACACCGCCAT ATGTCACATACAGAGTAATTTCAAAGGATGGTTTTATGCATGACCCTGTACCTATAACAGTATCAGACCCCATCATGATG CATGATTTTGCCATCACAGAGAACTACGCCATCTTTATGGATCTTCCTCTGTACTTTAGACCAAAGGTATTGCAGGTGTT TCTGTTAATGTAATCTTACAAAAGAGTAATTTCTTTATCATATCATTCAACTATACCAAGCTTGGTGTTAAAATGATCTT GTTTATTATGAGTAAAAATAATGCTTTGCTTTTATACTTGTTAGAAGTTAAAAACAAAATCCTAATCCTGTCCTGCACCT AATAGTTCAATTTTTTGGATATTCTTAATATCATATCAGAGCCACCGTACCCTAACCAAGTGAATAGAATATCAATATTC TTCCCAATTCATAATTAAATGTGGCTCTATATTTTTTAAGGTTTTTAAGGGGGGGACATTTTATAGATAAACGCCAAGTC TGGGTTTGGATTTACTAGCTTCAGGTTTTGAGATTGTAGGTTCTTGATGCTACTTTCTTCCTTGTAGTGAAATATTTTTA AATGAAATGTTCATAATGTGAATTGTTACAGTGAATGTGGGCATGGACAATATGATTTCATTTTCAAATGGGATAGGGTT AATTTAAGGATGGTTTAATGGTATACAGTCCGTTGACTTCATGCATCAGTTGATGGGAACTAATGATCTAAGTTGTTGAA TGAAATCCATATTTCAGGAAATGGTGAAAAATAAAACACTGATATTCTCCTTTGATTCAACCAAGAAAGCTCGCTTTGGT GTCCTACCTCGGTATGCTAAGGATGATAAGCAAATTAGATGGTTTGAGCTACCAAACTGCTTCATATTCCACAATGGTGT GTTTGTTTGCTATTTTTTTCTCCTTCATAAATTGTTTATTAATATTCTGCAATGATCTCGTAAAGATTCTGTGATTCATA AAATTGAAGTGCATGATAACATAATTTGAGTGCAGTCCAGTATATTTACCCAGCCAACTTATAAAAATAGTCTTTCTTTT TATAAATCATAGTAATGCCAAAGTTAGATAGGAACAATGTATTACGGATAAAAGTAAGAACACAGATTCAAGCTTCAATC TGTGCCTTAAGCTCTTCAAACAGAAATGTCCATTGAAACTTTTATATGACCTTTTTTCTTCTGTTTTTCATTTAGCCAAT GCTTGGGAGGAGGAGGATGAAGTTGTTTTGATCACATGTCGCCTTGAGAATCCAGAGTTGGACAATGTTGGCGGGGCTGT CAAGGAAAAGCTCGAAAGTTTCTCAAATGAGCTGTAAACCGATTCATTCTAATATGTAAATTACGAAGCAAATTTTACTA GATGGTCGTTATTTATTTATGGATATTGAACTTTTTACAGGTATGAAATGAGGTTTAACATGAAAACGGGTGAAGCTTCT CAACAGAAACTATCAGCATCTACAGTAGATTTTCCTAGGGTGAATGAAAGCTACACTGGCAGGTAAGTTTATTCTCTCCA TGCTGAGAAAATTCAGGGTAGTTTGAAAATGAAACCCGTAAATCATCCTATCTTAATCATATGTAAATTCGATAGTTGTT ATTTTCGTAGTCGCATTAATTTTTTTGTGTACTTATTTGAAAATGAATGACAGTTCTAGTGTGTGTGCTTTCCAAATTAA GTTTAAGATTGAGTCCGAACAGTAGTTAAGTTTATGCTTGTTTTCCATATCCTGCATTTACCATTCGTATTTCATCAGGA AACAGCGATATGTATATGGAACTATATTAGACAGCATTGCAAAAGTTACCGGGGTTGTTAAATTTGATTTGCATGCCAAA CCGGATTCTGGAAAAACAAAGCTTGAAGTTGGAGGAAATGTTCAGGGTCTCTATGACTTGGGACCAGGGAAGTTTGGATC TGAGGCTGTTTATGTCCCACGTGTCCCTGGCACCGATTCTGAAGAAGATGATGGATACTTGATCCTATTTGCACATGATG AGAATACCGGGTATCATTTTCCTCTGCACTTTTCATGCAGTGGCTTTTGCGAAATTGTTTATATACGCATGGATTATAAT CATAATTATGACTGTTATGAACTTATGAGTTATGATCAGTGTAATTCCTTAGGAATCAGAAACAGCTGTGTATGGAATAT GGATCACTATGACATGACCTATTTTTAGTTTTTTTATCTCCTTTTTAATAGTATAAAATCTAACATGATTCTAAATAATA AAACTGCAGCAAATCATTCGTGCATGTCATCGATGCAAAAACAATGTCAGCAGATCCTATTGCAGTTGTAGAATTGCCGC ATAGAGTTCCATATGGTTTCCACGCCTTCTTTGTGACAGAGGTTTGTGTGACTTCATATTGATTATTTCTACATTGAATT TCATTATCTCACTCACATTACTCGGAATGTTTACTTTGTAACTGCTTTTGGGGGTATGAGTACATTTGACTTGAGTGCCT AAGTTTCATCTAGTATGAACTAATTTATAGAAAGATAAAACTAAATATAGCTCTAAGTTATTAACTTAGCACAGTTTATC ATCCTTGTTTATATTTAGTTTTTTTATGTTACTTATCAAAGAAGTTCTAAGCAATTGCTCATATAGCAGGGAAAATTGAA TGGCCCAAAGGTGTTGGTGACTTGACTGATTTAATATTCTCTATTACCATAATCCCAGAAATGAAACATGAAGGCAAATC TGCACATTGTCTGAAAAAACATAAAATAAAGAAATACTATGCTTTCATTTTATCTTTGACGCCTCACTTTTCCTTACAAA AGGAGAACTGAGTATAGTTCAAGGAATATGATTCATAGAGATTCGCATAATGCAAACACCCAACTGAACGCTTAAAGTGA GAAAGGAAGAGAAGAAATAGAAGTAATTGATGTGATATATGATGGGTCATAGATGTGATAAAGAGAGAGATTGAGAGAAA AATGATGCGTCTATGGGGTGTCTAAACTGTTTGGGTGTGTAAGTATCATTACGATAGTTGAATCAACCCTATATCAAACA ATGCAGAGATATGGGGGTTTGTGTATGTATAAGAATTCAGTTGTTTCTCATTAATTGGTTTCCTATTTCTGTTTTAATTT TTAAAAGACCACCACCAGTTGCTTAACACTACCCGTCTCCAAGGATAGCTCAAGTAGTAAAGAGTTAGGGACATAAGGGT TGGGTGGGATGAAGGGTGAAGGGTCCAGAGTTCGAACCTTGAGGAGGACTAATTTACTAACATTACTAACAACTAACATT TGCCTATCCAAAAAGAAACCTAACACTACCCACTTTCCTTTTTGTCCTTTTCTTATTTACTTCCTTTTGTTTAAGTGCAT GTTGCTAATTTTTCCCCCATGGCTCTCTTCACAGGATCAACTGCAAGAACAGGCCAAACTGTGATAATGCGACAGCCTCA GTCTTCTGCACTGCCTCACTTCACTCTGTTCACATCTTTCTATAAATCAGCACTTGTTTGTACTATATATCCGAAATCAC AGTAAACAATATATTTTCCAACACATAGTGATACTAATGGATTTATAATACGATTAATGTTATGTTCAAACTTAATGTTC AGTCACAAGAGTGAGAAAGAGAGAAATATGAGTGATGATGAAATATTTATTACAAACAGTTTGGCCTGTTCAAAAGAGTG TCACTGTCTCGATTTTTTTTTTTATAAGCCACTGTCTCGAATATATTTATTACAAAATAATGTTACTGTTTATATTTT
CDS sequence (LotjaGi3g1v0061400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTAATTGCAGAATGATTCATGGTTTGCGAATCAAAGATGGAAAAGCCTCATATGTTTCTCGTTTTGTGAGAACTTC TCGTCTTAAACAAGAAGAATACTTTGGAGGCTCTAAATTTATGAAGATTGGAGATCTCAAGGGTCTATTTGGACTGCTAA TGGTTAACATGCAAATGTTGAGAACTAAATTGAAAGTACTGGATGGTTCATATGGACATGGAACAGCTAATACAGCTCTT GTTTATCACCATGGGAAGCTTCTAGCACTCTCGGAAGGAGATAAACCTTATGCTATTAAAGTTTTTGAAGATGGTGATTT GCAGACACTTGGCCTGCTAGATTATGACAAGAGATTGGACCATTCCTTCACTGCTCATCCAAAAGTTGACCCATTTTCTG GGGAGATGTTTACATTTGGTTATTCACATACACCGCCATATGTCACATACAGAGTAATTTCAAAGGATGGTTTTATGCAT GACCCTGTACCTATAACAGTATCAGACCCCATCATGATGCATGATTTTGCCATCACAGAGAACTACGCCATCTTTATGGA TCTTCCTCTGTACTTTAGACCAAAGGAAATGGTGAAAAATAAAACACTGATATTCTCCTTTGATTCAACCAAGAAAGCTC GCTTTGGTGTCCTACCTCGGTATGCTAAGGATGATAAGCAAATTAGATGGTTTGAGCTACCAAACTGCTTCATATTCCAC AATGCCAATGCTTGGGAGGAGGAGGATGAAGTTGTTTTGATCACATGTCGCCTTGAGAATCCAGAGTTGGACAATGTTGG CGGGGCTGTCAAGGAAAAGCTCGAAAGTTTCTCAAATGAGCTGTATGAAATGAGGTTTAACATGAAAACGGGTGAAGCTT CTCAACAGAAACTATCAGCATCTACAGTAGATTTTCCTAGGGTGAATGAAAGCTACACTGGCAGGAAACAGCGATATGTA TATGGAACTATATTAGACAGCATTGCAAAAGTTACCGGGGTTGTTAAATTTGATTTGCATGCCAAACCGGATTCTGGAAA AACAAAGCTTGAAGTTGGAGGAAATGTTCAGGGTCTCTATGACTTGGGACCAGGGAAGTTTGGATCTGAGGCTGTTTATG TCCCACGTGTCCCTGGCACCGATTCTGAAGAAGATGATGGATACTTGATCCTATTTGCACATGATGAGAATACCGGCAAA TCATTCGTGCATGTCATCGATGCAAAAACAATGTCAGCAGATCCTATTGCAGTTGTAGAATTGCCGCATAGAGTTCCATA TGGTTTCCACGCCTTCTTTGTGACAGAGGATCAACTGCAAGAACAGGCCAAACTGTGA
Protein sequence (LotjaGi3g1v0061400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVNCRMIHGLRIKDGKASYVSRFVRTSRLKQEEYFGGSKFMKIGDLKGLFGLLMVNMQMLRTKLKVLDGSYGHGTANTAL VYHHGKLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLDHSFTAHPKVDPFSGEMFTFGYSHTPPYVTYRVISKDGFMH DPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKQIRWFELPNCFIFH NANAWEEEDEVVLITCRLENPELDNVGGAVKEKLESFSNELYEMRFNMKTGEASQQKLSASTVDFPRVNESYTGRKQRYV YGTILDSIAKVTGVVKFDLHAKPDSGKTKLEVGGNVQGLYDLGPGKFGSEAVYVPRVPGTDSEEDDGYLILFAHDENTGK SFVHVIDAKTMSADPIAVVELPHRVPYGFHAFFVTEDQLQEQAKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 441 | 436 | 7.9E-253 | – | |
| PANTHER | 6 | 441 | 436 | 7.9E-253 | ||
| Pfam | 6 | 434 | 429 | 3.5E-107 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0061400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…