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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0082700 |
| Transcript ID | LotjaGi3g1v0082700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zein-binding protein; TAIR: AT1G04890.1 zein-binding protein (Protein of unknown function, DUF593); Swiss-Prot: sp|Q9CAC4|MYOB2_ARATH Myosin-binding protein 2; TrEMBL-Plants: tr|I1MMD3|I1MMD3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0082700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:9213467..9218673) extracted from Lotus japonicus Gifu genome v1.2.
TTTTTTTTGAAACTTACTAGTATTATACATTAAAACTTGCATAATTTAGTGAGATTTGTATGAATTTCATGATTTTCACC TATCATGAAGAACGTGTACTACTAAAGACAACAATGATAAAATTGCACGTCACATTCACGTGGAAAAAATCAGAAAGACA CAGTGACGACGCCGTTTCATCTCTGTGACACAACTTTCCATTGGGCCACAATGTCTCAGTCCTTGTCCTGGACGACAATG ATGGAGTTCGGTGGAACCTTGGTGGTTTTGCCTTTGCAATAACTTATTCATTCTTGATTTCTTTATACAAACTTCAAAAT TTCCATGTTATCCTCAAAATTCTTCACTGTTCTTGTAGATTCCTTTCTGGGTTTTTCATCTCTACCCTTTTGACTCTTCA GCCTCAACTTTTGAACCTCCAACCAACTTTGTATCAAATCCCAGTTTCCTTTCTGGGTTTGTAGTTTCATCAAAGCATGA TCTTGGGTTTCTGTTTTGTTTTTGTTTTTGTGTTTTTCTTCAAGTTGTTCTACTACATGCTTTGATTTCAATCTTTTTTT TTTCTTCAACATAGTGTCTCATTCTTTATATGGCTGGTTTTGTTTGTGGATTTTGATATCTGGGTCGGTGAAAAGTTTCA ATTTTGCTTGGTGGGTATCTTGTGTACTTGTGAGGGTCATTTGCTCCTTCTGAGTTCTTCAGGGCAAGATGGCTTTGCCG GAAATTCATTCTTGGACTTTAGGGGGATTGGTTGGAGCTTTTGTTGATCTTGCTATAGCTTATTTCTTGCTATGTGGATC TGCTTTTGCTTTCTTTGCTTACAAATTGTGCATGTTTTTTGGACTTTTCTTGCCTTGCCCATGCAAGGGGAGTTTTGGGT ATAGGAATAGCAATTTCTGTGTGCATAAAATGCTGTTTGAGTGGCCTTCAAGGAAGATATGCTCAATTCAAGTGATGGCT GTGAGAAGGTTTCCTTTTGATGTTTTGTGGTTGAAGGGTCATTCATGCAATGCCAATGATAAAATGGTTGCCCAGAAAAT GTTTGATAATAGGCTTGTTGAATTGGAAGATGAGGCATCCTGCAGTTCATATGCAAGCCCAAGATTGGTTTCCTTAGAAA AGGAGAATGGTTATGATGCTAAGGGAAAGAGGGTCATGAGTCTGAAACGAAGATCCGGGATTCGGCGCAGGAGGAGGAGT GGTTATGATTGTGGGAAAATCTCTTCGGTTGTTCCTTCTGATAGTCTTCAATCTGATGTTGCCGTCACTTCCTGTTTGCC ATGTGATGGCAGTATAATCAGAGATAGAACCAGTGAAAGAATATATCCTGCTTCAGGGAAAGAAGTTAGTGTACACTGTA AGTGAGAATTTACCAAATCTTCATTCATTCATTCAATGATTTCAATTAAAATGATATATTGTTTATGCGAATTCACAGGC TTCTAATATATGCTATACTAGGCTAGCTCGCTCAGCATCTTGTGATCATAACGACAGATGATTTTTCTGAAGTTTCAATG TGTAATGTTAGAAGTATAATAGAAATTCACTCATGTGTCTTCACAGTTCACACAATGGCTTAACTTTTGGATAGTTAGTT TATGACATGGTATTACAACCTCTATAACCCCGTGGTCTAGAATTCAATCATTGTTGCCCCCAATCATCCTAATAAAAAGA GTTGAATTTCAGCAGAGTACGTGGATAGTGTTCGATCATTGCTGCCACTAATTATTCTGATAAAAATAGTTGAATTTCAG CACAAGTTAGAAGAGTCTGTGCATTGTCCACGCTGCAAGCCAAATGAGCTATTGCATGAGGAGGCATGTTAGAAGTATAA TATAAAATCATCCATGTCGCTTCACCCAACATCTTAAGCTCTTAGGATTTTGGTTCATGACGAATAGCTTTGAATCTTAC ATTCTTATTGAATACCTATACTATATTTCTATTATTTTATGCACGCTGCTGAATTTTGGCTTTTAACTTCCCTGTATTTT TCCATCCTTCTATTTTTAGACGTTGAAGATGCCCAAAGTGGTCATGATTTGGATGAAAAGACCTGTCACAGTTATGAATT TAATGGATCAATAGTTGATAGTCCAGAACAGGACAAATATTCATCCTCATTGGAACACTACATGAGTAATATGCAAGACA ATTTCCAGATTATTGGAAATGAAGGGGACCGTATCAAGATGTTGGAAAATGCACTTAAAGAAGAGAAAGCTGCCTATGCT GCTCTATACCAAGAGCTAGAGAAGGAGAGAGCTGCATCTGCTAGTGCTGCTGATGAAGCCATGGCTATGATATCGCGTCT GCAAGAGGAGAAGGCATCCATGGAAATGGAAATGAGGCAATACCAGAGGATGATAGAAGAAAGAGATGCTTATGAGGAAG AAGAGATGAATATTCTTCAAGAGATCCTTATAAGAAGGGAAAGGGAGTATCACTCTCTGGAAAAGGAACTTGAATCTTAT AGGCAGACAAATTCGAATGGAAGGGATGGCAGGACGAAGTTGCAGCTCGATGGACAAAGGCTACCAATTTCAGTTGAAAG ATATGAAGATCCACCACAGATTGAAAGCACCATATCAATTGTTAAGAAAGATGAAATAGTAAACATTTCATCAAATTACA TGGTTGCTGAGGATTATATCAATACAGAAGATGGAGAAGAGCTGGAGAAAAACACAGAGCGCAAGGGTCAAGGGCATGAA GATCTGCATAGTTGCTTTTATGATACTGAACCTGATGTACTTGATGTCCATGTTGTTGATGACAACATAGAACTTAGGGA AGAGGAAAATGAAAAGTTACGTAGTTATTCATCTGGTACTCTTTCAAATGAACATGATGTGAGTATTGATGGTCCAGCTA GTCAGTTATCTATGTTCTCTAACTCAAGATGCAAAACTTTGCCTTCTGATTCTGGAAGTGATTCTTCATGTGCAGTTCAT AATGAAAAGTTAAAGATTGACAATGAGATTGAAATTCTCGGAGAAAGGCTAAGGATGGTAAAACATGAAAAAGAAAAATT AACTTTTTTCGCGGAGAACAGAGAAAGTGAAAAAGATCGTTTGAAGCTTCTGGAGGAGATACCGAACCATGTTCAACAAA TTAAACAGTTAAGGAACCCTGTACGTGGGACTTCCTTGCCCCCTTCATCAGCAAAGGTATAACTCACCCCTTCTTATTTA CAAAGCTTTAATTTACTATTGAAATTAAGTTATTCTCTAGACAAGTGTATGTGGTGATTGTAGGTTATGTGCAACAATTC TTAAGTCATGATCATCTATTGTTTTTCACCAAATTTCATGTGCTAATTACACTTCTTTCTAGCATATATTGGTTTCTTAT GCTTCAATTATATGAGACAAAGGACAAAGATTAGCTTGAATTTGACTTATCTCCTCAATTACAAATTATTATATGGACAG AATCAAGGTACTGGTTCTCGTGGTTGAAATAGACTTTCTTATATTGTTTATAGAGCTTTTAAAAGCTCAAATTCACGTAT TTTTTTTGGACTTGTTTGAAGAGTACATTCGACGTAAGCTTAAGGAGTCTAACAATCTGATCTAAAAACACTTAACTTTG GTAACCCCAGGAACTTCTGTTTTACTTTCTATATAATGAACCAGTGTCTGTAGTTTTAAACTTATCATGATTTAACTGCA AGCAATTAGGCAGATTTCTTACTCTTGTAGTAAGGATGAAATGCTACCTTGCCCGTCCGTATTGTGATGTCTGAGGAACT ATCTTATTACATACTAACGTTATCAAAGTGAGTTATCATACTAAGAGCTCGTTTGGATACAGGCTTATTAGAGGCTTATA TACTATAAAGATCACTAGATAAGCTTTAATAAGTGCTCTTTGGTTTTGCATATCTCCATTGCCTAACTTTATGGCTGTAT CTCTTAAATTACCGTGTCATGTAGTGTATCTGTAACTTTTCCTGAGCATAATGCTCACAGAAGGAAAACATCAAAACTCA AAAAGCTTAGTCATGAAGGTCCAACTTGAAACCTGCGGTTACTCCCAATTGTGAAAGTTTTGCTTGAATTGATATTTTCT TGCATATCAATATTTCTGAAACAGATATTGTTTGGTGCTAATTCAACATTATAACATACTTAATGGTATATTTCTTGTAT TTGTCACTGTTGTTTAGCTTAGTGACCGGTCATAATGTAGCTCTTGGTCATTGTTATGTTGCTTTATGGCCAATGCTGAT AATATCTATTTCTTCTCAGGCAAGCTTGAAGAAAAGTGCGTCTTGGGAGACATGTGAAAGCTGCTAAATCATGTAGAGTT GCACGTTTTCAACTGTCATAAGCTTTGTCCTTGGCAACTTGTAAATGGAAAATACCTCTGGTAGCCTCTAGAAATTCACC ACCATTTCCTTTACCTTGGTACATGTTTTAGTTATCTAAATAAACCTTATCATAGTCCACTAGGTTCAATATGTAGTCAA AGCAGTTTTGAAGCCTTGAAGGTACATGGGTTATGATGTGTGTTTGCCTTAGTGGGATATGGCACATGGGTTATGAACTG TAAGTAACTGCATATCCTTTTCCTCCATGTTCTTGTAGCTTGAGGTATCGTGTCTATATTTGATAGAGAACAGCTTATAA ATGAAATTATTGCTTCCAAATTCTTTATGTTGTAATTATGTGCTAGTGTGTGTAGTAATAATGAATAATGATTATGTCCT TGTGTGTGTGATTATGCTATTAAAAAGATTTAGAAGTTTTTTAAATTAAAGCCTGATCTTCCTTAAAAAAAAAATATTAA AGCCTGGTCAAGGGCAAATGTATATGAGAAAATCAGGAAGATCAGGCTTTAATTTTGGGGGGCACATAAAAACATCATTC AGTTGGGGGGCAATCCTCCTCGGGGAGAAACCCTAACGCTCGTACTTAGGAGTGAGCATCTGCTGGCCTCCCCAACATGC TATTGGTGTCATGCTCGGTAGTCCTTGATTCTCATAAGAACATTTGGCATTGTTCGTTGGGTAATTCACTGTCCCTCTGG AGTCAATTTTCTTTCTACCGATCTTGTTGATCAAATAAAGCACAACAATTAGTCCAATCACACGTCCCGTGAGAGATTCA TAAGAAACTCGAAGAAAATTGAAGAACTTTCGAAGTGATGCTATATCAAGTAATGCGCAAAAACCATTTCCACTAGAAGA TTCAGCT
CDS sequence (LotjaGi3g1v0082700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTGCCGGAAATTCATTCTTGGACTTTAGGGGGATTGGTTGGAGCTTTTGTTGATCTTGCTATAGCTTATTTCTT GCTATGTGGATCTGCTTTTGCTTTCTTTGCTTACAAATTGTGCATGTTTTTTGGACTTTTCTTGCCTTGCCCATGCAAGG GGAGTTTTGGGTATAGGAATAGCAATTTCTGTGTGCATAAAATGCTGTTTGAGTGGCCTTCAAGGAAGATATGCTCAATT CAAGTGATGGCTGTGAGAAGGTTTCCTTTTGATGTTTTGTGGTTGAAGGGTCATTCATGCAATGCCAATGATAAAATGGT TGCCCAGAAAATGTTTGATAATAGGCTTGTTGAATTGGAAGATGAGGCATCCTGCAGTTCATATGCAAGCCCAAGATTGG TTTCCTTAGAAAAGGAGAATGGTTATGATGCTAAGGGAAAGAGGGTCATGAGTCTGAAACGAAGATCCGGGATTCGGCGC AGGAGGAGGAGTGGTTATGATTGTGGGAAAATCTCTTCGGTTGTTCCTTCTGATAGTCTTCAATCTGATGTTGCCGTCAC TTCCTGTTTGCCATGTGATGGCAGTATAATCAGAGATAGAACCAGTGAAAGAATATATCCTGCTTCAGGGAAAGAAGTTA GTGTACACTACGTTGAAGATGCCCAAAGTGGTCATGATTTGGATGAAAAGACCTGTCACAGTTATGAATTTAATGGATCA ATAGTTGATAGTCCAGAACAGGACAAATATTCATCCTCATTGGAACACTACATGAGTAATATGCAAGACAATTTCCAGAT TATTGGAAATGAAGGGGACCGTATCAAGATGTTGGAAAATGCACTTAAAGAAGAGAAAGCTGCCTATGCTGCTCTATACC AAGAGCTAGAGAAGGAGAGAGCTGCATCTGCTAGTGCTGCTGATGAAGCCATGGCTATGATATCGCGTCTGCAAGAGGAG AAGGCATCCATGGAAATGGAAATGAGGCAATACCAGAGGATGATAGAAGAAAGAGATGCTTATGAGGAAGAAGAGATGAA TATTCTTCAAGAGATCCTTATAAGAAGGGAAAGGGAGTATCACTCTCTGGAAAAGGAACTTGAATCTTATAGGCAGACAA ATTCGAATGGAAGGGATGGCAGGACGAAGTTGCAGCTCGATGGACAAAGGCTACCAATTTCAGTTGAAAGATATGAAGAT CCACCACAGATTGAAAGCACCATATCAATTGTTAAGAAAGATGAAATAGTAAACATTTCATCAAATTACATGGTTGCTGA GGATTATATCAATACAGAAGATGGAGAAGAGCTGGAGAAAAACACAGAGCGCAAGGGTCAAGGGCATGAAGATCTGCATA GTTGCTTTTATGATACTGAACCTGATGTACTTGATGTCCATGTTGTTGATGACAACATAGAACTTAGGGAAGAGGAAAAT GAAAAGTTACGTAGTTATTCATCTGGTACTCTTTCAAATGAACATGATGTGAGTATTGATGGTCCAGCTAGTCAGTTATC TATGTTCTCTAACTCAAGATGCAAAACTTTGCCTTCTGATTCTGGAAGTGATTCTTCATGTGCAGTTCATAATGAAAAGT TAAAGATTGACAATGAGATTGAAATTCTCGGAGAAAGGCTAAGGATGGTAAAACATGAAAAAGAAAAATTAACTTTTTTC GCGGAGAACAGAGAAAGTGAAAAAGATCGTTTGAAGCTTCTGGAGGAGATACCGAACCATGTTCAACAAATTAAACAGTT AAGGAACCCTGTACGTGGGACTTCCTTGCCCCCTTCATCAGCAAAGGCAAGCTTGAAGAAAAGTGCGTCTTGGGAGACAT GTGAAAGCTGCTAA
Protein sequence (LotjaGi3g1v0082700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALPEIHSWTLGGLVGAFVDLAIAYFLLCGSAFAFFAYKLCMFFGLFLPCPCKGSFGYRNSNFCVHKMLFEWPSRKICSI QVMAVRRFPFDVLWLKGHSCNANDKMVAQKMFDNRLVELEDEASCSSYASPRLVSLEKENGYDAKGKRVMSLKRRSGIRR RRRSGYDCGKISSVVPSDSLQSDVAVTSCLPCDGSIIRDRTSERIYPASGKEVSVHYVEDAQSGHDLDEKTCHSYEFNGS IVDSPEQDKYSSSLEHYMSNMQDNFQIIGNEGDRIKMLENALKEEKAAYAALYQELEKERAASASAADEAMAMISRLQEE KASMEMEMRQYQRMIEERDAYEEEEMNILQEILIRREREYHSLEKELESYRQTNSNGRDGRTKLQLDGQRLPISVERYED PPQIESTISIVKKDEIVNISSNYMVAEDYINTEDGEELEKNTERKGQGHEDLHSCFYDTEPDVLDVHVVDDNIELREEEN EKLRSYSSGTLSNEHDVSIDGPASQLSMFSNSRCKTLPSDSGSDSSCAVHNEKLKIDNEIEILGERLRMVKHEKEKLTFF AENRESEKDRLKLLEEIPNHVQQIKQLRNPVRGTSLPPSSAKASLKKSASWETCESC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 1 | 609 | 609 | 1.1E-215 | – | |
| PANTHER | 1 | 609 | 609 | 1.1E-215 | – | |
| Phobius | 6 | 28 | 23 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 29 | 39 | 11 | - | – | |
| Phobius | 40 | 58 | 19 | - | – | |
| Phobius | 59 | 617 | 559 | - | – | |
| ProSiteProfiles | 273 | 371 | 99 | 20.152 | ||
| Coils | 275 | 302 | 28 | - | – | |
| Pfam | 277 | 367 | 91 | 2.2E-30 | ||
| Coils | 307 | 373 | 67 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0082700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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