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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0099500 |
| Transcript ID | LotjaGi3g1v0099500.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Isoaspartyl peptidase/L-asparaginase; TAIR: AT5G61540.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; Swiss-Prot: sp|Q56W64|ASPG3_ARATH Probable isoaspartyl peptidase/L-asparaginase 3; TrEMBL-Plants: tr|G7IVL2|G7IVL2_MEDTR Isoaspartyl peptidase/L-asparaginase; Found in the gene: LotjaGi3g1v0099500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12368876..12372483) extracted from Lotus japonicus Gifu genome v1.2.
CTTAAAGGTTGCTTCTACTTCTATATTCAGTAGCCTTCAAGAACAGAGAACATTTGGAGAAGCTGCATTTCCATTTCCAT GGCTGCAAAGGCACAGCCACTCAAAATTACTTCACTCTTTAACTTCATCTTGCTCCTCACTTTGGTATTTTACACACCAT ATGCACTTTTCTTCACCTTTGGATATATTTTTATGTGATGGGTGTGTATTCATGTTTCGTATCATCAGGTTCTGGGGCAT GAAACTGTGGAATTGGAGCAGTACCCATTGGTTGTGAGCACCTGGCCGTTTGTTGAGGCTGTCAGAGCTGCATGGAGGGC TGTTGATGGTGGTTCTTCAGCTGTGGATTCCGTCGTTGAAGGTTGCTCGGCTTGTGAGGAACTCAGGTGTGATGGAACAG GTACTAGGGTTTTGAATGTTTGGATGATTACATAGATTTTCAATATGAATTTTGGCATTTATTTTGTGTTAAATGGAAAC TGTATTATTTAAAAAATTCATGTTTTTAGATGTAGTGTGTGTGAGGAAAAATGAGGAAAAATTGTAAATTTATCTTTCAA TATTGTGCTTTGAAAATATTTGATCATTGATTTTGACTAGTAGCTTTTTCCTTTCTTGCTGAATGCTTGTTTAGGATAAT GTTAACCCTGAGTTCACAGAATATTATTGTTTACATTACCTTATAGGAGGAGGTTGTTCTATTGATATGCTTTATTATCA TATGCAATTTATACAGTCTTAATATCTCAACAAAATTATCATTCAATTGTGACTTGTTTGTTGTGGCTTTTGAAAATAAC TTACTTGGAAGATTGATATTGGTAATAAACCTTTCTTGGTACGACGAGGAGAGATGAGAATGGCTACGAGCCTAGGACAG AGTTTTGATGCTGTTCTTGTTTTCTTTCTCTATGTGTGTGTATGTGGTTCTTATCTAGCTTGAGATTTACCTTCGGGGTT GTTTAATCAATGATTAACACAACTGGGCATTCCTTCTGATTAAACTATTCTAAACAGTTGGTCCGGGTGGGAGTCCTGAT GAGAATGGAGAAACTACAATTGACGCTCTGGTCATGGATGGGGTAGCTACCAATTACCATGTTCTACAGCTGTTGATTAT TTTCTGTCTTCCGTTCTATTTTTTCATGCATTGACATGATTTTCGGCCCTATCTTCTGCTAAGGGGATGCATAGGTGACT ATGGAAGTCGGAGCTGTTGGTGCCATGAGATACGTAAAGGATGGAATCAAGGCTGCTAGGTTAGTGATGCAACTTACTGA ACACACTTTGCTGGTAGGAGAGAAAGCATCCGAATTTGCAATTTCAATGGGTCTTCCAGGACCCACAAACCTGAGTTCCT CAGAGTCCATAGAGAAGTGGGCCAAATGGAAAGAAAGCAGCTGCCAACCAAATTTCAGGAAAAATGTGTCTCCTGCAAAT AGTTGTGGTCCTTATCGTCCAACAAATTATCTGCAGCTTCAAGATCAAACATGTTCTAATGCTGGTCAGACATCAAGATT CCTTTATGTTGGTCCTCACAGCCATGATACTATATCAATGGCTGTTATTGACAGAGTAAGGTTATCATAATAACATCAAA ATTGATTTGTACACATCATGTATCAATTGAAATGAAACCTTTTTATTTGACACAGATGGGGCACATTGCTGTTGGCACAT CAACTAATGGGGCAACATTCAAAATTCCTGGAAGGTAAACTTGTCGGTGACAATATTGGAAGTGGGCAGAACTTCTCAGC TTAAGTGATTCTGAAAAGGGGAGAATGCATTGCAAAATAATTTCTGTACAGGGTTTTAGCTTATATAATTTATGTAGGAT TTCTATATGAATAAATGAGAGGAGAAGGCGAGAAGTGAGAAAGATGCTATTCTGATTTTTGTATGAATAAAATAGAGGAT TCCATAATGTATGACAGTAAGTAATATGACCGACCCATGAGAGAAGGGGAGAATGGTGTGTAAAATAAAACAGAGGAGAG GATGATGGATGCAGAACCTTAAGGTTGTCTGGCAGCAGCAGAGCAGAGCAGTGTCAGCAGCAATAGTTTATATGGGTCTC CCCTGGTTTAGCATGACCCCTGGTTGAAGACTGTTGTGACAGATAAAAACAAAGATGTGGGACTAGTGTGCTTGACATGA GCATAGTTTGAGAGTTAAATTGCTATTACATATAGTCTGGGGACTAATTTGATAACCATTATATACGTTGGAGACTAATA TGAGTGCTTACTCAATTAGAGAGTCATGTCTTTGTCTCTTATTGCCGGGATTGGTTCCATTCGGGCCATGGAGAATCGCT TCTGTCATTTCCCAAATAGACATGCTCGTAGATGTAAACAGCACACACGTCATGCAACAGATATCAATCCCCCTTAATTT GTTCTTTAGAAGCTTTTTATAATTATGTTTTGTTTTTAAAAAAATTCTTCATCACAGGGTTGGTGATGGTCCCATAGCTG GATCCTCAGCATATGCTGATAATGAAGTCGGTGCATGTTGTGCAACTGGGGATGGTGACATCATGATGCGCTTCCTTCCA TGGTAGAAACAAAACTCCGTAGTTTCTATCATTTAGATTATGAATTTCTTTGCCTTTGATTGTTTCAACCTTTCTTTAAA CTGTTGTGGTGTTGGTCCTAAGAAAAATGTCACCAACAGCTATAGCAACCATATCATTTCACTTTGAATTTAAGGGAGGG GTGGGGGGGGGGGGGGAGGTATCATATAATAAAAGTCTACATTCATGAAGGAGCTAATGTGTGCCTATTTGATACTTATC AAATCTTGTTAATCTTGAGGTGCGACTGCTGTTTAGGGTGAACTTAGCTCATCCCTCTTGTGAAGTTGCTTGGGTCAATA GTTAAATAGTAATCCTTTTTTTTGGTTACAAGAGGAAAAATAAATAGTAATCCTTTTGAAGTGTAATGTGTGGAAACTTA AATTTTTTTCTGACAATATTGATGCACAAATCACCCTGTTTGTAGTTTCAAGAAGTCCTTGTTCTTGTATGTTTACAGTT TTTATTAATCATTGGTATAATGGTATGTGTTTGGTCTCTGACCACCAAGATTAACACTACTATTCAATTTCAGTTATCAA GTTGTAGAAAGCATGAGGCTGGGAATGGAACCTAAACTTGCTGCTAAGGATGCACTAGCACGAATAGCAAGAAAATTTCC AGATTTTCTTGGAGCTGTTGTTGCTCTCAATAAGAAGGGGGAACATGCCGGTGCCTGCCATGGTTGGACATTTAAATACT CTGTAAGGAGCCCTGCAATGAAAGATGTGGAAGTCTTTACCGTGCTACCCTGAGATTGACTGTTCATGATATTAGTATCT TCCATCAATTAAATTCAAGTTAGTATGCTAATTGTGTTGGTTGAGGAAAGTTGATGGCATACAAGGTGCTGATATTGTAA TTCCTTGATATGAATTGTAGATTTGGCATACAAGATTCATCTATTATATATTTCTTACAATATCAATGCTTGCATGAAGA TTTCAGACTACAGGATTTCAATATATTGACAGTAGTTTCTTTTACCTCGATGGGTCCGTGAAATTTGTTTATATTAGTCT TTATTTGG
CDS sequence (LotjaGi3g1v0099500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCAAAGGCACAGCCACTCAAAATTACTTCACTCTTTAACTTCATCTTGCTCCTCACTTTGGTTCTGGGGCATGA AACTGTGGAATTGGAGCAGTACCCATTGGTTGTGAGCACCTGGCCGTTTGTTGAGGCTGTCAGAGCTGCATGGAGGGCTG TTGATGGTGGTTCTTCAGCTGTGGATTCCGTCGTTGAAGGTTGCTCGGCTTGTGAGGAACTCAGGTGTGATGGAACAGTT GGTCCGGGTGGGAGTCCTGATGAGAATGGAGAAACTACAATTGACGCTCTGGTCATGGATGGGGTGACTATGGAAGTCGG AGCTGTTGGTGCCATGAGATACGTAAAGGATGGAATCAAGGCTGCTAGGTTAGTGATGCAACTTACTGAACACACTTTGC TGGTAGGAGAGAAAGCATCCGAATTTGCAATTTCAATGGGTCTTCCAGGACCCACAAACCTGAGTTCCTCAGAGTCCATA GAGAAGTGGGCCAAATGGAAAGAAAGCAGCTGCCAACCAAATTTCAGGAAAAATGTGTCTCCTGCAAATAGTTGTGGTCC TTATCGTCCAACAAATTATCTGCAGCTTCAAGATCAAACATGTTCTAATGCTGGTCAGACATCAAGATTCCTTTATGTTG GTCCTCACAGCCATGATACTATATCAATGGCTGTTATTGACAGAATGGGGCACATTGCTGTTGGCACATCAACTAATGGG GCAACATTCAAAATTCCTGGAAGGGTTGGTGATGGTCCCATAGCTGGATCCTCAGCATATGCTGATAATGAAGTCGGTGC ATGTTGTGCAACTGGGGATGGTGACATCATGATGCGCTTCCTTCCATGTTATCAAGTTGTAGAAAGCATGAGGCTGGGAA TGGAACCTAAACTTGCTGCTAAGGATGCACTAGCACGAATAGCAAGAAAATTTCCAGATTTTCTTGGAGCTGTTGTTGCT CTCAATAAGAAGGGGGAACATGCCGGTGCCTGCCATGGTTGGACATTTAAATACTCTGTAAGGAGCCCTGCAATGAAAGA TGTGGAAGTCTTTACCGTGCTACCCTGA
Protein sequence (LotjaGi3g1v0099500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAKAQPLKITSLFNFILLLTLVLGHETVELEQYPLVVSTWPFVEAVRAAWRAVDGGSSAVDSVVEGCSACEELRCDGTV GPGGSPDENGETTIDALVMDGVTMEVGAVGAMRYVKDGIKAARLVMQLTEHTLLVGEKASEFAISMGLPGPTNLSSSESI EKWAKWKESSCQPNFRKNVSPANSCGPYRPTNYLQLQDQTCSNAGQTSRFLYVGPHSHDTISMAVIDRMGHIAVGTSTNG ATFKIPGRVGDGPIAGSSAYADNEVGACCATGDGDIMMRFLPCYQVVESMRLGMEPKLAAKDALARIARKFPDFLGAVVA LNKKGEHAGACHGWTFKYSVRSPAMKDVEVFTVLP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | - | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 10 | 20 | 11 | - | – | |
| Phobius | 21 | 25 | 5 | - | – | |
| PANTHER | 25 | 353 | 329 | 4.6E-147 | – | |
| PANTHER | 25 | 353 | 329 | 4.6E-147 | ||
| Phobius | 26 | 355 | 330 | - | – | |
| SUPERFAMILY | 35 | 346 | 312 | 7.5E-87 | ||
| CDD | 36 | 342 | 307 | 4.26389E-172 | – | |
| Pfam | 43 | 333 | 291 | 1.4E-73 | ||
| Gene3D | 220 | 353 | 134 | 3.9E-46 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi3g1v0099500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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