Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0126000 |
| Transcript ID | LotjaGi3g1v0126000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Emsy N terminus domain-containing family protein; TAIR: AT5G13020.1 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; Swiss-Prot: sp|F4K2F0|EML3_ARATH Protein EMSY-LIKE 3; TrEMBL-Plants: tr|G7IJ02|G7IJ02_MEDTR Emsy amine-terminus (ENT)/plant tudor-like domain protein; Found in the gene: LotjaGi3g1v0126000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:15430783..15437698) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAAGGTAACGAATTAAAAAACGCGCGAGCGAGTCGCATCCACAATAACTCAGCAACCGAGTTCGACTCACCAAATTG AGATTCTACACCACTACTCTACACAGAGCTTCGATCTTCCCAATTCCAATCCACCTTCATCGTTTCCTTCATCAACCACA CTCCTTCTTCTTCCATTGTTGCCACTTCTTCAATTTCGGTGGAAAAAGGGGTTTTGTTTTCTGCGTAATTTTCTTGGATC TGGGTACTCTGCATTCCCATTCAAACTGGCTATGGATTACGAACCCTACGATAGTAGCGGTGAGCTTCATTCTAAATTTC TTCCTTAATTCTGTTTTTTTTTCCATATTGTAACGATAATTTGAAGCTTTCTCTTTTTTCTGTTCATTCTCTCTGTTTTT CAATTTTAGGGTTAGGGCTTTGTTTGAATTTCTTTGCCACTGTTTTGATATTTTCATCCAAAACAAATGGGTTAGCATCA AAATTCAATTTTTTTCATGCTGTGCTTGCAGAATGAGTGAATTAGCTGTGTTTGATTAGTGAGCAAAATACCAATACATG TTTTACTTTGTTAATATCTCAAGGGAATTAAGTGATTGGTTATTTTCTTGTCAAAGTTAATAGCTTTTCTTCCTATGGAC ACTTTGGGTAGCAGAGAGGGGTGGAAGGTGCCCTTGAGGCACTAGGGGGTTTAAACAACTTCGAGACGCGCCGAGAAGCT CAAAAGATGCATTAGAAATAAAAGAAGAGAGTTGTAAATTATTAGGCTGTTTTGCCAAGCCTCTTGGTTTCTTGCTTTAG TTGGCGATATGGCACTAAAGGCACGCCTCACCTCAGCACGAATGGCACGCCAAAGGTGTCAGAAGTGTGAGACTGACTGA AAGGTCTGCACCTCAATCAGGAAGGTGCTGAATGCTTCTAGGGCGTTGGACTGTACTGGTTGAAAGTTTGACTGAGAAGT AGTTTATTGAAACTTTCAGACTCAGAAAGAAGAAACGTGCTGAAGTGTTTATCCTGCTGTTAGCAAGGATTGAGTTTTTC TAAATCAAATGTTAACGCACTCAAGATTCTTTCATGTCTATATCTTTTACGCCCCTTTTTTTAGACACAAAACTGTCTAA GTGATTCCCTGTGCCATTCAGTGTAACACTGACATGTAGCAGACTGATTGCATTGTCCAATGGTGAAAATTTGTTGCATT GACAATATTTTTTCCCCTAACTGCAATATCTCTTACCTAGTGAAATGTTGTCCTCAGTTTCCATTTTTGAATGCTACGCT AGTATACAATTCCTTATGGCCTTAGTAAGATATCGTTATGCATATTTTAGGATCTATGGTCCTGTCTGGCTGCTATTCTC ATATCCGTTCACTTGATCCGATGATTGCAGGAACTGATGATGACCTTCCACCAACACATCAAAATAGAATTCCCAGAGGG GCACGTCTTGCTGGGAATGGAAGATCTGCTATAGGTTCAATTTCATACCCCAGGATGTATGGTGAAATTGATATGGAAAC TCAAATTCACCAACTTGAGCAGGAAGCTTACAGTTCAGTTCTGCGAGCCTTTAAGGCTCAAGCTGATGCCATTACTTGGG TACATTTTATTATTTTGTTTTCACATATCTAATATTTTTTAATTTGTTTCACCTGGTTTAAATGACTGCTAAGTGGCATG CATTTTCTTCAGGACAAGGAAACTTTGCTTACAGACCTAAGAAAAGAATTAAGATTATCAAATGAAGAACACAGGGAACT TCTGGGCCGTGTTAATGCTGATGATGTCATACATAGAATAAGGTCTGATAAATTCTCAAAACATGGTTTCTTTTGGTCAA TTGTTTAGAAGTCAGACTCTTACTTTTTCCGTAGACACATTCTATCTTTTTTTATCAGTATTTCATTTCGTGTTGATTTT AGGGAGTGGAGACAGACAGGAGGCCATCAGCCTGGTGTGCTGAGTACTGGACTGGCTATTCATGATTCAATTCCGAGTCC CACAGTCTCTGCATCCCGTAAGAAGCCGAAGATAACACCCTCTGTACCATCACAATCTTTTGGTGGGCCTTCTCCTCCAT TTCACTCGCAACCCTCTGCTGCATCCCTCCAGCCATCTTCTGTTGCAAAACGTGGATCTGTCCCTGGATCTAAGGGAAAG AAGCAAAAAGCTGTTAGTAAATGTTATAATATTTATTTTTTTAAAGCTCAAAGATATATATAATATATAGTAGAAAGTGT TGAGAAACAACCCCTTCTCAACATGGGTACAGTAACCTAACAGCAAAAAGCTGATAAAACTCTGCCACTATAGCAAAACC CACGAGAAACAACCAAGGAGCACGAAAAAGTGCTTAACACCGATCCAAAACCTAAAGTGTTTACCCCCATTGAAATCGAA AAGCGAGAAAACCCGCTCGATACCCACCTTAAACATTAAATTCCTCTACATTGCTCTTTATTTATCTACACCGAGCTTGG TCTTATCCCAATCTGAGCTGTTGAAAAAATTATTTGTCACTAACAAAAAATACATACATCAGCAACATTAAGTTTCTTAT TTTGGCTTTTATTTGTAGGGCCAAGTCTTGACAGGTGTATCTTCAAAAAAACAATATCCTTTATTAGGATCAGGTGGAAG GAATCAAGTGCCAGATAGAGTTACTTCTGGTACTGTTATGGCTGAGCTTGCCGAGGGAGTTGCATCATTTGATTCAGTGA TCGGTAGGAGAGTACGAACAAGATGGCCTGATGACAATAACTTCTATGAAGCTGTTATCTCTGACTACAGTCCAATTGAT GTACTTGCAGCCCCCCAATTATTTGAAAATTAGTTTGTCAATGTCAATTAGTTTATAGCTGACATGTTTACTTTTATTTT TAACTTTTCAGGGTCGACACAATCTGGTCTATGACATGGGGAGGGCAAATGAAACATGGGAATGGGTTAATCTGTCCGAG GTATATCTGCTACCGATAACTGTGGTGTAATTCTTGTGTGCTTTGTTACGATTAATCCCCTAGCAATAATTTATCATTGC AAAGCTATGGTTCTAGAAAACTTAGGGACTTCTTAAGAAAACTTAAGTGGCATTTAAGCAGTACGAGGACAAAGAGAAGT TCATGTTCTTTTGACTTTCCTCTTTCACCCCGATGGTCCCACCAGGGCCACCGCTCAAGAAAAAAAATTGCTGAGTTCTG ATAATGTTCCATGTCACTTTAAAATGAGTTTGTTGTCTTTTTTCTATGATCTGGTTTCTAGTCTTCTCATGAGCCCTAAA AGTGATTTACCATGAATGTTGCAGAAGAAAGTTCATTTTATCAACTAAATAATATTTAATTATGAATATTTCATATTTTT AGAACAAAGTTCTTTAACATTGCTAAAGTAGTCTATTAGGAATTTAAATAAATTCATGCTTGTGTGATGGTTTACTTTTT CAGATTTTGGGTATATGATATATCTAAAATGATTGAGAACGCTTTGTTATTTAACATCTTTGGCTAGAGTTCTGTAGAGG TTTTAATGCCTTTGGCTGTGCGTTAGTACAAAGAACAAATGGTCTTTATTGTTTATTATTATCATAAAAAGATTCTGAAG CCTCTGAATTAATTTATTATCAATTTGTCAATATCAGCTCTAAGGGCTGATGATAAGAATACAAAAGTTGAGAGCTTTTA TTAGGAAAGGAAAAGTTTGTTTCACTGGATGTGCAAAATTGCAATCAATGCTTCATTTCCCAATAAAAACTTTTTACTTT TGGATTCTAATCATCAGGCTAAGGACTGATGTTAACAATACCAATTTATGAATTGGTATCTAACCTAAAATCGTTAAACC TCAATGTCTAACAATTTAATTTGCGCCTAACCATACATGGGAGATTAGTCTCTTAGTCTTACCTAATAGGTAAGGAGATA CTAAGATTCTAGGGAATAAAAATGAGAGTTAGGGTGTGTTGGATAAAACTAAAAAACTTTTAGGCTTTAGCACTGTGTCC TGATTTAATAATCGTGAAAAACTAGGCACTAAATTAGTAATGTCTATACTGACACTGGTATGACACCTGTCACCATACAT AAATAATAGCATGTCCCAGTGCTATATCCTTCTAAGGTGCTGCTTAATATGGTAATTGTTTTTGGAGGGGATCTACTAAA TGGACCAATGAAGCACTATCCTGTCAACAGCTCTTTATCTTAGATTTCTTTTAGTTGGTTTGAAGCACAACATCTTTAGG ACTTAGTCTTAGGTACTCCACATATACCTTAAAATATCATATATGCACTGCTTTTGATCCTTTGTCTCTTTCTCAGTTCT AAACCAATGTTCAACTGAGCACTGTGGGAACAGGGAGAATGGAAATGCATGATTTAAAATGCTAAAATTGTTTTAAAGGA TACTAGCAGGCATTTAATATAATGAAATTGACTATACTGATGAAATATATTTTCACTTAAAATGTCAAGTAAGGAAATGA CTGCTCTAAAATATTGTTAATGATCTTGTGTTGAATATTGTCAGTTTTTGTTTACTTAATATCACTTTTGGCACGTAGTA CAACCTTTTCATTTTCAGCACCAAATTGAGATTTCAAACTGGGCTAATCTAGGAATCAGTATATAATGTGGTATCATGTC TGCATTAATGGCTGCAGCTACTGGTACCATATGAAAAGAAATATATACTCAGATAAACAGAATTTTGACTTTTTAAAACT TTCCCTATATACCCTGAATTCTGGTGCTTGTTTGATTTTCATGGGATTGAAGCATTGCTCCTTATTTATCTTGAATGCTC AATAATATTTAGAATGTGGATTTGCCATCTGCTTGATATGCTTAGCACTTCTTGGCACTATATTATTCTAGCTCCTTATA TACATTGTTTTGTAAATGCAGATCTCTCCTGAAGATTTTCAGTGGGTAGGTGAGGATCCCGGTATCAATAATCATGGGGG TTTTGGTGCATCTGGTCGTGGGATGAATGGGTCTACAGGACGTGATAGTGTTCCAGGAGCTGGAAGGGGTAGAGGAGCCA CGAAGGGCCAATCCAGAAAAAACTTTTTGCCATCACAGAATGGAATAGGAAAGAAGGCCCCAGATGATATACAAATACTT CACACTGAGACACTGGTCAAAGAGGTGACTGAATAGTTCAATCAAAATACTCTTTGATCTGCGATTGTTTGATCTTTTTA TGGCACATATTTAAATTCCCAGTGAACTTGCTAGGTGGAAAGGGTATTCAGTGCAAATCATCCTGATGCACTTGAAATTG AGAAAGCCAAGAAAGTATTGAAGGTAAGGGTGTATTTTGAATGCGGTCTGCCATTTCTTACACTTCCAGCTACTGATTTT TTTTATTCTCTAGCAAATGGTGTGTACAAATAATCATTAATGAATTAAATGCAGGATCATGAGCAGTCTCTTATTGATGC ACTTGAAAGAATTGCAGATCTTTCTGATGGTGAAAGTGGTACTTCTCAATATTCATACCAGATTGCAGTACTATCTGACA TTTCTTTCGTCTAAAATATTAGAATATTGTGGACGTTATTTACGTGCTGAGTATAGGAATTTGCATCGGTTCAGTTCTAG ATTTTTGTATATGCGATTTGAATTGAATTACACGTTATAGGAATTTCGGTGTCTATAAGGAATTTTGTTCAGCACTAGAT TAGTTTGGTCGGTTTGTAAAGTTCACTTCTGAAAGCTAGCATTTCACCATATGCCTGGTAATCTGCAAATTTGAGTGTAA ATAGGAGAGAAGTACAATGTTTTGGGATGAAAGGATTTGATCCACTGATTATTATGTGTTGCATGTGTGAAGTTGTTTCG ATTCCATATTTTTCACTTCCCTTTTTAAGCTATTTAATTTCAAACAATCACAGCCTAAGTGTCTAGTGATGCTAATCACT CTATTTTTAGAAGCATGTCGTCATCAAAGCATGAAATGATAAAAATACATTTCCCGTAATTACAATGTGAGTATTAATAA ATTTATAGATGATGTTTCTGGTCCATTGTGCTATTCAATGTTCCCTACTCGTTTCTTTGTACACTTCTTGATGTTCTTAT TGTCTATACAGATGAGGCTGGTCACCATCTATCACATGCTCAATCAATGGATCGAGAATGATGGAACAGCAACTTTGTAC AATGGCAAAGGAGGCATTATGGCTGCTAACTCATGGAGAAGATTGAACTTGTATTATGTCACAACAAAATTTCCCTGACA GATGATAGCTCTAGTCTTGGGTCATGTGCATTAGTCATTTAAGTAGGATGAAAATTATGTAGTTTCGTATTAGTTATTTA TTGAGATTAATAATTGACTTAGGATCAGGTGATGCTATTATGTGTATAAGTTCTTGTACTTTTTTGTGTCAAATTATGGG TCCGCTCTGCGCTCTTCTACTAAGAAATCAGAATAATGGTAGCAACAGATTTTTGTTTTTTTAAGTTTTAACACAGCAAA TATTAAGTGGTTTGGGGTTAACCAGCATAAATGTGTGATTTTTTATCCCTTATCTTTTTACATTTATGCTATGTTTGGAT GCAGAGTTGAAAATGAGAGGAAGGAACATAAGGGAAGAGATTATAAAAGGAAAATGGGGTGTTTTTCAAGTTGTTTCGAT TGAGAGAAAATGGTGGGAGAATGAAAGAAAAGGTAATGGAAATGAGTGCAAGACATAATTACTATTTTACCCATCAAATT ATTGTTTCAATATACATTTTATATCATAAAAAATATAATTATAATATTTTACACTAAATTATTATAATAAGATCATATTT CTACCTATTAAACCGGAGCTTGGGTCGTGGTTTCTATGCTCGGCAGCATGGGGGTGATCTTGTGTGCTGAGGTTCGGGCC CTCCTCCTCCTCCTGCTGCTGCTGCGTTGAAATCAT
CDS sequence (LotjaGi3g1v0126000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTACGAACCCTACGATAGTAGCGGAACTGATGATGACCTTCCACCAACACATCAAAATAGAATTCCCAGAGGGGC ACGTCTTGCTGGGAATGGAAGATCTGCTATAGGTTCAATTTCATACCCCAGGATGTATGGTGAAATTGATATGGAAACTC AAATTCACCAACTTGAGCAGGAAGCTTACAGTTCAGTTCTGCGAGCCTTTAAGGCTCAAGCTGATGCCATTACTTGGGAC AAGGAAACTTTGCTTACAGACCTAAGAAAAGAATTAAGATTATCAAATGAAGAACACAGGGAACTTCTGGGCCGTGTTAA TGCTGATGATGTCATACATAGAATAAGGGAGTGGAGACAGACAGGAGGCCATCAGCCTGGTGTGCTGAGTACTGGACTGG CTATTCATGATTCAATTCCGAGTCCCACAGTCTCTGCATCCCGTAAGAAGCCGAAGATAACACCCTCTGTACCATCACAA TCTTTTGGTGGGCCTTCTCCTCCATTTCACTCGCAACCCTCTGCTGCATCCCTCCAGCCATCTTCTGTTGCAAAACGTGG ATCTGTCCCTGGATCTAAGGGAAAGAAGCAAAAAGCTGGCCAAGTCTTGACAGGTGTATCTTCAAAAAAACAATATCCTT TATTAGGATCAGGTGGAAGGAATCAAGTGCCAGATAGAGTTACTTCTGGTACTGTTATGGCTGAGCTTGCCGAGGGAGTT GCATCATTTGATTCAGTGATCGGTAGGAGAGTACGAACAAGATGGCCTGATGACAATAACTTCTATGAAGCTGTTATCTC TGACTACAGTCCAATTGATGGTCGACACAATCTGGTCTATGACATGGGGAGGGCAAATGAAACATGGGAATGGGTTAATC TGTCCGAGATCTCTCCTGAAGATTTTCAGTGGGTAGGTGAGGATCCCGGTATCAATAATCATGGGGGTTTTGGTGCATCT GGTCGTGGGATGAATGGGTCTACAGGACGTGATAGTGTTCCAGGAGCTGGAAGGGGTAGAGGAGCCACGAAGGGCCAATC CAGAAAAAACTTTTTGCCATCACAGAATGGAATAGGAAAGAAGGCCCCAGATGATATACAAATACTTCACACTGAGACAC TGGTCAAAGAGGTGGAAAGGGTATTCAGTGCAAATCATCCTGATGCACTTGAAATTGAGAAAGCCAAGAAAGTATTGAAG GATCATGAGCAGTCTCTTATTGATGCACTTGAAAGAATTGCAGATCTTTCTGATGGTGAAAGTGATGAGGCTGGTCACCA TCTATCACATGCTCAATCAATGGATCGAGAATGA
Protein sequence (LotjaGi3g1v0126000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDYEPYDSSGTDDDLPPTHQNRIPRGARLAGNGRSAIGSISYPRMYGEIDMETQIHQLEQEAYSSVLRAFKAQADAITWD KETLLTDLRKELRLSNEEHRELLGRVNADDVIHRIREWRQTGGHQPGVLSTGLAIHDSIPSPTVSASRKKPKITPSVPSQ SFGGPSPPFHSQPSAASLQPSSVAKRGSVPGSKGKKQKAGQVLTGVSSKKQYPLLGSGGRNQVPDRVTSGTVMAELAEGV ASFDSVIGRRVRTRWPDDNNFYEAVISDYSPIDGRHNLVYDMGRANETWEWVNLSEISPEDFQWVGEDPGINNHGGFGAS GRGMNGSTGRDSVPGAGRGRGATKGQSRKNFLPSQNGIGKKAPDDIQILHTETLVKEVERVFSANHPDALEIEKAKKVLK DHEQSLIDALERIADLSDGESDEAGHHLSHAQSMDRE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 30 | 30 | - | – | |
| PANTHER | 1 | 434 | 434 | 1.5E-217 | – | |
| PANTHER | 1 | 434 | 434 | 1.5E-217 | ||
| Gene3D | 39 | 126 | 88 | 3.8E-16 | ||
| SUPERFAMILY | 46 | 163 | 118 | 4.58E-37 | ||
| SMART | 51 | 124 | 74 | 1.7E-36 | ||
| ProSiteProfiles | 51 | 138 | 88 | 23.082 | ||
| Pfam | 53 | 121 | 69 | 5.8E-28 | ||
| Coils | 85 | 105 | 21 | - | – | |
| MobiDBLite | 122 | 225 | 104 | - | – | |
| MobiDBLite | 136 | 186 | 51 | - | – | |
| MobiDBLite | 201 | 215 | 15 | - | – | |
| Gene3D | 244 | 292 | 49 | 2.1E-5 | – | |
| SUPERFAMILY | 245 | 285 | 41 | 4.21E-7 | – | |
| MobiDBLite | 317 | 362 | 46 | - | – | |
| Coils | 392 | 412 | 21 | - | – | |
| MobiDBLite | 417 | 437 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Defense response to fungus | Reactions triggered in response to the presence of a fungus that act to protect the cell or organism. |
Expression pattern of LotjaGi3g1v0126000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…