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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0136900 |
| Transcript ID | LotjaGi3g1v0136900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ubiquitin, putative; TAIR: AT1G31340.1 related to ubiquitin 1; Swiss-Prot: sp|Q9SHE7|RUB1_ARATH Ubiquitin-NEDD8-like protein RUB1; TrEMBL-Plants: tr|C6SXX2|C6SXX2_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0136900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:17514462..17518398) extracted from Lotus japonicus Gifu genome v1.2.
ATGCAGATCTTTGTGAAGACTTTGACTGGAAAGACCATCACCCTCGAGGTTGAGAGCAGCGACACCATCGACAACGTCAA GGCCAAGATCCAGGTTCTCTGATTTTATTTTTCAATTCAATTTTGCAAAATTAAACTGTGTTGATTTCATCGAGTTAGGG TTTGCGAGTTGATTGATTTTCTTGGTTTGTGTTGTTTGATCATGCAATTATAGGGATTATAGGTTAACAATTGAGTTATA TGTTATAGGGCACAGAGAGGGTTAGGGTTAATTTATTTTGAAGAAAAAATTATTTGTTTTGGTTTTTGTTAGGATATAAT TTGAAAAATTGAGGGATTAGTTCTCAAAAATAAGTTGTAAACCCTATCATCCATTATGTGCCCATAAAAGAAAAAGCTTT ATGTGAGTGGTGTTGATCGAACGGTTCCATTGTAGAGGATAAAGTGTAACTAACTATAATGGTTGATTGAAAAATCACTG ATTTAAGTTAATAAAATTTCAGTTATTTAACAGTTGGATGTTTGGTTTTCGGTTCAAAACAACATTTGGTACCTCGTAAA TCGGAAACATGATTTCCGATGCACAATCACCCAACGGAATGCCCTTTGTTGGATTGGGCGAAAGTACTTTCACATTCACG AAACGGAAATCCAAACAGGTGTAATACACTTTGTAGCTCCTTAATCCTCACTTCCTTACTTTAGGGTATCAAATTCTAGC TGGATAGTTATAGTTTAGTGCCTTTGGTCTCTTAGTATGTTTTAAATTGTGGTCGCGACACAGACACACAGTTGTGTCAC GGTTCTTCTTATTACGGAAAATTGTGAACGAATGTGGCTGTCGCAACTGAAATCCGGTCATGTTACAGCATCCGAAACCT CCAAAATCTTGATGTTGTGGCAACCACAATCGTGGACCTTGGTTTAGAATCACGGTCTCTCAATCCCAAGTTTAGTATTA ATAGATGTGAAAATGTAAAAGATTATGAGTCAAAAACATCGATCTTAACTGTTTTTAGCTTATGAATATGAAAATAAGTC CGAAAGTTTATGTGTGATTCAAAATCTCTTTTATTAAGTTCATTCTAAGTGTATTGAAGTACTATTCAGTGTTGTCAAAT CGCGATCGCGGACCATCGCGGTGAGCCAACAATCCACTATTTCGGCCGCTATTTAGCAGCCAATAGCAGGAATAACGCGC TATAGTGGGCAATAGCGGTGTCGCGATTAGCCAAAAATCAGCTACGCTATAGCGGCGTAGCCGCTATTTGATAACACTGG GACTATTTAAGCGCTTATTGCAATAGATAGGGCCAAACAAATTGAAATGAAGCTCTTTCAAGTGGGCCCTTTATCTGTTT TATATGATATGATGCCTGCTGAGTTGGTGTATAAATGATTGTATAATTTGTAATTTGCATAGTTAATTTGTAAGGATGTT TTTCAGAAAAGGAACTACTTCCCAAAATATTGGCTAAAACAAGCACGTGAAATTTAAAATAAAATAAAAGTATACTTTAT GGGACAGGGGTGTTTAGCACAACAATATTTATGTAATTAAGGTTGTTAAATTGTTGTGTTTTTGTTCTAGGAATTACTCT TTAGATATAGAGCATGTTGTGGGCCAATCATAGTTCTAGTGTTTGTGGTTTCTCAATCCTAGATTAGTTGAACAGATTTG AAAGCTGAAAGGTAATGATGGTAGCTAGTTGATAAATTATTGTTATAAAAAAAGCTATCATTACATGAGACGATTGTAGC TTTTGCCAATGTATCTTATGAAAATAAGCCAGAAACAGCTTATGTGGGTTTTGAGAGCTGTTTTACTAAGCTTATTCTAA CTGAAATCAAAATACTTTGTTAGCGGTTATTTCAATAAATAGGTCAAAACCTATTCATAGTGATAGCGTTTGAACATAAC ATTTGAAATTTTGTTCCATTTTTGGTGCATGTAACTTACATCAGTATTTTCTAACAATTACCAGTGGAATGTGTTTGTAG GACAAGGAAGGCATCCCTCCGGATCAGCAAAGGTTGATTTTTGCCGGTAAGCAGCTGGAAGATGGCCGCACTCTTGCTGA TTATAACATACAAAAGGAATCGACTCTTCATTCGGTCTTGAGGCTCAGGGGAGGAACTATGATTAAAGTCAAGACTCTAA CTGGGAAAGAAATTGAAATTGACATTGAGCCAACTGATACAATTGACCGGATCAAGGAACGTGTTGAAGAAAAAGAGGGA ATTCCACCTGTGCAGCAGAGGTTTTTATCTTTTGTTTTTCAACTATGCTTATTGGGCTTGGCTAATTCGTTGCTAAATGA TTTAACTCTTATATGACAATGTGCACATCTCTTTTTAGTTACAAAAACTTGTGTTTCTGATCTCATACTTGAATGTTTCT GTCCCTCTTTTTTGTTATACATATAGATAGAGAAGATACATGCTTGTAGATATCATTGATTCATCTCTTGGCTTGTTCTA AACCTTCCTTGTCTAGGGCTTTGCTTAATGGTCATGTGGTGATCCTGTAAACTACATTAACATGTAACATTGTCCTTTAT AAAGGGATAAATTTTGTCGGTACAAAATGCAATTTTTAACTTCATGAAAATTTAGTTTCAGAAGATTTTTTCTCTTTTCT ACTTTTTTCTCTCCCCATTATTTATTTATTTATTTATTTCTATTCACACACTGTAATTCATCTTGTACTAAATACCTTTG TTGTCAAGAAACAAGATTGCAATCTTAATCGGACGATCTTACATGCTCAGTGCCTCCTCTGATTGCAGTGACCGGCAATG ATGATCAGCAACTGGTTTTGACGACCCTTTGTCTGTATCTGTATTTCTAGTCCCGCCCTCATCTTTTCTGTTTCTGTCTC TCAACTGTTGTTCTTCCTTCATTTGTCTCAGTTTCCTTTGTCTCAACTCTTCATCTCTCTATCTATAACACTCAATCATC GTAACTATTTACCGTCTGTCTTTGCCTCCCTGCCTATTGTGTGTTCTTATATCCCCCCCGCTAAATCTCTCTGTCTATTA TTGATTTTGGGATGGGCACTGAATTCATGGCAAAACTATACTTTTTTTCTTTATCCTCATTTTTAATTTCATTATAAAAT ATAAAATAGTTATTAAGATATAATACAATAACTATAAAATAAAGATCTAAATAATTAAATTCTTTATTTCATAACAGATA TTAGTTAGCATATATTTTATTTTGAAATATATTTTTATTTTAGTAGGATCTAATGATTTTATTTTCGATCCTCTGATTTA CTATCTTTCACCCGCTCCTGGTTCTGAGATCTTAATCTTGATAAAATTGCTAATTAAGAAGCTCACTTTCATGACCTTGT TATAAACTCATATATCACTTGGTTTTTGTTTTGTAAATACTCTGTAAGTACTGTCATTGCTGGATACTATGTCGATGTAA ACATATGATCTTGAGATATGTTTGTAATGTTTATACATATTCATTCCTTAGTTGCTGCACCATTTGAGTGAAGTACATAT TTTGCTTCTTGTCATTGATATGTTGATACTAGTTCCTTTGAATTGCATTTTCATACTGAAATTGTTAATGTTGGATCTTG TGAACAATGCTCAATTGCTTATGCTGCTTGCCCTTGTCTTTAATTTACCTGATATTGAAGAAAGATCGTGAAATTTTATT CACTTGCTTATCGATTGAAGTGTTTGTCTTGTTTCAGATGATAATCCTTTTATTTTTCTTCCATTGTTACTGTTTCTGAA AATTGAGAGTTTTTTGTATTCTGTTGGAAACATCACAATCTTACAATTCTTTCCACTTGCTTCAGGCTCATATACGCTGG TAAACAGCTTGCTGATGACAAAACTGCTAAAGAGTACAACATTGAGGGTGGTTCTGTACTTCACTTAGTGCTTGCATTGA GGGGTGGTAGTTATTAA
CDS sequence (LotjaGi3g1v0136900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTAAAGTCAAGACTCTAACTGGGAAAGAAATTGAAATTGACATTGAGCCAACTGATACAATTGACCGGATCAAGGA ACGTGTTGAAGAAAAAGAGGGAATTCCACCTGTGCAGCAGAGGCTCATATACGCTGGTAAACAGCTTGCTGATGACAAAA CTGCTAAAGAGTACAACATTGAGGGTGGTTCTGTACTTCACTTAGTGCTTGCATTGAGGGGTGGTAGTTATTAA
Protein sequence (LotjaGi3g1v0136900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEGGSVLHLVLALRGGSY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0136900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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