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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0145300 |
| Transcript ID | LotjaGi3g1v0145300.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleotide/sugar transporter family protein; TAIR: AT3G14410.1 Nucleotide/sugar transporter family protein; Swiss-Prot: sp|Q94EI9|PT314_ARATH Probable sugar phosphate/phosphate translocator At3g14410; TrEMBL-Plants: tr|A0A1J7HFS2|A0A1J7HFS2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0145300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:19327022..19330805) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGATCCGAAGAAGGAGGGTTTCCTCACCTACGCCTATCTTCTTCTCTATATCGCTCTCTCCAGTGGCCAAATCTT CTTCAACAAGGTTAAACTCTCGCACACTCTTTGTTTCCCGGGAAAATGCGGGAAAACATTTTACCGGAAAATTATCATCG AAATGGTTCTGTGCTGATTTCGAAGCTAGGAGGATTCAAAGTCTTGTTTGTTTGTTTTTATTATGTTTTTTCATGTTACA TAATTTGTTTTTCTAACTTGTAGTCTAGGTTAAATTTGAGGCTTGTGTTGTTGGATTTTGTCAGTTGTGATTGGTAGTTG AGATTTTTGTTCAGTTGTAATGGAAACATTTTAGTTTTAACCTTTCTGTTTGTGAAATAGGATTGAGTGTGATAGAGTTG AAATTTTTTGTACATTCACCGAGTTTTTCATGATGTTTGTTTCTTGATGGTGGCATCAGCACATGTTGGTTTTTATGGTT TTATTGTCTTTTGGAGTGATCCATGCAGGAATTATTATTGTCTTCCATTTTTTTTACTAGATTTATGCTTGATTTGAGGA ATTAATTGAGAAAATGTATAAAAACTGTGTCGTTGTGTAGCTGATGCGTGTCGGATTTTCAATTTGTTATGTGCAGTGGG TTTTGTCATCTAAGGAATTTAACTTCCCTTATCCTTTGGGGTTGACTCTACTTCACATGGTCTTCTCCTCTGTTGTGTGT TTTATATTAACCAAAGTCCTAAAGGTACGTCTTTATGCTTCGTGTTGAATGTTATTGAATACGTTCCTATTATGCAATGC AGATCTTTTATCTATTTCTTTCAGGTTTTGAAGGTTGAGGAGGGAATGACTCCTGAAATGTGAGTAAGAAAGAAGATTTC TGTATGATACAGCTGATTTATAGTGTTTTATGAATGAAGTTTTTTCTTTTGTCATACTTTCTCTGGCTTTTGATGACTGA AATGTAGAAAATAAGACGCAAAATCATTGAAGATATATCCTTTTAAGAGTCTTATAATCTGTGGAAAATAAATAATCAAT ATCTAGTGTCTATTCAAATCACTTAATTCTATACAATTTATTAAGCCGGTGTTGGTACCATGTGATGAATTACAGATGAC TTTAACTTATGCAATACATGCATGCATTAGTATGGTGGTACCAATCAAACAATTCAGTGATTCATTGTTGTCGTTTCTTT TTTGGGTGCCTTTCTTTCACCAATTTCATAAGAGAAATTAAAGATAAGCTTATAATGTTAAATTAAAAGAATTGAAGTCC TGAACCTTATTTGATTTTTTTTTGCTGCTCTACTTTTATTCGCTTAACACAGGGGCTTTACACTCACTCCTCACTCTATG CGCACCTTGGCTAAGCCATTGTTTTGTTTCCTTCTGTTATGAAACATAGGTTTCACGCAGTCACTTTATGGGACTCCTAA GGCAAAGTAGGAAGGGAAGAAGGATGTTACCACTTACCTGAGTACATTGTACTTGATAATAGATGCTGAACTTAGGTAGT GTTTGACCCAACTGTTTTTGGGTTTCTCTTCTACTTAGAAGGAGAAATTGGGCTAAACTAATTTTTAAAAAAGCTCCTTA AATCTTAGTAAGGACAAAGAAAAAGTAGCTTCTCAACAAACTGCCTAGAGGAGTTTTTTATTATTTTTTTTTTATTTTAT TTTAAATTGCCGCTGTCAAGAACACCTCCTCCTTCCTTCACTCTTTCTTCTTCTCCCTCCCATCCCCTCCTCTCCTCCTT GTTTCTGGCCAAACAGAACTTAATTCGCCCATCTCCTCATATTTCTTCCTCCTGTCCTCCATGTCTGGTCGTCACTTCAG TCCTCACTGCCACTGATTCCATCTCTATCCCTTGCTTCGTGTAAGTTTTTTTTTTCTTTTCTGATCACCATCCTTCTTCC TCTTGTAGATCCAAGTCTTCCTCTTTAAGTCTTTATCGTGTAGATCTCTTCCTCCTCATCCTCTTCAAACTAGACCATTT ACATTATGTTTCCGAAACAATAACCCTAAAATACCCGCTGAAAATGCCCCAACGTTAATTTCTCAAGTGTATTTTTTGGG TTTTTGTCAATCCCATCGAATAGTGGAGAAATACTTATTGCTTTAAAAGTCGATTTCATTAAATTCTGATTATGTCTCCA AATTTCAGTTGTAATTTAATCCTACTTATTTCAGATATGCTACTTCAGTAGTGCCAATTGGGGCCATGTTTGCAATGACT CTTTGGCTGGGAAATACTGCATACTTATATATTTCCGTCGCATTTGCACAAATGTTGAAGGCAATCAGTAAGTTACAGTA AACCTTTTATTTTACTACCTATGTTCCAAAATGATTGTTGTTTAAGGTTATGCACATAGTTTAAGAACTCTTTTATTGGT AAAAAACTTGACCAAAAAACTGTTGTTTATATTTACCTACGTCATTCATTGTCCTCCAGTTTTCACAACTAACTCACTCA TTAATTAATAACAGACAACAGTAACAAAAAAGAATAGTGATTGGTCAAAATAAGAGGTGATAGGTGAGACCAAAATTATT AAATGAGAGTATAGATGGAAAAAATGCGATAAATGTCTTGAATTTCTAAAATAGCAAATAGTTTGGAATAAAGGGGAAAG CAAAAACAACAAAGGTTTTAGAATAGAGGTAGTATGTGTTATTATTAGGTATTTTTAGCCCTTTATGATATCTACCAATG GAAAGTATAATTGCTAGATGTGTCTTTTGAGATATTTAAAATAAGAATCAGATCAGTTGGTTAATCAACTTGCCTTAGGT GTTCAATATGTGGAGACTGTATAATTTTTCACATTATTTTTCCACCAAAATGGCAACTAATTGCATAATCACTCTGGTTC GTCAAATGTCTATCACAGTGCCTGTAGCTGTTTTTCTGCTTGGAGTAGCTGCGGGACTTGAGTTAATGAGCTGCAAAATG CTCTTAATCATGTCGGTGATCAGTTTTGGTGTTCTGGTTGCTTCTTACGGAGAGATAAATATAAACTGGATTGGAGTAGT ATACCAAATGGGAGGTGTCGTTGGTGAAGCTTTAAGACTTATCTTCATGGAGATTTTTGTTAAGAGGAAGGGTCTTAAGT TGAATCCTATATCCGTGATGTATTATGTTAGTCCCTGCAGGCAAGTGTTTCTTTTCATAATTTTACTTACTATTACGCTA GTTTTTAAATAAATTGAGTGTAAATTAATGCCTGTACAAATAATTTCCAACTGCAGCGCACTTTGTTTATTCCTTCCATG GATATTTCTAGAGAAGTCAAAGATGGATGACCATGGACCATGGAACTTCCCACCTGTTTTGCTTCTCCTCAATTGCCTTT GCACTTTTGCTCTGAACTTATCAGTTTTCCTTGTGATTACACATACAAGTGCTTTAACCATTCGTGTTGCTGGAGTTGTC AAGGATTGGGTGGTTGTCTTACTGTCTGCTGTTCTGTTTGCTGATACAAAGTTAACAACCATCAATTTGTTCGGTTATGG AATTGGTAAGTGTCTGCAATGCAATGTATGGCATTCTAAATTTTCCTGTCTCGTTAGACATATCCTTTGCGGAATTATAT AACTCTTCTCTTAAATGCTTGTGTACTTTTGCATATTCCACAGTCCAGGAAAATGGGTAGCCCAGTATCGGGTGTCCCCT GGATGTCTAACTGCATATTAACATATATAAACCCGGCAAACAAATACTGGCCTTTACTTTGGAAATTGTGTTAAATCTAA GATCAAATCAATTAATAGTTATGA
CDS sequence (LotjaGi3g1v0145300.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGATCCGAAGAAGGAGGGTTTCCTCACCTACGCCTATCTTCTTCTCTATATCGCTCTCTCCAGTGGCCAAATCTT CTTCAACAAGTGGGTTTTGTCATCTAAGGAATTTAACTTCCCTTATCCTTTGGGGTTGACTCTACTTCACATGGTCTTCT CCTCTGTTGTGTGTTTTATATTAACCAAAGTCCTAAAGGTTTTGAAGGTTGAGGAGGGAATGACTCCTGAAATATATGCT ACTTCAGTAGTGCCAATTGGGGCCATGTTTGCAATGACTCTTTGGCTGGGAAATACTGCATACTTATATATTTCCGTCGC ATTTGCACAAATGTTGAAGGCAATCATGCCTGTAGCTGTTTTTCTGCTTGGAGTAGCTGCGGGACTTGAGTTAATGAGCT GCAAAATGCTCTTAATCATGTCGGTGATCAGTTTTGGTGTTCTGGTTGCTTCTTACGGAGAGATAAATATAAACTGGATT GGAGTAGTATACCAAATGGGAGGTGTCGTTGGTGAAGCTTTAAGACTTATCTTCATGGAGATTTTTGTTAAGAGGAAGGG TCTTAAGTTGAATCCTATATCCGTGATCGCACTTTGTTTATTCCTTCCATGGATATTTCTAGAGAAGTCAAAGATGGATG ACCATGGACCATGGAACTTCCCACCTGTTTTGCTTCTCCTCAATTGCCTTTGCACTTTTGCTCTGAACTTATCAGTTTTC CTTGTGATTACACATACAAGTGCTTTAACCATTCGTGTTGCTGGAGTTGTCAAGGATTGGGTGGTTGTCTTACTGTCTGC TGTTCTGTTTGCTGATACAAAGTTAACAACCATCAATTTGTTCGGTTATGGAATTGTCCAGGAAAATGGGTAG
Protein sequence (LotjaGi3g1v0145300.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADPKKEGFLTYAYLLLYIALSSGQIFFNKWVLSSKEFNFPYPLGLTLLHMVFSSVVCFILTKVLKVLKVEEGMTPEIYA TSVVPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFLLGVAAGLELMSCKMLLIMSVISFGVLVASYGEININWI GVVYQMGGVVGEALRLIFMEIFVKRKGLKLNPISVIALCLFLPWIFLEKSKMDDHGPWNFPPVLLLLNCLCTFALNLSVF LVITHTSALTIRVAGVVKDWVVVLLSAVLFADTKLTTINLFGYGIVQENG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | - | – | |
| PANTHER | 5 | 286 | 282 | 7.7E-167 | – | |
| PANTHER | 5 | 286 | 282 | 7.7E-167 | – | |
| TMHMM | 9 | 28 | 20 | - | – | |
| Phobius | 9 | 28 | 20 | - | – | |
| Pfam | 14 | 285 | 272 | 1.2E-20 | ||
| Phobius | 29 | 39 | 11 | - | – | |
| Phobius | 40 | 65 | 26 | - | – | |
| TMHMM | 43 | 65 | 23 | - | – | |
| Phobius | 66 | 76 | 11 | - | – | |
| Phobius | 77 | 96 | 20 | - | – | |
| TMHMM | 78 | 97 | 20 | - | – | |
| Phobius | 97 | 101 | 5 | - | – | |
| Phobius | 102 | 129 | 28 | - | – | |
| TMHMM | 107 | 129 | 23 | - | – | |
| Phobius | 130 | 135 | 6 | - | – | |
| Phobius | 136 | 153 | 18 | - | – | |
| TMHMM | 136 | 155 | 20 | - | – | |
| Phobius | 154 | 158 | 5 | - | – | |
| Phobius | 159 | 178 | 20 | - | – | |
| TMHMM | 159 | 178 | 20 | - | – | |
| Phobius | 179 | 189 | 11 | - | – | |
| Phobius | 190 | 207 | 18 | - | – | |
| TMHMM | 190 | 207 | 18 | - | – | |
| Phobius | 208 | 218 | 11 | - | – | |
| Phobius | 219 | 242 | 24 | - | – | |
| TMHMM | 222 | 244 | 23 | - | – | |
| Phobius | 243 | 248 | 6 | - | – | |
| Phobius | 249 | 271 | 23 | - | – | |
| TMHMM | 249 | 271 | 23 | - | – | |
| Phobius | 272 | 290 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0145300.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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