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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0217100 |
| Transcript ID | LotjaGi3g1v0217100.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF674 family protein; TAIR: AT5G01140.1 hypothetical protein (DUF674); Swiss-Prot: sp|O73948|RADA_METVO DNA repair and recombination protein RadA; TrEMBL-Plants: tr|A0A151RAJ8|A0A151RAJ8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0217100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:32680159..32688662) extracted from Lotus japonicus Gifu genome v1.2.
GCATCTTCTTCAACTTGGCTACAAGAACTTCCACAAGCTGATAGAAATGTCTCCAAGTGTTGGCATGAGTGAGGTAATAT TTCTTTTGATTCATTTGACATGCTAAAGATGGTTTATTACGATAGGAAGCAATTTTATACCAAACAAAAACACTAGTATC TAAATAAGGGAACACGATATTTATCCTAACATACATCTTCCCAGAATTAAGGTTTGCCATACATGTGACAACGTCTAAGA AACAGAACATTTTAGAATAGAAATAAAAGGAATAACATAACATTCAAAAGATAAATATATACAGGTCACATGGACTAAAT AGGCCACCACAGTCTATAGCATACCTCCGGGACCATAGGTCAATTGCATATGCACTTACAGGTCGCCCATCAACATAGTC CTCACATGGACAACGAGAATCAAACACACAACATTTCGAGGGGAATTGGTCTGTCATTACTCATTACCAACGGAAGTTAA CATGTGTTTGATAAAATAAGAGTTTTATGAAAACAGTATTATAAACCTTAGGTTCTTGTTTGAAAGATCATTGAAAACAA TATAAGAAATTAAATATGAAAGTTTCCTGGATTGATAACTATTGTGCCTATACCTCTATTTTTCTTTTCAGATTCTAGGC TTGCTAAAGCAAGCATTAACCTCCAAATCTCCTCTCAGTGATGTATTCTTGGCAAATGAAGAATCTAAGAAAATGACCAC TTTCTCACCAAAACTTGGACCCAAAATTGTAAAGTGCATTCATAACTCTGTTATAAACCTTAAGGTAACCGTGAGAAAAT CAAGGAAGAAGATACTGTACGCTGAAACTGAGGGAGATTTTGTTGACTTTCTATTCAGTTTCCTCACAACACCTCTAGGG TCAATTCTAAAGCTATTGAATGGAAATTGTTCTATGGGATGTGTGGATAACTTGTACAAAAGTGTGAAGGATCTAAAGGA TCTCAATCCTTCATTGTTCACAAGACCTCCAGGCACTGATCCGTTATTGGATCCACCGGTTGCTTCTCAATTTGGTTGTA GGAGGCAACCACTAAACCATTTTGAAGATGAAAGTCCTAGTTACTGGTATGGCACTGGTGTGATTAAAAATAATATCTGC TATGCAAACAAGAATGGAGTAATTTCAAAGAAGAAAAATCTGATCCACAATCCAGAAGACATGAAACTTTTTGAGCCAAG GTCCCCTGATGGCACAAGAGAATTCGCTGAGGGATTTGTGAGGAGGCCATCACTATTTGTTGTGTGGGATGATCTTCAAG TTACACATTTAGCAAAAACATCTAGCATTTCATTTCTGCAAAAGCTGAATGTACCATTGGATGATTTAGAGGAGCATGTA GTGAGCATTGGGGAGACAGAGGTAACTCTCCATTTTTCACTAATTTTAATTATCTTATGAATCAAATCAAATACTTGAAA ATTTAATGATTGACAATAGGTTTAATGAGAATTAGATGACTAATTTCATTGTGTTAACATTATCAGGCACTAAACTTGTT GGGAGCTTCTTTGACATCCAAAGCTGCTTTGACAGATGGCCTGTTCTACCTCCTGAAGAAGCCAAAGGAAGAATCTACAG CTTGAAGTTTTTTTTAGATGTTGATAAGGGGCTGAATAATAGAGCAATCCTGCAAATGTTTGATTTCAGACATATGTGCT ACATTTGAGTGAACTGAAATGTATGGTGATGTGATTTTTAAACTCCCTTGTTAAACAATCAGTTTGTGTGCTATGTAAGT GCTATTAGGATTTAGGACAACACAGTCTTGAAATTGATTGTTGCTCATGAGATGAATTGAGAAATCTGGTTAAGGAATTG AAATTTCAGGTGGTGTTGTTGCCTTGTTGGGATTACAAAGAAAAAAGTTAATGATAAGAAGAAGAAAAAAGCATAAGGGC ATGATTTCAAAGTACTGCATGAACACTACAACCAGTAAGTGCACCTAGGATATGAGGAACATGATAAACATTAAAACATA AATACAACATAGGATAACTAATTCATCTTATTGATTAGGTTGTTGATAGAACCCTCGTGTTCCCTGCATCTCCACCATCC TCGTATAAGGTTTTTGATTCTTTCAATTTGTTAGAGTCCCACATTGGCTAGAGATGTGGCCAAGCAATTGCTTATATATG GTTGTGCAAACCTTAACTCTTGAGCTAGCTTTTGGGTTAAGTTAGGCCTCCTTCATGGTATCAGAGCCAATGGTTATCTG ACCATGGGCCTGGGCCCCTATCCTAGATCCATTTGTTGTGGAGACCTCCCATATTTGGGCCACCCGTTTCATTCCACGCT CCAGATGTTCTACACTGGGCGTGAGGGGGTGTGTTAGAGTCCCACATTGGCTAGAGATGTGGTCAAGCAATTGCTTATAT ATGGTTGTGCAAACCTTAACTCTTGAGCTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATACAATTCATCATC TGATGGTTGGTTGAGTTGAAAGGGTGTTAGAACAGCAACCTGTATACCAGAAGAATACCAGAGAACACTAGAGGGAGAAA CAGACAATCACAAGCAATGGAAAACACAAGATACTTGTTCCCGTAGTTCGGCCAATTTACCTACCTCTGCCACTACAGAG CAACTGTAACTCCTTTTGATTGATTAGGTTTCAGATCCAATCTCACATCTAGGTTTACAGTGTTACAAGCCTTTATGTAG GAATACTAATAATCCAGATTACATAAATACTCCTAGATAACCCGTGGTCATTCCCGTAACATTCTAGCAACCATATATTG CCTCATGTGCATTATATGGAGACCATCCTTGGTCTCAAGTACATTTGATCACTATGAGCCATACTCAACAAAGGGCCACA TAAATCTGACAACTTGGTCGAATCGGGGACCAACCTTGTCAATTTGATACACCATATCTTCAATGCATACAATACCTAAC ATGCTATTTGTACCTAAGGATTAATGTCTCCTATTGTCACCTGAAAAACCTCAACCCTGTTGGGAAATAACACAGCTGAA GAAGTAAAAATAAATCAGGAGCGCAATCAACAACATAAGAATATAACGTGGAAACTCCAAAACCGGGGAAAATACCACGG CCGTTGTCAAAACCGACAACGAGAGAATAAACACTATGTGAAAATTATTACAACACATAGACTTCACTCTCAACCACCCC AGTACACCCACACTCTCCAAAGTAAATATTTGAACTACATCTCACAATACTCTAAAACAAGAGCATAAGAGAAAAAAAGA AAACACAAATATAAACTTAAAGTGTTTTCAGGTGCTACATCTTTGGTGTTTTGGTGTGTTGAAACAAAGAGCTTGAGATC CCTATATATAGTCATGGACCCTCCCACCCCTCACTAATCTAAGCGATGTGGGACTTCTCCAAGATGCATAACTTGATCTT TTTTCTCCTTCATTAGCAATGTGGGACTTACATTGCAATCAACCCCAACAATCTCCACCTTGATTGTCATGGTCTTCAAT CTTCATTGTCTATACCGACAATCATTGTCTTCACCGACAAACATAATTCGCATTGTCTATATACCGACAAATTAAATTAT CATACTCCACCATAAAAGAGTACACTACACTTGAAACTAAACCATCCCAAGAATTTTCTTCACTTGGAACTAAACCATTC CAAGAATTTCCACATGCCGAAACCTTGCTGAAAATCTATGGTGGAACTTCCATGTTGGCTTTCTCCGGAAGTTCATCAGC CATCGACATAACCACGTACCTTGCATCAATGCCAACCAATGCCCGCACGCTATCACCACACACCTTGCATCTATATCAAC CAATGCCCGTGTGCCACCTGAACAATTTCATGCCCAGAACGCCTTGTGTAATCATGATTGCATCAACTCCTCCATCACAG CATCATCACAGCTGCAGCTGCAGATCGACTGTAAACCGTGCACCAGGTTGGTTCCCAGAAAAGAGAGGTGTCTTTCCAGA ACCTCCCAAAACAACACTTCACAATGTCACACTTCTTCAGCACCTTCGCAATACCACACAAAGTGATATCCATCGAACCG GAAGCTCTGATACCACTTGTTGGGGAGAGTCATGGCGAGGACCCATGGGGCAAGGCTGAGGGAAACACCAAGGAGATCCT GGACACCACATCTTAACCCAAAACCTTAAGGCATTAGGTTTATGGGTCACATCTCTTATAAACTCTCCCTCTCACCTTGA CTTCTCCGATGTGAGACTTGACTCCAACACTTGATTCCAACAATCTCCCCCTCAAGTGTGAGTCTCTCAACCACATCACC CATGGTCCTCCCGTCTGCGGAAGCTATCCACCTTGATTGTAATGACCAAAATATCATAAATAATACATTAAAATGCATGC AAATAAACTAGAAAAATAGCTATAAATCTCGGGTCATCACACCCTTATACTCAACGGCAGCTTGTCGTCAAGCGAAAACT TACGAAAGCTTGTCCTCAGGCACAAAATAAATCAATTCCAAATCAATTGCCTGCATTTTCAAAACATAGGATACACAACC AACAAAGAAAGATTAGTTCATGAGCATACTAGTTAAGAGAAACAAGGAAAACAGACCAGGGAAATTGAAATCAATAGGAT AGTGAGACACAAAGTTCACATCAAAACTCACAACAACAATCACCAATTATTTAGTGCATCTAACAGTACAAACATTATGC TTTAGTTCTGATAATCAATCAAATCTATGTCAGACAGTGTCATGCTATGCAACAAGAAATAGATTCACACAAGTTGTAAC TTGACCAAGGTGTAACTTCAGGTAGGATATGAAAAAGATAATACACGACTACACACACAGACAACTAAGTCATCCATTTC TTCTTTCACTCCGGAGCATTCATTTAAAGCACTATCCTTTCTCTTTTCTCTCCTCTTTTTAGGTGCAAACTTTTCATTTT TAGCCACCGGCGACCACCGCCTTTGTTCCGGCGTAACATGATGCCGGCGACCCTCTACACCCAGCTGCAGTGCTCTCTGA AGCAACAACTGCCGCTCTTAAGGAGGAAGCAACGGCGAAGCGTGCCACTGGAGGCTATCACCAAGCTCCAACTCCTCCTC TCGAGCCACCAGCGAGCGGCTCCAACCCCGGTGTGAAGGCCACCGCAGGTATTAACCATGGTGGTGAAGAATCTTTATTT GACCCATCAATGGAAATGGAGCTAGATGTGGTTTTGGAGAAGACAAGGCTGAAGAAGAAAGATAATGCTTTGAACAATTC ATCTACATCTACTGTATATGAAAATGTGCCTTTAGATTTGCATTTAAAGACCCATGTGGGTCAGAGTACTTTGACAAGCA AAGTCATTGACTCTTCTCTCAATACACAGCCATACCATGTGCCAACGGCAGACTCCCTTCCTCAAGACCCATTCCCTCCA CTTGTTTCTCACGCGGGACCCATTGGCATAAAAGACAAGACCCAAGTTGAGCAAAGTAGCACTCCTAGTCCCACCCCAAC GTCACAATTCAATGACCCATTCAAGATTCAAGATACAATCTGAAAATCCTATCCACTACTCTCCAGGGCCAATTAATCTT CCACGTGGGACTCCTCAAATTGAAGACATTCCAACGTCTTCTTCTACAAGCCTTGAGGACAAGGCTTTGTCTCAAGGGAA TGGAATTGGTAGCTGTATTAGGCCGGTCCACCACAAATACAAACAAAAGAGGAAATCCAAGAGAAAGAAAAAGAAACCTG ATCACTTGAAGGATTTTATTTTAAAGTAATAGAATCAAAATAGCCAATGGGCCTTATCTACTAAGAGTACTTAAAAGAAA TAACATTGGACTAAGCCCAATATATGGGCATTCTCTGTAGGTTTTTATTTCCAAGCTATAAGTATTGTACTGTTCTTTAT TTTACAGTTATCAAAGAAAACGGCTTCAGCCAAATTTACTTGCCTTTATCGTAATTTTTCTTCTTGCTGCTAGGTTAGCT CTGCTAGGGTTCTTGGTGAGATTCTTGAGTCTTACCATTCTTCCCCTTTTGTTTTTTTTTTTAATTCTGCATGGCTTCTA AGCAAGAACCAAATTTCCCTCTGAGACTGTTGGTGGACAAAGAAAGAAACTGTATAGTTCTAGCTGAAGCAAACCGTGAC TTCGTAGACATTTTGTTCAGCTTTCTCACCCTTCCATTGGGAACTCTCATTCGCCTTGTCTCAAAGAAGAAGCTACATCA TCCATCAGATGAGATTGGTTGCACCAACAATCTGTACCAAAGTGTTGAAAATTTTGGTTCTGAGGTTTTCTGGAACCATA TCTGCAAGACAATGTTGCTTTCTCCGCGCAATCCTTGTGAGGCCCTTTGCCAGAAGCTGAAGCTGAAGATTGATGATGCA GAGCCCACTAAGTACTTCATGTGTGGTAGTTGTCGTGTGGGGAGTGATGTGTTGTTGAGTACTTTTTTAGGGGCGAGTTG TTGTTCATGTGGGGAATTGATGGACAAAGAAATGAAGCTGCATGGGGATTCAACTGAAGAGAATCATGGTCATGGAGGTG GTGTTTTTGTTAAGGCGGAAACTATGTATTTAATCTTTGATGATTTGAAAGTGGTTCAAAGTTCTCCTGGAAACTCTGTT CGGCATCTTCTTCAACTTGGCTACAAGAACTTCCACAAGCTGATAGAAATGTCTCCAAGTGTTGGCATGAGTGAGGTAAT ATTTCTTTTGATTCATTTGACATGCTAAAGATGGTTTATTACGATAGGAAGCAATTTTATACCAAACAAAACCACTAGTA TCTAAATAAGGGAACACAATATTTATCCTAACATACATCTTCCCAGAATTAAGGTTTGCCATACATGTGACAACGTCTAA GAAACAGAACATTTTTGAATAGAAATAAAAGGAATAACATAACATTCAAAAGATAAATATATACAGGTCACATGGACTAA ATAGGCCACCACAGTCTATAGCATACCTCCGGGACCATAGGTCAATTGCATATGCACTTACAGGTCGCCCATCAACATAG TCCTCACATGGACAACGAGAATCAAACACACAACATTTCGAGGGGAAATGGTCTGTCATTACTCATTACCAACGGAAGTT AACATGTGTTTGATAAAATAAGAGTTTTATGAAAACAGTATTATAAACCTTAGGTTCTTGTTTGAAAGATCATTGAAAAC AATATAAGAAATTAAATATGAAAGTTTCCTTGATTGATAACTATTGTGCCTATACCTCTATTTTTCTTTTCAGATTCTAG ACTTGCTAAAGCAAGCATTAACCTCCAAATCTCCTCTCAGTGATGTATTCTTGGCAAATGAAGAATCTAAGAAAATGACC ACTTTCTCACCAAAACTTGGACCCAAAATTGTAAAGTGCATTCATAACTCTGTTATAAACCTTAAGGTAACCGTGGGAAA ATCAAGGAAGAAGATACTGTACGCTGAAACTGAGGGAGATTTTGTTGACTTTCTATTCAGTTTCCTCACAACACCTCTAG GGTCAATTCTAAAGCTATTGAATGGAAATTGTTCTATGGGATGTGTGGATAACTTGTACAAAAGTGTGAAGGATCTGAAG GATCTCAATCCTTCATTGTTCACAAGACCTCCAGGCACTGATCCGTTATTGGATCCACCGGTTGCTTCTCAATTTGGTTG TTGGAGGCAACCACTAAACCTTTTTGAAGATGAAACTCCTAGTTACTGGTATGGCACTGGTGTGATTAAAAATAATATCT GCTATACAAGCAAGAATGGAGTAATTTCAAAGAAGAAAAATCTGATCCACAATCCAGTAGACATGAAACTTTTTGAGCCA AGGTCCCCTGATGGCACAAGAGAATTCGCTGAGGGATTTGTGAGGAGGCCATCACTATTTGTTGTGTGGGATGATCTTCA AGTTACACATTTAGCAAAAACATCTAGCATTTCATTTCTGCAAAAGCTGAATGTACCATTGGATGATTTAGAGGAGCATG TAGTGAGCATTGGGGAGACAGAGGTAACTCTCCATTTTTCACTAATTTTAATTATCTTATGAATCAAATCAAATACTTGA AAATTTAATGATTGACAATAAGTTTAATGAGAATTAGATGACTAATTTCATTGTGTTAACATTATCAGGGACTAAACTTG TTGGGAGCTTCTTTGACATCCAAAGCTGCTTTGACAGATGGCCTGTTTTACCTCCTGAAGAAGCCAAAGGAAGAATCTAC AGCTTGAAGTTTTTTTTAGATGTTGATAAGGGGCTGAATAATAGAGCAATCCTGCAAATGTTTGATTTCAGACATATGTG CTACATTTGAGTGAACTGAAATGTATGGTGATGTGATTTTTAAACTCCCTTGTTAAACAATCAGTTTGTGTGCTATGTAA GTGCTATTAGGATTTAGGACAACACAGTCTTGAAATTGATTGTTGCTCATGAGATGAATTGAGAAATCTGGTTAAGGAAT TGAAATTTCAGGTGGTGTTGTTGC
CDS sequence (LotjaGi3g1v0217100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCCAAGTGTTGGCATGAGTGAGATTCTAGACTTGCTAAAGCAAGCATTAACCTCCAAATCTCCTCTCAGTGATGT ATTCTTGGCAAATGAAGAATCTAAGAAAATGACCACTTTCTCACCAAAACTTGGACCCAAAATTGTAAAGTGCATTCATA ACTCTGTTATAAACCTTAAGGTAACCGTGGGAAAATCAAGGAAGAAGATACTGTACGCTGAAACTGAGGGAGATTTTGTT GACTTTCTATTCAGTTTCCTCACAACACCTCTAGGGTCAATTCTAAAGCTATTGAATGGAAATTGTTCTATGGGATGTGT GGATAACTTGTACAAAAGTGTGAAGGATCTGAAGGATCTCAATCCTTCATTGTTCACAAGACCTCCAGGCACTGATCCGT TATTGGATCCACCGGTTGCTTCTCAATTTGGTTGTTGGAGGCAACCACTAAACCTTTTTGAAGATGAAACTCCTAGTTAC TGGTATGGCACTGGTGTGATTAAAAATAATATCTGCTATACAAGCAAGAATGGAGTAATTTCAAAGAAGAAAAATCTGAT CCACAATCCAGTAGACATGAAACTTTTTGAGCCAAGGTCCCCTGATGGCACAAGAGAATTCGCTGAGGGATTTGTGAGGA GGCCATCACTATTTGTTGTGTGGGATGATCTTCAAGTTACACATTTAGCAAAAACATCTAGCATTTCATTTCTGCAAAAG CTGAATGTACCATTGGATGATTTAGAGGAGCATGTAGTGAGCATTGGGGAGACAGAGGGACTAAACTTGTTGGGAGCTTC TTTGACATCCAAAGCTGCTTTGACAGATGGCCTGTTTTACCTCCTGAAGAAGCCAAAGGAAGAATCTACAGCTTGA
Protein sequence (LotjaGi3g1v0217100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSPSVGMSEILDLLKQALTSKSPLSDVFLANEESKKMTTFSPKLGPKIVKCIHNSVINLKVTVGKSRKKILYAETEGDFV DFLFSFLTTPLGSILKLLNGNCSMGCVDNLYKSVKDLKDLNPSLFTRPPGTDPLLDPPVASQFGCWRQPLNLFEDETPSY WYGTGVIKNNICYTSKNGVISKKKNLIHNPVDMKLFEPRSPDGTREFAEGFVRRPSLFVVWDDLQVTHLAKTSSISFLQK LNVPLDDLEEHVVSIGETEGLNLLGASLTSKAALTDGLFYLLKKPKEESTA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 2 | 257 | 256 | 2.1E-67 | ||
| PANTHER | 3 | 287 | 285 | 2.1E-63 | – | |
| PANTHER | 3 | 287 | 285 | 2.1E-63 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0217100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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