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LotjaGi3g1v0261200.2

Overview

Field Value
Gene ID LotjaGi3g1v0261200
Transcript ID LotjaGi3g1v0261200.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Non specific phospholipase C; TAIR: AT3G03530.1 non-specific phospholipase C4; Swiss-Prot: sp|Q9SRQ7|NPC4_ARATH Non-specific phospholipase C4; TrEMBL-Plants: tr|I1JMB7|I1JMB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0261200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:47751292..47754062) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCTTCAGATTCTAGCACCACTAAAATCTACCCCATCAAAACCATCGTTGTTCTGGTTCAAGAGAACCGTTCCTTTGA CCATATGCTAGGTTGGATGAAGTCCCTCAACCCAGAAATCAATGGTGTCACCGGTTCTGAGTCGAACCCGGTTTCTACAT CAGACCCCAACTCGAACCGGATTAAATTTGGTGACCGGTCTATCTATGTTGACCCAGATCCCGGCCACTCAATCCAAGAC ATCTACGAGCAAATCTTCGGAGAGCCGTGGAGTGTGGCCTCGGAGGCAAAGAAGCTGCCGCCAACAATGGAAGGCTTTGC TCAAAACGCGTCGAGGCAAGAGAAGCCTAAGAAGAATACCACGGTGAAAATGACCGAGGCGGTTATGAATGGGTTCAAAC CGGAATTGGTGCCGGTCAGCAAAGAGTTAATCAAAGAGTTTGCGGTTTGTGACCGTTGGTTTGCTTCGGTTCCTGCATCG ACTCAACCGAACCGGCTTTATGTGCACTCTGCGACGTCGCATGGGTTGAGCAGCAATGACACGAATAAGCTTATTGGAGG GTTGCCCCAGAAAACCATATTCGATTCCCTTCAAGAAAATGGGTTCAGTTTTGGGATCTATTATCAACAACTACCATCCA CTCTTTTCTACAGGTTGGTTGATATGATCACTAGCTTACCTTATTTTTTTTGAATAAGATCACTTACCTTATTAGTTGTC GAGTAAAATTAATCATGCATATATATATATATATATATATATATATATATATATAAAAGTATTTGTTTTCGCGAAAATAC AGATTTAATTGGTATATATATAGGACTCACTTTTCGATCATGCTTAATTAGTTTATGCCATGTTCAAAATTTTTATGCTT ATCTTGATATAATTTTTTATTTTTTATCTCATCAATTTCAGACAGTATTGCAAAAAATTAACATATAATTAGTATGTTCC TCGTATATATTTATTTTTTTTGGTTGACAAATAATTCTAATTATTATGACTTTCAGGAGTCTTAGGAAATTGAAAAACAT AGATAACTTCCTTCCGTTTGACCTAACATTCAAGAAGCACTGTCAAGAAGGGAAGCTGCCAAACTATGTGGTGGTTGAAC AAAGATATAACGACCTGTTATTAGCACCAGGGAATGACGATCATCCATCTCATGATGTTGCAGAAGGACAAAAGTTTATA AAAGAAGTTTATGAAGCTCTTAGAGGTAGCCCACAATGGAATGAGATCTTGTTTGTGATCACATACGACGAGCATGGAGG ATTCTACGATCATGTGCCTACACCCGTGGAAGGAGTGCCAAGTCCAGATGACATTGTGGGTCCTGATCCATTCAAGTTCA TATTTGATAGGCTTGGGGTTAGAGTTCCAGCTATCATTATTTCTCCATGGATTGAACAAGGAAAAGGTAAGAATCAAATT CAATTAATGGAAAATATAGTCCAGTAATTATTTATACAAGATTTGTTTTTACTTTATTTTAATTTGATATCTTAACATAA ACATATTAATGAATTTTTTTTAGTAATTTATTCATATCTTAAGACCCTAACATTACTACTTAATCATTGATCAAATATAT GTATACAGTTTTGCACGAGCCTTCTGGACCATTCCCGACATCACAATATGAGCATTCTTCTATTCCAGCAACCGTTAAGA AAATATTCAATCTACCCAAATTTTTGACAAAGCGAGATGCATGGGCTGGAACATTTGAGGGACTTTTAACTCGAAGCAGC CCACGAACTGATTGTCCAGGTATCTCTTGTTTATGCTTTCGTTTCAAGGATGCAGTAAATCATTTTAAAAAGTGGTCCAC AGATGAACCACCATATTTGACTGTTAGATATATTTATTTAATATTATATCTAACGGTTACCACCATATTTGACTGTTAGA TATATTTATTTAATATTATATCTAACGGTTAGATATGTTGATCCAAGTCAATAGCTTTTAAAATAGTTCACCTTATCCAT TTTCTTTTTTTCAGCTATAATAATAATAATAATAATTATTATTATTATTATTATTATTATTCTGAATTTAAAAACTGTTC TTAGAAATAACTTTTAAAATCCCTTTTTCAAAAAAAGAAAAAAAAAACTGTTTTTACCAGCTATAATTTATGACTGAGCA CACGTTTTTAAAAAATGATAAAACTTTGATTTGAAAACTAAAATCAGAAAGAGGAAACATATTTTGAGATATTTTGGTTT TTCAATTTTAAAATTGAAAAAGAAACCAATTTTTAAAAAAATAGTTTTTACCATGATGAAATTTGTTTTGTTTTGGCTTT TAAAAACTGAAAATAGTTTTATAAAACAGTAATGAAACAGACCCTTGAATTACAATGGATAGAATGTCCCATCAATTCGT TAACCATTTAAGTTTCCAAAATTGCAGAGACATTGCCTAACCCAATAAAACTACGGGAGGCAGCAGCTAATGAAGAGGCT AAGTTGAGTGAGTTTCAGGAAGAGTTGGTACAATTGGCAGCTACTCTAAATGGGGATCATAGAAAGAGTATATATCCCAA CAAGCTAACTGAGAACATGAGTGTTTCAGACGCGGCTAAATATGTTGAAGATGCATTTAAGACATTCTTGTATGAGTGTG AGAAAGCAAGGCAAAATGGAGCTGATGAATCTGAAATTGTAGAATGTGCCGATTGTGCTAGCGCACATGCACCATCCAAT TCCAGAAACTTCCTTAACAAGATGTTGTCTTGTATAACGTGTAATCGTTGA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0261200.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTCAGATTCTAGCACCACTAAAATCTACCCCATCAAAACCATCGTTGTTCTGGTTCAAGAGAACCGTTCCTTTGA CCATATGCTAGGTTGGATGAAGTCCCTCAACCCAGAAATCAATGGTGTCACCGGTTCTGAGTCGAACCCGGTTTCTACAT CAGACCCCAACTCGAACCGGATTAAATTTGGTGACCGGTCTATCTATGTTGACCCAGATCCCGGCCACTCAATCCAAGAC ATCTACGAGCAAATCTTCGGAGAGCCGTGGAGTGTGGCCTCGGAGGCAAAGAAGCTGCCGCCAACAATGGAAGGCTTTGC TCAAAACGCGTCGAGGCAAGAGAAGCCTAAGAAGAATACCACGGTGAAAATGACCGAGGCGGTTATGAATGGGTTCAAAC CGGAATTGGTGCCGGTCAGCAAAGAGTTAATCAAAGAGTTTGCGGTTTGTGACCGTTGGTTTGCTTCGGTTCCTGCATCG ACTCAACCGAACCGGCTTTATGTGCACTCTGCGACGTCGCATGGGTTGAGCAGCAATGACACGAATAAGCTTATTGGAGG GTTGCCCCAGAAAACCATATTCGATTCCCTTCAAGAAAATGGGTTCAGTTTTGGGATCTATTATCAACAACTACCATCCA CTCTTTTCTACAGGAGTCTTAGGAAATTGAAAAACATAGATAACTTCCTTCCGTTTGACCTAACATTCAAGAAGCACTGT CAAGAAGGGAAGCTGCCAAACTATGTGGTGGTTGAACAAAGATATAACGACCTGTTATTAGCACCAGGGAATGACGATCA TCCATCTCATGATGTTGCAGAAGGACAAAAGTTTATAAAAGAAGTTTATGAAGCTCTTAGAGGTAGCCCACAATGGAATG AGATCTTGTTTGTGATCACATACGACGAGCATGGAGGATTCTACGATCATGTGCCTACACCCGTGGAAGGAGTGCCAAGT CCAGATGACATTGTGGGTCCTGATCCATTCAAGTTCATATTTGATAGGCTTGGGGTTAGAGTTCCAGCTATCATTATTTC TCCATGGATTGAACAAGGAAAAGAGACATTGCCTAACCCAATAAAACTACGGGAGGCAGCAGCTAATGAAGAGGCTAAGT TGAGTGAGTTTCAGGAAGAGTTGGTACAATTGGCAGCTACTCTAAATGGGGATCATAGAAAGAGTATATATCCCAACAAG CTAACTGAGAACATGAGTGTTTCAGACGCGGCTAAATATGTTGAAGATGCATTTAAGACATTCTTGTATGAGTGTGAGAA AGCAAGGCAAAATGGAGCTGATGAATCTGAAATTGTAGAATGTGCCGATTGTGCTAGCGCACATGCACCATCCAATTCCA GAAACTTCCTTAACAAGATGTTGTCTTGTATAACGTGTAATCGTTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0261200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASDSSTTKIYPIKTIVVLVQENRSFDHMLGWMKSLNPEINGVTGSESNPVSTSDPNSNRIKFGDRSIYVDPDPGHSIQD IYEQIFGEPWSVASEAKKLPPTMEGFAQNASRQEKPKKNTTVKMTEAVMNGFKPELVPVSKELIKEFAVCDRWFASVPAS TQPNRLYVHSATSHGLSSNDTNKLIGGLPQKTIFDSLQENGFSFGIYYQQLPSTLFYRSLRKLKNIDNFLPFDLTFKKHC QEGKLPNYVVVEQRYNDLLLAPGNDDHPSHDVAEGQKFIKEVYEALRGSPQWNEILFVITYDEHGGFYDHVPTPVEGVPS PDDIVGPDPFKFIFDRLGVRVPAIIISPWIEQGKETLPNPIKLREAAANEEAKLSEFQEELVQLAATLNGDHRKSIYPNK LTENMSVSDAAKYVEDAFKTFLYECEKARQNGADESEIVECADCASAHAPSNSRNFLNKMLSCITCNR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.720.10
2 190 189 2.9E-16
IPR017850
PANTHER
PTHR31956:SF28
5 354 350 2.0E-229 –
PANTHER
PTHR31956
5 354 350 2.0E-229
IPR007312
Pfam
PF04185
13 354 342 2.1E-96
IPR007312
Gene3D
G3DSA:3.40.720.10
246 357 112 3.0E-27
IPR017850
PANTHER
PTHR31956:SF28
355 467 113 2.0E-229 –
PANTHER
PTHR31956
355 467 113 2.0E-229
IPR007312
Coils
Coil
367 387 21 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0016788
Molecular function Hydrolase activity, acting on ester bonds Catalysis of the hydrolysis of any ester bond.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0261200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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