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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR017850
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We have found 44 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.078s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0198969.1
n.a. PREDICTED: non-hemolytic phospholipase C-like [Glycine max] gi|356504452|ref|XP_003521010.1| chr0 97402903 97409532 -
2 domain predictions
1 GO term
Lj0g3v0241399.1
n.a. PREDICTED: phospholipase C 4-like [Glycine max] gi|356577337|ref|XP_003556783.1| chr0 125208318 125213503 +
2 domain predictions
1 GO term
Lj0g3v0277739.1
n.a. PREDICTED: GPI ethanolamine phosphate transferase 3-like [Glycine max] gi|356545808|ref|XP_003541326.1| chr0 144170941 144177724 +
2 domain predictions
1 GO term
Lj0g3v0277739.2
n.a. PREDICTED: GPI ethanolamine phosphate transferase 3-like [Glycine max] gi|356545808|ref|XP_003541326.1| chr0 144170941 144177724 +
2 domain predictions
1 GO term
Lj0g3v0277739.3
n.a. PREDICTED: GPI ethanolamine phosphate transferase 3-like [Glycine max] gi|356545808|ref|XP_003541326.1| chr0 144170941 144175934 +
2 domain predictions
1 GO term
Lj1g3v1500500.1
n.a. PREDICTED: phospholipase C 3-like [Glycine max] gi|356508823|ref|XP_003523153.1| chr1 17910810 17913771 +
2 domain predictions
1 GO term
Lj1g3v2570560.1
n.a. PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase-like [Glycine max] gi|356568270|ref|XP_003552336.1| chr1 29484561 29491002 -
2 domain predictions
1 GO term
Lj1g3v3104070.1
n.a. PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1-like [Glycine max] gi|356568873|ref|XP_003552632.1| chr1 35333331 35337496 +
2 domain predictions
1 GO term
Lj2g3v0912050.1
n.a. Ectonucleotide pyrophosphatase/phosphodiesterase family member [Medicago truncatula] gi|357501305|ref|XP_003620941.1| chr2 13994471 13998495 -
2 domain predictions
1 GO term
Lj2g3v0912060.1
n.a. PREDICTED: ectonucleotide pyrophosphatase/phosphodiesterase family member 3 [Vitis vinifera] gi|225444938|ref|XP_002282308.1| chr2 13996710 14001783 -
2 domain predictions
1 GO term
Lj2g3v0912060.2
n.a. Ectonucleotide pyrophosphatase/phosphodiesterase family member [Medicago truncatula] gi|357501305|ref|XP_003620941.1| chr2 13996710 14002950 -
2 domain predictions
1 GO term
Lj2g3v0913110.1
n.a. nucleotide pyrophosphatase-like protein [Spinacia oleracea] gi|12081942|dbj|BAB20681.1| chr2 14034429 14036143 -
2 domain predictions
1 GO term
Lj2g3v1453920.2
n.a. PREDICTED: GPI ethanolamine phosphate transferase 2-like [Glycine max] gi|356497706|ref|XP_003517700.1| chr2 22870164 22875056 -
2 domain predictions
1 GO term
Lj3g3v0461640.1
n.a. PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase-like [Glycine max] gi|356568270|ref|XP_003552336.1| chr3 4906240 4911601 -
2 domain predictions
1 GO term
Lj4g3v3015220.1
n.a. PREDICTED: ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like [Glycine max] gi|356511413|ref|XP_003524421.1| chr4 40388291 40392262 +
2 domain predictions
1 GO term
Lj6g3v0964670.1
n.a. PREDICTED: phospholipase C 4-like [Glycine max] gi|356577337|ref|XP_003556783.1| chr6 10870449 10875847 -
2 domain predictions
1 GO term
LotjaGi1g1v0337700.1
n.a. Non specific phospholipase C; TAIR: AT3G48610.1 non-specific phospholipase C6; Swiss-Prot: sp|Q8H965|NPC6_ARATH Non-specific phospholipase C6; TrEMBL-Plants: tr|A0A151TRC4|A0A151TRC4_CAJCA Phospholipase C 3; Found in the gene: LotjaGi1g1v0337700 LjG1.1_chr1 79810873 79814391 +
3 domain predictions
1 GO term
LotjaGi1g1v0337700.2
n.a. Non specific phospholipase C; TAIR: AT3G48610.1 non-specific phospholipase C6; Swiss-Prot: sp|Q8H965|NPC6_ARATH Non-specific phospholipase C6; TrEMBL-Plants: tr|A0A151TRC4|A0A151TRC4_CAJCA Phospholipase C 3; Found in the gene: LotjaGi1g1v0337700 LjG1.1_chr1 79811290 79813848 +
3 domain predictions
1 GO term
LotjaGi1g1v0461200.1
n.a. 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TAIR: AT1G09780.1 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Swiss-Prot: sp|P35493|PMGI_RICCO 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TrEMBL-Plants: tr|A0A0R0F2Z4|A0A0R0F2Z4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0461200 LjG1.1_chr1 96528191 96534851 -
3 domain predictions
1 GO term
LotjaGi1g1v0461200.2
n.a. 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TAIR: AT1G09780.1 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Swiss-Prot: sp|P35493|PMGI_RICCO 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TrEMBL-Plants: tr|A0A0R0F2Z4|A0A0R0F2Z4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0461200 LjG1.1_chr1 96528289 96534851 -
3 domain predictions
1 GO term
LotjaGi1g1v0461200.3
n.a. 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TAIR: AT1G09780.1 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Swiss-Prot: sp|P35493|PMGI_RICCO 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TrEMBL-Plants: tr|A0A0R0F2Z4|A0A0R0F2Z4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0461200 LjG1.1_chr1 96529411 96534129 -
3 domain predictions
1 GO term
LotjaGi1g1v0461200.4
n.a. 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TAIR: AT1G09780.1 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Swiss-Prot: sp|P35493|PMGI_RICCO 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TrEMBL-Plants: tr|A0A0R0F2Z4|A0A0R0F2Z4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0461200 LjG1.1_chr1 96529411 96534415 -
3 domain predictions
1 GO term
LotjaGi1g1v0524100.1
n.a. 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TAIR: AT3G30841.1 Cofactor-independent phosphoglycerate mutase; Swiss-Prot: sp|O27628|APGM1_METTH 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1; TrEMBL-Plants: tr|I3SP89|I3SP89_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0524100 LjG1.1_chr1 104917638 104922268 +
3 domain predictions
1 GO term
LotjaGi1g1v0524100.2
n.a. 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TAIR: AT3G30841.1 Cofactor-independent phosphoglycerate mutase; Swiss-Prot: sp|O27628|APGM1_METTH 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1; TrEMBL-Plants: tr|I3SP89|I3SP89_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0524100 LjG1.1_chr1 104918195 104921704 +
3 domain predictions
1 GO term
LotjaGi1g1v0604500.1
n.a. GPI ethanolamine phosphate transferase 1; TAIR: AT3G01380.2 sulfatase and phosphatidylinositolglycan class N domain-containing protein; Swiss-Prot: sp|Q2U0S9|MCD4_ASPOR GPI ethanolamine phosphate transferase 1; TrEMBL-Plants: tr|K7K2J4|K7K2J4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0604500 LjG1.1_chr1 114932424 114942826 -
2 domain predictions
1 GO term
LotjaGi1g1v0604500.3
n.a. GPI ethanolamine phosphate transferase 1; TAIR: AT3G01380.2 sulfatase and phosphatidylinositolglycan class N domain-containing protein; Swiss-Prot: sp|Q5AXD1|MCD4_EMENI GPI ethanolamine phosphate transferase 1; TrEMBL-Plants: tr|A0A078IDZ6|A0A078IDZ6_BRANA BnaC05g48780D protein; Found in the gene: LotjaGi1g1v0604500 LjG1.1_chr1 114933667 114942586 -
2 domain predictions
1 GO term
LotjaGi1g1v0604500.4
n.a. GPI ethanolamine phosphate transferase 1; TAIR: AT3G01380.2 sulfatase and phosphatidylinositolglycan class N domain-containing protein; Swiss-Prot: sp|Q2U0S9|MCD4_ASPOR GPI ethanolamine phosphate transferase 1; TrEMBL-Plants: tr|K7K2J4|K7K2J4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0604500 LjG1.1_chr1 114937777 114942586 -
2 domain predictions
1 GO term
LotjaGi2g1v0125700.1
n.a. GPI ethanolamine phosphate transferase; TAIR: AT5G17250.1 Alkaline-phosphatase-like family protein; Swiss-Prot: sp|Q8TEQ8|PIGO_HUMAN GPI ethanolamine phosphate transferase 3; TrEMBL-Plants: tr|A0A0R0GV98|A0A0R0GV98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0125700 LjG1.1_chr2 46085060 46092124 -
3 domain predictions
1 GO term
LotjaGi2g1v0233400.1
n.a. Ectonucleotide pyrophosphatase/phosphodiesterase; TAIR: AT4G29680.1 Alkaline-phosphatase-like family protein; Swiss-Prot: sp|O14638|ENPP3_HUMAN Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; TrEMBL-Plants: tr|G7KJV4|G7KJV4_MEDTR Ectonucleotide pyrophosphatase/phosphodiesterase; Found in the gene: LotjaGi2g1v0233400 LjG1.1_chr2 69223540 69227981 -
3 domain predictions
1 GO term
LotjaGi2g1v0233500_LC.1
n.a. Ectonucleotide pyrophosphatase/phosphodiesterase; TAIR: AT4G29680.1 Alkaline-phosphatase-like family protein; Swiss-Prot: sp|J3SEZ3|PDE1_CROAD Venom phosphodiesterase 1; TrEMBL-Plants: tr|A0A1J7GU48|A0A1J7GU48_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0233500_LC LjG1.1_chr2 69229497 69231730 -
3 domain predictions
1 GO term
LotjaGi2g1v0233600.1
n.a. Ectonucleotide pyrophosphatase/phosphodiesterase; TAIR: AT4G29680.1 Alkaline-phosphatase-like family protein; Swiss-Prot: sp|J3SEZ3|PDE1_CROAD Venom phosphodiesterase 1; TrEMBL-Plants: tr|A0A1J7GU48|A0A1J7GU48_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0233600 LjG1.1_chr2 69276324 69278301 -
3 domain predictions
1 GO term
LotjaGi2g1v0326900.1
n.a. GPI ethanolamine phosphate transferase 2; TAIR: AT2G22530.1 Alkaline-phosphatase-like family protein; Swiss-Prot: sp|Q6C7Q6|GPI7_YARLI GPI ethanolamine phosphate transferase 2; TrEMBL-Plants: tr|K7K1D9|K7K1D9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0326900 LjG1.1_chr2 80222148 80230105 -
3 domain predictions
1 GO term
LotjaGi2g1v0326900.2
n.a. GPI ethanolamine phosphate transferase 2; TAIR: AT2G22530.1 Alkaline-phosphatase-like family protein; Swiss-Prot: sp|Q8TGB2|GPI7_CANAL GPI ethanolamine phosphate transferase 2; TrEMBL-Plants: tr|I1J516|I1J516_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0326900 LjG1.1_chr2 80222202 80230012 -
3 domain predictions
1 GO term
LotjaGi3g1v0053400.1
n.a. 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TAIR: AT3G08590.1 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Swiss-Prot: sp|Q42908|PMGI_MESCR 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TrEMBL-Plants: tr|A0A1J7H4F6|A0A1J7H4F6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0053400 LjG1.1_chr3 5560662 5566419 -
3 domain predictions
1 GO term
LotjaGi3g1v0053400.2
n.a. 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TAIR: AT3G08590.1 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Swiss-Prot: sp|Q42908|PMGI_MESCR 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TrEMBL-Plants: tr|A0A1J7H4F6|A0A1J7H4F6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0053400 LjG1.1_chr3 5561215 5566066 -
3 domain predictions
1 GO term
LotjaGi3g1v0261100.1
n.a. Non specific phospholipase C; TAIR: AT3G03520.1 non-specific phospholipase C3; Swiss-Prot: sp|Q9SRQ6|NPC3_ARATH Non-specific phospholipase C3; TrEMBL-Plants: tr|I1JMB6|I1JMB6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0261100 LjG1.1_chr3 47683176 47690191 +
3 domain predictions
1 GO term
LotjaGi3g1v0261200.1
n.a. Non specific phospholipase C; TAIR: AT3G03530.1 non-specific phospholipase C4; Swiss-Prot: sp|Q9SRQ7|NPC4_ARATH Non-specific phospholipase C4; TrEMBL-Plants: tr|I1JMB6|I1JMB6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0261200 LjG1.1_chr3 47750959 47758231 +
3 domain predictions
1 GO term
LotjaGi3g1v0261200.2
n.a. Non specific phospholipase C; TAIR: AT3G03530.1 non-specific phospholipase C4; Swiss-Prot: sp|Q9SRQ7|NPC4_ARATH Non-specific phospholipase C4; TrEMBL-Plants: tr|I1JMB7|I1JMB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0261200 LjG1.1_chr3 47751292 47754062 +
2 domain predictions
1 GO term
LotjaGi4g1v0317600.1
n.a. GPI ethanolamine phosphate transferase; TAIR: AT5G17250.1 Alkaline-phosphatase-like family protein; Swiss-Prot: sp|Q8TEQ8|PIGO_HUMAN GPI ethanolamine phosphate transferase 3; TrEMBL-Plants: tr|A0A0R0GV98|A0A0R0GV98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0317600 LjG1.1_chr4 69513825 69521006 -
3 domain predictions
1 GO term
LotjaGi4g1v0440700.1
n.a. Ectonucleotide pyrophosphatase/phosphodiesterase; TAIR: AT4G29680.1 Alkaline-phosphatase-like family protein; Swiss-Prot: sp|J3SEZ3|PDE1_CROAD Venom phosphodiesterase 1; TrEMBL-Plants: tr|V7CTL4|V7CTL4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0440700 LjG1.1_chr4 81418431 81426505 +
3 domain predictions
1 GO term
LotjaGi6g1v0113000.1
n.a. Non specific phospholipase C; TAIR: AT1G07230.1 non-specific phospholipase C1; Swiss-Prot: sp|Q8L7Y9|NPC1_ARATH Non-specific phospholipase C1; TrEMBL-Plants: tr|A0A1J7I450|A0A1J7I450_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0113000 LjG1.1_chr6 26941305 26946552 +
3 domain predictions
1 GO term
LotjaGi6g1v0179800.1
n.a. Non specific phospholipase C; TAIR: AT2G26870.1 non-specific phospholipase C2; Swiss-Prot: sp|O81020|NPC2_ARATH Non-specific phospholipase C2; TrEMBL-Plants: tr|A0A072UVR5|A0A072UVR5_MEDTR Non-specific phospholipase C4; Found in the gene: LotjaGi6g1v0179800 LjG1.1_chr6 47152049 47157698 +
3 domain predictions
1 GO term
LotjaGi6g1v0179800.2
n.a. Non specific phospholipase C; TAIR: AT2G26870.1 non-specific phospholipase C2; Swiss-Prot: sp|O81020|NPC2_ARATH Non-specific phospholipase C2; TrEMBL-Plants: tr|A0A151SC13|A0A151SC13_CAJCA Phospholipase C 3; Found in the gene: LotjaGi6g1v0179800 LjG1.1_chr6 47152289 47157344 +
3 domain predictions
1 GO term
LotjaGi6g1v0179800.3
n.a. Non specific phospholipase C; TAIR: AT2G26870.1 non-specific phospholipase C2; Swiss-Prot: sp|O81020|NPC2_ARATH Non-specific phospholipase C2; TrEMBL-Plants: tr|A0A151SC13|A0A151SC13_CAJCA Phospholipase C 3; Found in the gene: LotjaGi6g1v0179800 LjG1.1_chr6 47153968 47157344 +
3 domain predictions
1 GO term