Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0287500 |
| Transcript ID | LotjaGi3g1v0287500.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DETOXIFICATION; TAIR: AT1G51340.2 MATE efflux family protein; Swiss-Prot: sp|Q9SYD6|DTX42_ARATH Protein DETOXIFICATION 42; TrEMBL-Plants: tr|V7BWP1|V7BWP1_PHAVU Protein DETOXIFICATION; Found in the gene: LotjaGi3g1v0287500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:58128791..58135007) extracted from Lotus japonicus Gifu genome v1.2.
AAAACTAACAGAAAAAAAATGTCATTGCATGGGAGCAAAAACTCGAAAGTTCCAAAGTGCACCTATTTCTGAATAAGTTT CATTCATAAAACAACAATACAATTCATGAATCAAAGTCACCAGATTATGCCCAGAACGGGTCAGATGAATAGATTCAAGC TGCACATTGATCCATTTCAAATTCCATTATTCCTCCCTTCATCACCACATATCCTGATAGAATTGAAAATTCATAGTCAA GTGTTTGGTCCAACAACAACCATAGCCACAAGGTCGTGGACGAGGATCGACAAGACACGTTGAAGGTAGATCACCGTAAT TTTGATTTGTCTTGGATTTTTACTAAGTGTCCAAACAACATGCTATTATTTTCTTCAAATTTGATTTCCGACATGCACTT CATGGAATTTTTTATTACCTTACTTTTTTTTACTGGTCTTCAAATTTAGTGATTAGACAAATATGATCTTATTGCTAACT TTAATCTCCTCCTTTAAACCAAAAACCATATATAATGTAAAGTTTAAATAGGGATCAAAATTATGAAATCACTAAATTAA AGAACAAAATTGCAAGAAATTAAATACAGGACCAAAATCACTAAATCAATAAAATAAAAGGAAAAATTGAAGAAAATGAA ATGAAGGAACACTAATTAGTAATTACAAAATCACTAAGCTATAGAGATAAACAAATACCAATAAACAAATACCAATAAGG TGTTGGTTAAGTGGTAAGCAAACTAAATTTCTCCTAAAGACAACACAAATTCAAACCACCAGTAGGTAATTTGTTTATTA AATGTTAAGAGCTTATTATGCACATTAGTAGGTCCATTTTGCAATATCAGGTCCTATGATTACCTAATCTTCCGGTAGCC TTTATATTTGAATGAAACGGGTTAGATCAATATTTAGGAAATTAGACCGGTCATTAAATCAGTCGAGACACTTATTCAGG TTTCAAAGGTGGAACGGAACCCCTGAATTTACATGGAAAAGTTGGGGAAAATTCTTTAACTTTCCCCTAAACTTTCCTAC CTCCACGCGGAATGTGCCAGACTCGTGGCGGTCGCTGGCAAGCACGCAGTGCCACTTCGAAACTCTTGAGACGTTGATGG TGATGTTGCTGGCCACATGTTGCAACAACAAACATGCATATGCATGTACCATTGAAGAAGAAGAAGCGCAATAACAGTAC CTTGTCTGTTTTTGAGTGGAAGATGGGTCCCACATTCTGCTTGTGGACTGCTTTTTCGTCACCAAACAAGGATACTACTA CTACTACTACTATTGTTTCTGTAATTGTAGTTTTCTTCTTCTTCAACTACAGTACCATTCTTGCACGCAAGTTTCGTGGC ATGTTAGATTGTTTGAGATTTGGCACGAGTTAGGGAAGGGACCTGACTCACTTTTCCCCGAGTTAGGTAGCTTGAAGCCT CATCACGGTGTTTCTTCAAGTAGCAATTTTCTTTGTCTTAATAGTACTAATACTCATTCATTTGATTCAATCTATTCTAT TCAAAGCTAAAATGCCCCTCTCTCTTTCGTGTTTGTATTTCTGTTGAACTCGAGTTTTGGTGACATTCTCTGATTCACGT GGCAAAATCTAGCTTCTCTGTTTGCGTTTTACGTTAAATTTTACTATGATTCTCCAGGGTTGGGACGTCTGAAATCACGT TTGCTTGCTCTGGTGCAGACAGAAAGCAAATAGAGAACCAAACAGAAACAGAGTTTCCAAGGTTGGGAAAAGTCTCATGT CTCCTGTTAAATGTTGTTTTCAGAGAATTTAAGTCACATTTATGTTTTTTTTTAGTGATCAATGTAGGAACGTCAGTTTA TATTCTATGCAACAAGTGGGGAAGAATATGTAAACGCGTCTCATTCATTATTCAGTTTGTTCATCACTGTTTAGTTGATA AATATTCCTTGATTATATATTCGATTATGATCAGAATTGATTCACTACTTGATATTTTGCTCAAATAATGTTATGGAGAA TATATGGCTTTAAATTATGATATCTTAGATTAATATTCAAGCAAGCTAGGTATTGGAGCTTGTTCTGCATCTCTTCATTT TGGTATTACTAGCTAGCCTAGTAACTCATTTACAGCATCTCTGTAGTGATTTGGTTCAGTTGGTTTCTCAATTAACAAAG TTAGTTTGCCTTCCCAGATATGGCAGAGAAAGAGAGTCTGTATTCATCAGGTGATTGGAGGAGAATATCAACTTGCACTT TCTTTAAGGATGCCAGGTATGATATAATTCAACACTACATTCATTTTTTTTTTTCCATTTCATCAATTTATTTATGCTGT TGTTCTGATTTACCCATTGTGACTCTTGATTTTCTTGTCACTGCAGGCTAGTTTTTAAATCAGATAGTCTTGGTCGCGAA ATATTGTCCATTGCATTGCCTGCAGCAATGGCTTTGACAGCTGACCCTATTGCTTCACTAGTTGACACCGCTTTCATTGG CCAAATAGGTACCTTCTGTTATTACTTATTAGTTTATTATCTTTGAGCTAGAACCATAGGGAAATGAAATGTTGATCCAA CTTGAAAATTGGAGAGGGGAAAATAAATTTCTTATTATGCATCTAGTGTTGAATATTGTTGGTCCATACAGGTCCAGTGG AGCTTGCTGCTGTAGGAGTTTCCATAGCTCTCTTCAATCAAGTATCAAGGATTGCGATATTCCCACTCGTCAGTGTGACA ACCTCTTTTGTGGCTGAGGAAGATGCCCTCGGTGGAGCACACTCCCAGGAGGAGAGTAGAGAATTGGAAGCGGGTCTGAA AATGGATAATGATGCCATAAAGTTATTACAAAAAAAGGGTATCATTTCTCCCACTTCTCTTGTTGGTTTGGATTCACTTA AGTTTTCTTGGTAGGGTCTTATTTCCCCATAGGAAAGCCAATAAAAACTTATCTAGACTCTTGTTTTCTCGGTCCATTTC AGATGAAAGTTTTCACAATTCAGATTCGGCCGGCGTAAACTTCAATATTGTTAAGGAGGAATGTACGAAACGACATATCC CTTCAGCTTCATCAGCATTATTTTTTGGTGGTATCCTAGGCATCATCCAAGCAGTATTACTTATATCTGCAGCAAAACCA TTATTGAACTTCATGGGAGTAACTTCTGTAAGTACTTTTGTTGGCTGGTAGCACTTTGGCATTTATTTAGAACCTTATGC TATTGTCAAATAACATAATTGTTTATACAGGACTCTCCTATGCTACACCCTGCACAGCGGTATCTAACATTGCGGTCCCT TGGCGCTCCTGCAGTTCTTCTCTCGTTGGCGATGCAGGGAGTCTTTAGAGGATTTAAAGACACTACAACTCCTTTATATG CAACAGGTGGCCTTGACAAACTTAAATTGCTATTGATCTAGTGTCACAATGGTCCTGTTTGGATGTGTGGTCTTTGGAGC TTATCTACTAAAAAGCACTGAATAAGCTCAAATAAGTACTCTTTGATCTGCATCCAAACATGCTCTATATCTTGTTATCA TCTGATTCTAATTACTATTTGTTTGATGTAATCTAGTTGCAGGAGATGTGACCAACATAGCACTGGATCCTCTATTCATG TTTGTGTTCCGAATGGGTGTCAGTGGCGCAGCCGTTGCCCATGTCATATCTCAGTATGTTTATTATTTCATTGTGAATTA AATGCTCTGATTATACTCTTGTTTAAGTACTGATCAGTCTGCCAATTACTGTATCTAGAACTATCTTGTCCTTTGTCTCT TCTTTCCCTGTTGCATCTTTTGACCTAATCTTCTTTTATTTTCAAATTGGTTGTAAATGTAGGTACCTAATTTCAGTTAT ACTCTTGTGGAAGTTGATGGAACAAGTTGATCTTATACCTCCAAGCATCAAACATTTGCAATTTGACCGATTTGTTAAAA ATGGTATCGGTCTACTGTTCCTATAAAAATTTATTTATGCTTCTCTTTTCTCCTATTTCTTTCAAATTGATGCTTTTATT GATTGTTTCCCTTGGATATAGGTCAACTAATATTTTAGCATTGACACTTGACACTATTATTGTTCTTTCCTGTTTAATTC TTGTCATTCAGGTTTTCTATTATTAATGAGAGTCATTGCTGTTACATTCTGCGTGACACTGGCCGCATCCCTAGCTGCAC GCCAGGGAGCAACATCGATGGCTGCATTTCAAGTTTGTCTGCAGATTTGGTTGACAGTGTCTCTTCTTGCTGATGGTCTG GCTGTTGCTGGGCAGGTAAGATATGATTACACATTTACACTGTCCATTAAACACCTTGTTGTGTTGATTCATGATGGTTT CATATCAAAACATTGGATAATTGTCAATTGTCTCTCTAAAGCACAATCTGGTTCTATGAGTTCATATGACTTGCAAAATA ACACAATCTTGGTTTCAGGCTATTCTTGCTGGAGCATTTGCTAATAATGACTATGAAAAGGCCACGGAAACTGCATCCCG AGTGTTACAGGTGCTTAAGAATGTTAAAAGAAATCGTGTGTCCTTTTTCAAGACATTAAATTGTGAATGTGACGGATAAT GATAATGCAGATGGGTGTGGTTCTAGGATTAGCACTTGCTTTCATTCTTGGAGCGGGATTGCACTTTGGAGCTAAACTAT TTACAAAAGATGTTGATGTCCTCCACCTCATTAGAGTTGGGGTCCCGGTAATTTATTCATGTTCAAATTGAAAGTGATAT TGGTAATCTATTCATTTCAACCCCCCAAAGAGTGGAACTTATATTGATGTTAATGTTATTTTTTTTTTGTTACAGTTTGT TGCACTCACTCAACCCTTGAATGCTTTGGCTTTTGTATTTGATGGTGTCAACTTTGGAGCATCTGATTTTGCATATTCAG CCTTCTCCATGGTTTGTATTTATCTTCAATGATTCATCTGCTATTATAAGTGCCATATTTTAAGCTATCCATGCCCCCAC CCATTTTTTGTTCCTCTCTAATCTCACTCACGACTCGTCAAAAATTGTCAAGTCTGACCTCGACTAGAGATAACTAATGA AGTACTTATCAATGGGAGGAAAATGCTCACCCATTGCCTCTCAGCTAGATTTTTGGGTGTAGTTAGGCCCAATGCGAATT CTAATATGGTACTAGAGCCAATTCTCTAGGCTTGACGGGGTGTTAAGTCAACTTATAAATAAGAGGGAAATCCTCATTCC TGTGCTAGAACAATTTGCAAAAAGAGGATGCAGGAGGGTTAGAGCCAATCTAAATTTTATTTAATTCAATCATGGTATTC TTCATTCTCAGGGTGTGGTAGCAATTATCAGCATCATTTGTCTGCTTATTTTGTCTTCTGCTGGCGGTTTCATTGGAATT TGGGTTGCTTTGACCATCTATATGAGTCTAAGGGCATTTGCTGGCTTCTTGAGGTAATGATTTTCTAATTTTTTTTTCCT GAAGTTTATCTTTGATACTTTTCTTTTCACTGTCAAGACAGTTGATACATCTATGAGGTCAAGACGGTAACTAATGAAAA ATGTTGATGCAGGATTGGAACAGGATCAGGACCATGGGAGTTTCTTAGGTGCTGATTGCACTAGGTAGGCACCATGGTCA TGGCTTCATAATTAGCCTCAGTTTCAGTGGTGTTAATGTCATAGTGAGAAAAAGGTTCCCTAGGCTTTTCAATCTCTTGG ATTCTATTCTGAAGAATAGGCACGCACTTCTTCTAGCTTGATTATGATTGGGGCATTGGTTAGAAAAATCTACCTCTGCT TCAGATTATGTACAGAAAAAATCTCCCAGTGTATCTCATGTCCTCATTAAATATAGTATGACATGTAATATAGGATATAT TAGGATTAAACTTCTTGTAACTATGCAACAGATATAATTACATGAAAATGAAAGATAGCTCGGAACAAGTGCTACTTGCT AGAATTGAAAAATTTGGAACTCTTTGGTTAGATACTAGATGGAATGCTTCTTTTTTGTGGTCGTAGTATATGCTTGCATG ACAAAGCACAAGACCTGGAAACTGGTACCTATAGCAGAGTATTCCATGGAGCTCAAATCAATTTTTCAAAGATAAGATGG TGGTAGTACCAGGAAAAGGAAAAGGAAAAATAACTCCCGTGTCTAAGACAATGTTTACATGTATCCTAAAAGGCAAATGC TACCATACCTCAATTATATCATACCTTAGTCCTGGACCAATTAAAAAACGTTTCACG
CDS sequence (LotjaGi3g1v0287500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAGAAAGAGAGTCTGTATTCATCAGGTGATTGGAGGAGAATATCAACTTGCACTTTCTTTAAGGATGCCAGGCT AGTTTTTAAATCAGATAGTCTTGGTCGCGAAATATTGTCCATTGCATTGCCTGCAGCAATGGCTTTGACAGCTGACCCTA TTGCTTCACTAGTTGACACCGCTTTCATTGGCCAAATAGGTCCAGTGGAGCTTGCTGCTGTAGGAGTTTCCATAGCTCTC TTCAATCAAGTATCAAGGATTGCGATATTCCCACTCGTCAGTGTGACAACCTCTTTTGTGGCTGAGGAAGATGCCCTCGG TGGAGCACACTCCCAGGAGGAGAGTAGAGAATTGGAAGCGGGTCTGAAAATGGATAATGATGCCATAAAGTTATTACAAA AAAAGGATGAAAGTTTTCACAATTCAGATTCGGCCGGCGTAAACTTCAATATTGTTAAGGAGGAATGTACGAAACGACAT ATCCCTTCAGCTTCATCAGCATTATTTTTTGGTGGTATCCTAGGCATCATCCAAGCAGTATTACTTATATCTGCAGCAAA ACCATTATTGAACTTCATGGGAGTAACTTCTGACTCTCCTATGCTACACCCTGCACAGCGGTATCTAACATTGCGGTCCC TTGGCGCTCCTGCAGTTCTTCTCTCGTTGGCGATGCAGGGAGTCTTTAGAGGATTTAAAGACACTACAACTCCTTTATAT GCAACAGTTGCAGGAGATGTGACCAACATAGCACTGGATCCTCTATTCATGTTTGTGTTCCGAATGGGTGTCAGTGGCGC AGCCGTTGCCCATGTCATATCTCAGTACCTAATTTCAGTTATACTCTTGTGGAAGTTGATGGAACAAGTTGATCTTATAC CTCCAAGCATCAAACATTTGCAATTTGACCGATTTGTTAAAAATGGTTTTCTATTATTAATGAGAGTCATTGCTGTTACA TTCTGCGTGACACTGGCCGCATCCCTAGCTGCACGCCAGGGAGCAACATCGATGGCTGCATTTCAAGTTTGTCTGCAGAT TTGGTTGACAGTGTCTCTTCTTGCTGATGGTCTGGCTGTTGCTGGGCAGGCTATTCTTGCTGGAGCATTTGCTAATAATG ACTATGAAAAGGCCACGGAAACTGCATCCCGAGTGTTACAGATGGGTGTGGTTCTAGGATTAGCACTTGCTTTCATTCTT GGAGCGGGATTGCACTTTGGAGCTAAACTATTTACAAAAGATGTTGATGTCCTCCACCTCATTAGAGTTGGGGTCCCGTT TGTTGCACTCACTCAACCCTTGAATGCTTTGGCTTTTGTATTTGATGGTGTCAACTTTGGAGCATCTGATTTTGCATATT CAGCCTTCTCCATGGGTGTGGTAGCAATTATCAGCATCATTTGTCTGCTTATTTTGTCTTCTGCTGGCGGTTTCATTGGA ATTTGGGTTGCTTTGACCATCTATATGAGTCTAAGGGCATTTGCTGGCTTCTTGAGGATTGGAACAGGATCAGGACCATG GGAGTTTCTTAGGTGCTGA
Protein sequence (LotjaGi3g1v0287500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEKESLYSSGDWRRISTCTFFKDARLVFKSDSLGREILSIALPAAMALTADPIASLVDTAFIGQIGPVELAAVGVSIAL FNQVSRIAIFPLVSVTTSFVAEEDALGGAHSQEESRELEAGLKMDNDAIKLLQKKDESFHNSDSAGVNFNIVKEECTKRH IPSASSALFFGGILGIIQAVLLISAAKPLLNFMGVTSDSPMLHPAQRYLTLRSLGAPAVLLSLAMQGVFRGFKDTTTPLY ATVAGDVTNIALDPLFMFVFRMGVSGAAVAHVISQYLISVILLWKLMEQVDLIPPSIKHLQFDRFVKNGFLLLMRVIAVT FCVTLAASLAARQGATSMAAFQVCLQIWLTVSLLADGLAVAGQAILAGAFANNDYEKATETASRVLQMGVVLGLALAFIL GAGLHFGAKLFTKDVDVLHLIRVGVPFVALTQPLNALAFVFDGVNFGASDFAYSAFSMGVVAIISIICLLILSSAGGFIG IWVALTIYMSLRAFAGFLRIGTGSGPWEFLRC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 166 | 166 | - | – | |
| PANTHER | 17 | 511 | 495 | 3.8E-251 | – | |
| PANTHER | 17 | 511 | 495 | 3.8E-251 | – | |
| CDD | 34 | 502 | 469 | 2.22969E-112 | – | |
| TIGRFAM | 44 | 482 | 439 | 1.0E-132 | ||
| Pfam | 164 | 255 | 92 | 7.8E-12 | ||
| Phobius | 167 | 189 | 23 | - | – | |
| TMHMM | 168 | 190 | 23 | - | – | |
| Phobius | 190 | 208 | 19 | - | – | |
| Phobius | 209 | 229 | 21 | - | – | |
| TMHMM | 210 | 232 | 23 | - | – | |
| Phobius | 230 | 257 | 28 | - | – | |
| Phobius | 258 | 284 | 27 | - | – | |
| TMHMM | 262 | 284 | 23 | - | – | |
| Phobius | 285 | 309 | 25 | - | – | |
| TMHMM | 309 | 331 | 23 | - | – | |
| Phobius | 310 | 331 | 22 | - | – | |
| Pfam | 314 | 467 | 154 | 1.9E-13 | ||
| Phobius | 332 | 342 | 11 | - | – | |
| TMHMM | 343 | 365 | 23 | - | – | |
| Phobius | 343 | 366 | 24 | - | – | |
| Phobius | 367 | 385 | 19 | - | – | |
| TMHMM | 385 | 407 | 23 | - | – | |
| Phobius | 386 | 408 | 23 | - | – | |
| Phobius | 409 | 419 | 11 | - | – | |
| TMHMM | 419 | 441 | 23 | - | – | |
| Phobius | 420 | 441 | 22 | - | – | |
| Phobius | 442 | 452 | 11 | - | – | |
| TMHMM | 451 | 473 | 23 | - | – | |
| Phobius | 453 | 472 | 20 | - | – | |
| Phobius | 473 | 478 | 6 | - | – | |
| TMHMM | 478 | 500 | 23 | - | – | |
| Phobius | 479 | 500 | 22 | - | – | |
| Phobius | 501 | 512 | 12 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0287500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…