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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0288400 |
| Transcript ID | LotjaGi3g1v0288400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Outer envelope protein 80, chloroplastic; TAIR: AT5G19620.1 outer envelope protein of 80 kDa; Swiss-Prot: sp|Q9C5J8|OEP80_ARATH Outer envelope protein 80, chloroplastic; TrEMBL-Plants: tr|I3SNW6|I3SNW6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0288400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:58499434..58507099) extracted from Lotus japonicus Gifu genome v1.2.
CCATTAAAATCCCTCTTCTTCCAAAACCCTCTCATTCTCACTCTCACTCTCCTCTCGCAACCGCGCGTTCTCACATCGCA AACGCCGCCAACTCAATCACGCAACTCATTCACTCGTTCACGGCTCACTCCACCGAGTTAACTCGGACCGCGCTGCGAAA ACCGTTGCCGTCGCCGTCGTCGCTCCTGTGCTCGGCGACGTTGTCGCTCACCGATGAGAGGAAAGGAGGAGGAGCTTCTT CGTCGCCGATTCTGTGTTCGGCGTCGTTGTCTCTGGCGGAGGAGTCTCAGCAGAAGGCTCGACAGAGCGAGGAGCGAGTG CTCATCAGCGAGGTTCTTGTTCGGAACAAGGATGGTGAAGAACTCGAAAGGAAGGATCTCGAGGCGGAGGCTGCGCAGGC TCTCAAGGCTTGTCGACCTAACTCGGCTCTCACAGTGCGCGAGGTGCAAGACGATGTGCACCGCATCATCAATAGCGGTT ACTTCTGCTCCTGCGTGCCGGTTGCTGTTGATACGCGTGATGGTATTCGATTGATATTTCAGGTATATTCTGTTCGATAG ATATTGAACGATGCTGAATTGAACACTAGCTAACTGTGATAGTTAATCTTTGAAATTTTGATTATACTTTTATCATGCTT TTTAAGTAGAATTTCTCATTCTAGTGTTGCATGTTCAAGTCTGCATTGAGTTAGGGTTGACAGTGTTATGGAATATTGAA TGCTGTTGTGATAGTACTGGTTTCTTGTGGCATAAGGTAGAACCAAATCAAGAGTTCCAAGGATTGGTATGCGAAGGAGC GAATGTTCTTCCGGCTAAGGTTTTAGAGAATTCTTTTGGAGATGGATATGGTAACTCATTCCTCCTTGTTCTTATCTGTG CAATGTTGTGATCATGAAAATGATGATATTCGTGTATGACCTTCGCTGTATTCTTATTTATATGTTAAGTTGTGCAGGGA AAGTTATCAATTTGAAGCGCTTGGATGAAGCAATATCTTCCATTAATGGCTGGTACATGGAACGAGGTCTTTTCGCCATG GTTAATCCCCCTTAACTTCTGTTTTGATTTAAAAAATCTTGTAAACATATTCCTGCTTGGATATCACTCATATTTTTGGT AGCCTTAGCGCCATAAAGTATCATTCTATTATTTCTTTCATCTTTACTTGTCTTATGCTCAAATCAATATTCCAATTGAA ATTGTCTCCCCCCCCCCCCTCTTTGTTTACCTGCCTTCTAGGTTTCAGCTGTTGAGATTCTCTCTGGAGGTATTTTGAGA TTACAAGTTTCAGAGGCTGAGGTCAATAATATTTCCATTCGGTTTCTGGATAGGAAGACGTAAGATTTTCTTTCAATTTG ATCTACACAAAGAAATACACTTGATTTTATGTTATATAATTTCACGAAGAGGTTTCCGATACTAACCTGATTTTATATCT GTAGTGGTGAGACTACTGTAGGGAAGACAAAACCTGAAACAATACTTCGGCAAATTACAACGAAGAAGGGACAGGTAACT CCTTGACCTAGCACTGGGTACTCCAACAGATGATGGTTCATGGTTTCTTGTTAGCTAGCTTTTTTCATAAGTTTTATCAT GAACTAGTGTGCATTTCATTTTTGTTGAAAACCGTGAATTGAATTAATACAAGAGAATTTTATATACCTTTTATATACTA GTCTAATTTAAGTTTCAAAGCTGATTGAGTGATTGTGGTATTATTTTATCAAATTTGGTTGTGAACATTCTAAGGTCTGG TCTGTGGCATCTGGGATATCTGTATATGTTCAGTTGTTCACTGAAGGGGTCGTTTCAGATTTATCCTAATTTGATCTTTT AGAAAACATTCCTTCTTGAATTTGCACATCTTCTCAGACGGGTTTTGGCATCATCCATAATTGTATTTCCAGGTTTACAG CATGCTTCAGGGGAAAAGGGATGTTGAAACTGTATTAACTATGGGGATCATGGAAGATGTTAGTATTATTCCCCAACCAG CAGGTAATGACCATTTTTCGCAAAATTAGCTGAAAGCTTGCTTCTAGCTGAGAGCCATTTAGTTAGCAAATTGAAGTGTT TAGGAAGTTGTTGAACTAGCTGCAAAAGTAAAATTACAGAATAAGACATATTTATATGGTTTTTGATTATTTAGCATTAC TTTATTTACATTTAAATTTTTATATAATATTTATTTGAAATAATTATTTGTATTACATGTTATAATTTATTACAAATGAT TTATCTTCTTAAAATTTAATACTATTTTTTTATATTTTTATTAAATGAAATGAGATAATATAGATGAAGTTAGATTATAA TTTAATTAACTAAACTAATATTTCTTTAAGATTAATAAAGTACTTTTAAACTTTGTATGAAACATAAAATAATAGTCATT TTGAATCAAAAGAGTTTTGTAGGATAATTTTGAATCAAAAATTTAATTAAAGTAGTAGGGGTAAAAATTAGAATAAAAGC AATAAGCTATAGGCTATAATATGAGTTCAAATGCAACTTGCAATAGTGTTTCAAAATATGCTACAATCTAGTGAGATAAG CATGGTTACCAATCACTTCTATTTTGGTCAAACAAGGTTATAAGCTAGTTAAATAAGCTTTAAACTAGAATAAAATCAAT AATAAGCATAGGCTCTAATATAAGTTCACATGCAACTTGAAGCAGCGTTTCAAAATACCCTACAAGCTAGTGAGATAAAC TTGGGTACCCAACACTTCTATTTTGGTCAAACAAAATTATAAGCTATAGGCTATAATATGAGTTCAAGTGCAGCTTGAAG TAGCGTTTCACAAAACGCTGCAAGCTAGTGAGATTAGCTTGGTTTCCAAACACTTCTATTTTGGTCAAACAAGCTTATAA GCTTAGTCAAATAAGCTTTGAGCTTGAATATAAACAATAAGCTATAGGCTATAATATGAGTTCAAGTGCAGCTTGAAGTA GCGTTTCAAAATACGCTACAAGCTAGTGAGATTTGCTTGGTTGCCAAACACTTCTATTTTGGTCAAACAAGCTTATAAGC TAGTCATATAAGTTTTAAGCTAGCTGAAATATATCGTCAAACTCACTCAATGAATACATACTAAAATGGGCTTTAATTTA AGGCAAGCAACTGTAGGAAAGAAAAATGGCAAGTTTTCAGTGCTAAGTAGTAACTGCACTTGCGAACTTGTAATGTAATT TCTTACACGGCCATATATAAGTATACCCTTTTTTATTCAGCGTTTTAGTATCCTACCTTGAGCTACTTCGTATAATTGTT ATAAAAAAAGGAGATAGTATTTCGTACTAACTTGGGGAGGAACTAGGAAACTTAAGTTAATGGAAACACTAGAAAGCCAA AAAGGAAGAAAAGAAAAGAGAAATGGGATATTTCAAAATATAATGGGCTATTTGGATTGAGAAAACATCTATTGTATTCA TTTCTTTTAAACTTTTCAATTTGAAATTGCCACTTTGTTTATTGTTTTCAAATATTTTTACAAGAGAAATTTTTTTCTCA TTATTTTCTAAAAAAATATTTGAAAACATAAATTAAAGTCGGATTTTGATATTTAAAAGTGGAAATAGGAAATACAAACA GAAAATGTTTTCTCAAACCACTGGAAGTCTAAATAGTTTCTATTGCTGAAGAGGAATATGTTGTAGTGTTCTTAAGTGGC CAAATTCTTTTCTCAGTAATTCACTGTTCGGATTTTGTTAGCTTGTCATGATACCTCACTGCACCTCAACTCATTCTGTC TGAAGGGAAATACATTCTTAAAACGCAAGATTTTCATTTTTCTTTTCTTGTCTTCCCCAACTAGATTCATAGTATTCTCT GAAGTCTACACTACTGAATTTTGTTTCTTGCCATGGTATAGATGCGGGGAAGGTTGATTTGGTGATGAATGTGGTGGAAC GTCCTAGTGGAGGGTTTTCTGCTGGTGGTGGTATATCAAGTGGGTGAGTATTGCTAGGCTAAAGCATAAAACAACTTAAT TTACTTATTACGTAATAAGTGTCATGTTGAGACTTATGAAATTTACTACCGTCCCTAGTAATTTTGTAAGTTACTGTAAA GTAAAATCCTGTACTTTGAATTTCCACAAGACAAATATCCCCTTCATTGAGCTTTTCATACTACTCCATATGCTAAATGC ACTTTACTTAAACTATTCGGCAGATTAGCATAATTTTCCCCTATCATTTGCTGCATAGTCTGACTAGTTGCTTACATTCG CAGGATTACAAGTGGTCCACTGAGAGGACTCATTGGAAGGTTAGCTTATTTTCTAGTCTTGTGGGTGTTAAACTGTTAAT GCTTTGTCTTCAGGCATCCTACCCTCTCCATTTAATAGCAAAGGTTTCTTCCATTCAATTAAATCCATTTCAAGGGTCAT TTACCGCTGCTGATGGCTCCATATACTACTATGGAGTGTTGATGCTAATGGTAAATATGTCCTTTGTAGCTAGCTGTAAG CAGACTACCTCCTGCATATAATTATGCAGATGATAGAACTGAATCATTTTGAAAATACGGTTGATATTAACTTGTCCTGA TAGCCTATCAGTTTATCTATGCCTGTGTATTTTTCCTATTATCAGTAAAACAGAATAAAGTTCTTTTTCCTTTGACATAT GTTCTCATATTGCATGTTGCTTATGGTCCAATTGCAACTGGTTTACTCATCACTGATCCACACAAGTCTATTTTAATTTC ATTGCAGCTTCGCATATTCTCATAGGAATGTTTTTGGGAGAAACCAGAAACTCAATATTTCCTTAGAGAGGGGTCAGATT GACTCAATCTTTCGCATTAACTACACAGACCCTTGGATTCAAGGAGATGATAAACGAACATCTAGAACAATAATGATCCA GGTAATCTCTGAAGGTTTAATTGTGCGATCTCAATAACTGTACTGTTGATGATAGAAAGTTAAAGATTGTGTATGCTGAT ATTTAATTAACTTCTTTTTAGAATTCAAGAACGCCTGGAACAATTGTTCATGGTAACGTGGATGGTAACAGTAGCCTGAC CATTGGCCGCATCACAGGTGGTATGGAATTCAGTCGACCAATCAGGCCAAAGTGGAGTGGAACAGCAGGACTTATTTTCC AGGTGCTTCATTAACAGTTCTGGTCAATGTTTTCGTGTGTTGTAATTTGTAATATATTTTTCTTAATATTCTGGTTTCAG TCATTCCACTCTAGCTATATCAATATCACTTGTGAATTGCTGATTTGCTTAGTTTAGTTAAACCATGTAATCACTACTCA GTTTGTTGCTGCCTTAAATGTAATTATAATAGTCTGTATGCCTAGTTATGTCACTGATTCTTTTATTTCATTCTTTTCAA ATTATCTCTATTATTTCAGCGTGCCGGAGTCCGTGATGACAAAGGTGATCCTATCATTAAGGATTGTTACAGCAGTCCAC TTACTGCAAGGTTATAATCGAAAAATGCTACATGTTACTTGTTTTGGACTTCATCTGATTCTTTCTAACCTTTTTCAAAT TTTCCTTGTAGTGGCAATACCCACGACGATACGTTGCTTGCTAAAATCGAAACTGTTTACACTGGTTCTGGTGACCATGG ATCTTCTATGGTTCGATATGATTTGAATGCAGTTCTTCAGTTTGAATGTAATTCTATGTTTCTTATCATTACATGCTTGG TTTTGCAGTTTGTCCTCAACGTGGAACAGGGGCTTCCTCTTTTGTCTGAATGGCTGTCCTTCACGAGGGTGAATACACGG GCTAGGAAGGGTGTTGAGATAGGTCCTGCTCGTATTCTTTTGAGGTATGAAATACATGTTGTCAACGCCTTCTCATGAAA AGGAAAAGGAATACATTGTTATTTACACATTAAAGCAAAACAAACAATCTTATATTTTACTAACTTTAATTGGTTCACTG CTAGTCTATCTGGTGGTCATGTGAAGGGAAATTTCTCTCCCTATGAAGCTTTTGCCATTGGTGGAACAAACAGTGTCAGA GGCTATGAAGAAGGTGGTGTGGGATCTGGTCGATCATATGTGGTTGGCTCTGGAGAAATTTCTTTTCCCATGGTACTTGA GTTTTATCAAGCCTTTTCCTGCTCAATCAGTTACAACCTGGCTGTATTTTTTGTTTTTGTTTCTGAGTCGTGCGATATCT TAGAGCTGTAGAGTGAAATGTTTTTGGAATATAGAGTAGAAGATCGCTTGTAAAATATTGGAAATAGATTTTATAAATCT GATGTGTTAAACATAAGTATAAACTGAGAAGAACAAAGATATGTTCTAGTCTGAAGAAAGGGTAAAATGCTTAACTGGAG TAAATAAAATCTAATGAAAATTTATAAAGGAACTCTCAAGTTTCTGCTAAGTTGCATATAATGACTTTCTTCATTGAAGA TGGCAATATGTCGCAATTCAGAATTTAAACTTTTCTGTTTCTTTTTCTGACCTGACCTTACTACCTCCCATGAATTTCCC AAAAGTATTGTACTGTTTCAATCCGACACAAACCCAAGAACAAGAAGAGAAATTAACATAGAATCAACATGGTTCAATCT ACAATAAACCTTCCACAGAAAATTTTCTACGATCAATAAATATTTCAAGGAATAGCTGCTCAACACTCAAACCCTAGTCA GCAAAACCCAATTCAACAGATGTTCACTGTAAAAGATTAAAGACACTATGAACAAACTACTAAGTTAGCAAGATTTATGT GTATTTTGTCTGTAGTCCCTCTCCCAAGAATAAAATCCTTATTAGGTCACCCAACATATGTTGGGTCAGGTATTGCCCTC CACTGATACACAGCCACTTATAACAGTAGTGATGGCAGGTGTCTTATCAAAGAATATAATACTACTACAATTTTATGAAA CAGAATGTGCATGTAGTAATGTAATATGTAATATTTTGAAGTACTATAATAACTTTTGTTGCATATATCCGTGCCCCCAG GTGCATGCATTTGACTAAATATAAGTTATAACAGGGTCAGGTGCATCAAGCATGCGTATTGATCTTACTTTTTTATGTTT GCAGTTTGGGCCAGTTGAAGGTGTTGTGTTTTCTGACTATGGAACTGATCTTGGGTCAGGTCCAACTGTCCCTGGTAGGT CTTCTTCATTTGGATTTTTCAATTTCTTCTTTTTTATTTGGTTGTTTTTTTCTGTATTTCACGAAGATGAGTAATATTTC GGAGATCACATAATGCACATGAATGCTATCATAGAAGTGATACTGATCTTAATTAAAAGAGTGAACTTGTCCTATGTTAT GCAAGTTTTTTTTGCTGCTAAAAGGACTACAATCATAGAGTAATTATTTTTACTTAGCAGAACCAACTTTTCTAGGCCTA TCTTTGTTATTTGGCTCCACAATCTTTTTTCTAAACTTTTTTACTTCTCAACTTCCATCCCAACTATTAGTGCTCTAGAT TTTTGCCAATATTGCTCATGCTGTCCTTATTGAGAGCACATATTAAATGGTGTTTTGTGTTTTTGTTTCAGGTGACCCTG CTGGAGCAAGGGGGAAGCCTGGAAGTGGACACGGGTATGGGTTCGGCATCCGCGTGGATTCGCCTCTAGGTCCTTTGCGT CTTGAATATGCCTTTAATGACCAGAAAGACAAGAGGTTCCACTTTGGAGTTGGCCATAGAAACTAA
CDS sequence (LotjaGi3g1v0288400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCCAGAATTCAAGAACGCCTGGAACAATTGTTCATGGTAACGTGGATGGTAACAGTAGCCTGACCATTGGCCGCAT CACAGGTGGTATGGAATTCAGTCGACCAATCAGGCCAAAGTGGAGTGGAACAGCAGGACTTATTTTCCAGCGTGCCGGAG TCCGTGATGACAAAGGTGATCCTATCATTAAGGATTGTTACAGCAGTCCACTTACTGCAAGTGGCAATACCCACGACGAT ACGTTGCTTGCTAAAATCGAAACTGTTTACACTGGTTCTGGTGACCATGGATCTTCTATGTTTGTCCTCAACGTGGAACA GGGGCTTCCTCTTTTGTCTGAATGGCTGTCCTTCACGAGGGTGAATACACGGGCTAGGAAGGGTGTTGAGATAGGTCCTG CTCGTATTCTTTTGAGTCTATCTGGTGGTCATGTGAAGGGAAATTTCTCTCCCTATGAAGCTTTTGCCATTGGTGGAACA AACAGTGTCAGAGGCTATGAAGAAGGTGGTGTGGGATCTGGTCGATCATATGTGGTTGGCTCTGGAGAAATTTCTTTTCC CATGTTTGGGCCAGTTGAAGGTGTTGTGTTTTCTGACTATGGAACTGATCTTGGGTCAGGTCCAACTGTCCCTGGTGACC CTGCTGGAGCAAGGGGGAAGCCTGGAAGTGGACACGGGTATGGGTTCGGCATCCGCGTGGATTCGCCTCTAGGTCCTTTG CGTCTTGAATATGCCTTTAATGACCAGAAAGACAAGAGGTTCCACTTTGGAGTTGGCCATAGAAACTAA
Protein sequence (LotjaGi3g1v0288400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIQNSRTPGTIVHGNVDGNSSLTIGRITGGMEFSRPIRPKWSGTAGLIFQRAGVRDDKGDPIIKDCYSSPLTASGNTHDD TLLAKIETVYTGSGDHGSSMFVLNVEQGLPLLSEWLSFTRVNTRARKGVEIGPARILLSLSGGHVKGNFSPYEAFAIGGT NSVRGYEEGGVGSGRSYVVGSGEISFPMFGPVEGVVFSDYGTDLGSGPTVPGDPAGARGKPGSGHGYGFGIRVDSPLGPL RLEYAFNDQKDKRFHFGVGHRN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 260 | 260 | 4.3E-153 | – | |
| PANTHER | 1 | 260 | 260 | 4.3E-153 | ||
| Gene3D | 10 | 261 | 252 | 4.4E-21 | – | |
| Pfam | 16 | 261 | 246 | 1.4E-40 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Outer membrane | The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites. |
Expression pattern of LotjaGi3g1v0288400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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