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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0347100 |
| Transcript ID | LotjaGi3g1v0347100.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock 70 kDa protein; TAIR: AT5G02500.2 heat shock cognate protein 70-1; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|A0A0E0HFK2|A0A0E0HFK2_ORYNI Uncharacterized protein; Found in the gene: LotjaGi3g1v0347100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:72470284..72472251) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTTCCAAGGCAGAAGGAAAAGCTATCGGCATTGACCTCGGCACCACCTACAGCTGCGTCGGCGTATGGCAAAACGA CCGCGTCGAGATCATAGCCAACGACCAAGGCAACAGAACCACCCCTTCCTACGTCGCATTCACCGACACAGAGCGTCTCA TCGGAGACGCAGCCAAGAACCAAGTCGCCATGAACCCGCAGAACACTGTCTTCGACGCCAAACGCCTCATCGGCCGCAGA TTCTCCGACCCATCTGTGCAAAGCGACATGAAACACTGGCCTTTCAAGGTGGTTCCCGGCGCCGGCGAAAAACCCATGAT CGCCGTCAACTACAAAGGCGAACAGAAGCAGTTTTCAGCTGAAGAGATTTCTTCAATGGTGCTGACAAAAATGAGGGAAA TCGCAGAGGCTTTCTTGGGGCAGAGTGTCAAGAACGCGGTGGTTACTGTCCCTGCTTACTTCAATGATTCGCAGAGGCAA GCCACGAAAGACGCCGGCGCCATTGCTGGACTCAACGTGCTGCGGATTATCAATGAGCCAACTGCTGCTGCAATCGCTTA TGGTTTGGACAAGAAGGCTTCGAGCAGCGGCGAGAAGAATGTGCTCATCTTCGACCTCGGTGGTGGCACGTTTGATGTTT CTCTCCTCACCATTGAGGAAGGGATTTTCGAAGTGAAGGCTACTGCAGGGGACACCCATTTGGGAGGTGAAGATTTTGAC AACAGGCTTGTGAGTCACTTCGTTGCAGAGTTCAAGAGGAAGCACAAGAAGGATATCAGTACCAATGCTAGAGCTTTGAG AAGATTGAGGACTGCTTGTGAGAGAGCCAAGAGGACTCTATCTTCGACTACTCAGACAACCATTGAGATTGATTCTCTTT TTGAAGGGATTGATTTCTATTCAACTATTACAAGAGCGAGGTTTGAGGAGTTGAACATGGACTTGTTCAGGAAATGCATG GAGCCTGTTGAGAAATGTTTGAGAGACTCCAAGATTGATAAGAGCAATGTTCATGATGTGGTTCTTGTTGGTGGATCAAC TAGGATTCCAAAAGTGCAGCAATTGCTTCAGGATTTCTTCAATGGGAAAGAGCTTTGCAAGAGTATCAACCCTGATGAGG CTGTTGCATATGGAGCTGCAGTGCAAGCTGCTATTCTGACAGGTGAAGGGAATCAGAAAGTTCAGGACTTGCTTCTTCTT GATGTTACCCCTCTCAGCCTTGGAATTGAAACTGCTGGTGGTGTGATGACAGTGCTGATTCCAAGAAACACAACAATACC CACCAAGAAAGAACAGATTTTTTCTACTTACTCAGATAATCAACCTGGAGTTTTGATTCAGGTGTATGAAGGTGAGAGAG CAAGAACCAAAGACAACAACCTTTTAGGGAAATTTGAGCTTGCTGGCATCCCTCCAGCGCCAAGAGGAGTTCCTCAAATC AATGTCTGCTTCGACATTGATGCGAACGGTATTCTGAATGTTTCTGCTGAGGATAAGACTGCAGGGGTGAAGAACAAGAT CACCATCACCAATGACAAGGGGAGGCTGAGCAAGGAGGAGATTGAGAGGATGGTGCAGGAAGCAGAGAGGTACAAGGCAG AGGATGAGGAGGTGAAGAAGAAGGTTGATGCCAAGAACGCTTTGGAAAACTATGCTTATAACATGAGGAATACAGTGAAA GATGAGAAATTTGCAGGGAAATTGGATGCTGGAGATAAGCAGAAGATTGAGAAGGCTGTTGATGAGGCAATTGAGTGGCT TGACAGGAATCAGCTGGCAGAAGTGGAGGAATTTGAGGACAAATTGAAAGAGTTGGAGGGATTGTGCAACCCAATTATTG CCAAGATGTATCAAGGTGCTGGTGGAGATGTGCCTATGGGTGGTGCAGGTGACATTCCTAATGGTGGCTATGGAAAATCG TCTACTGGTGGCACTGGTGCTGGGCCTAAGATTGAAGAAGTTGACTAA
CDS sequence (LotjaGi3g1v0347100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCAAGGCAGAAGGAAAAGCTATCGGCATTGACCTCGGCACCACCTACAGCTGCGTCGGCGTATGGCAAAACGA CCGCGTCGAGATCATAGCCAACGACCAAGGCAACAGAACCACCCCTTCCTACGTCGCATTCACCGACACAGAGCGTCTCA TCGGAGACGCAGCCAAGAACCAAGTCGCCATGAACCCGCAGAACACTGTCTTCGACGCCAAACGCCTCATCGGCCGCAGA TTCTCCGACCCATCTGTGCAAAGCGACATGAAACACTGGCCTTTCAAGGTGGTTCCCGGCGCCGGCGAAAAACCCATGAT CGCCGTCAACTACAAAGGCGAACAGAAGCAGTTTTCAGCTGAAGAGATTTCTTCAATGGTGCTGACAAAAATGAGGGAAA TCGCAGAGGCTTTCTTGGGGCAGAGTGTCAAGAACGCGGTGGTTACTGTCCCTGCTTACTTCAATGATTCGCAGAGGCAA GCCACGAAAGACGCCGGCGCCATTGCTGGACTCAACGTGCTGCGGATTATCAATGAGCCAACTGCTGCTGCAATCGCTTA TGGTTTGGACAAGAAGGCTTCGAGCAGCGGCGAGAAGAATGTGCTCATCTTCGACCTCGGTGGTGGCACGTTTGATGTTT CTCTCCTCACCATTGAGGAAGGGATTTTCGAAGTGAAGGCTACTGCAGGGGACACCCATTTGGGAGGTGAAGATTTTGAC AACAGGCTTGTGAGTCACTTCGTTGCAGAGTTCAAGAGGAAGCACAAGAAGGATATCAGTACCAATGCTAGAGCTTTGAG AAGATTGAGGACTGCTTGTGAGAGAGCCAAGAGGACTCTATCTTCGACTACTCAGACAACCATTGAGATTGATTCTCTTT TTGAAGGGATTGATTTCTATTCAACTATTACAAGAGCGAGGTTTGAGGAGTTGAACATGGACTTGTTCAGGAAATGCATG GAGCCTGTTGAGAAATGTTTGAGAGACTCCAAGATTGATAAGAGCAATGTTCATGATGTGGTTCTTGTTGGTGGATCAAC TAGGATTCCAAAAGTGCAGCAATTGCTTCAGGATTTCTTCAATGGGAAAGAGCTTTGCAAGAGTATCAACCCTGATGAGG CTGTTGCATATGGAGCTGCAGTGCAAGCTGCTATTCTGACAGGTGAAGGGAATCAGAAGATGGTGCAGGAAGCAGAGAGG TACAAGGCAGAGGATGAGGAGGTGAAGAAGAAGGTTGATGCCAAGAACGCTTTGGAAAACTATGCTTATAACATGAGGAA TACAGTGAAAGATGAGAAATTTGCAGGGAAATTGGATGCTGGAGATAAGCAGAAGATTGAGAAGGCTGTTGATGAGGCAA TTGAGTGGCTTGACAGGAATCAGCTGGCAGAAGTGGAGGAATTTGAGGACAAATTGAAAGAGTTGGAGGGATTGTGCAAC CCAATTATTGCCAAGATGTATCAAGGTGCTGGTGGAGATGTGCCTATGGGTGGTGCAGGTGACATTCCTAATGGTGGCTA TGGAAAATCGTCTACTGGTGGCACTGGTGCTGGGCCTAAGATTGAAGAAGTTGACTAA
Protein sequence (LotjaGi3g1v0347100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASKAEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRR FSDPSVQSDMKHWPFKVVPGAGEKPMIAVNYKGEQKQFSAEEISSMVLTKMREIAEAFLGQSVKNAVVTVPAYFNDSQRQ ATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKASSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD NRLVSHFVAEFKRKHKKDISTNARALRRLRTACERAKRTLSSTTQTTIEIDSLFEGIDFYSTITRARFEELNMDLFRKCM EPVEKCLRDSKIDKSNVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILTGEGNQKMVQEAER YKAEDEEVKKKVDAKNALENYAYNMRNTVKDEKFAGKLDAGDKQKIEKAVDEAIEWLDRNQLAEVEEFEDKLKELEGLCN PIIAKMYQGAGGDVPMGGAGDIPNGGYGKSSTGGTGAGPKIEEVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 393 | 390 | 0.0 | ||
| PANTHER | 4 | 393 | 390 | 0.0 | – | |
| SUPERFAMILY | 8 | 191 | 184 | 2.22E-72 | ||
| PRINTS | 8 | 21 | 14 | 2.7E-64 | – | |
| Pfam | 9 | 389 | 381 | 4.0E-186 | ||
| CDD | 9 | 387 | 379 | 0.0 | – | |
| Gene3D | 10 | 384 | 375 | 7.9E-181 | – | |
| ProSitePatterns | 12 | 19 | 8 | - | ||
| PRINTS | 36 | 48 | 13 | 2.7E-64 | – | |
| PRINTS | 58 | 66 | 9 | 2.7E-64 | – | |
| Gene3D | 71 | 118 | 48 | 7.9E-181 | – | |
| PRINTS | 146 | 166 | 21 | 2.7E-64 | – | |
| Gene3D | 192 | 371 | 180 | 7.9E-181 | – | |
| SUPERFAMILY | 197 | 388 | 192 | 7.41E-70 | ||
| ProSitePatterns | 203 | 216 | 14 | - | ||
| PRINTS | 209 | 219 | 11 | 2.7E-64 | – | |
| Gene3D | 235 | 312 | 78 | 7.9E-181 | – | |
| PRINTS | 337 | 353 | 17 | 2.7E-64 | – | |
| ProSitePatterns | 340 | 354 | 15 | - | ||
| PRINTS | 369 | 389 | 21 | 2.7E-64 | – | |
| Gene3D | 386 | 489 | 104 | 4.0E-38 | ||
| Coils | 391 | 411 | 21 | - | – | |
| Pfam | 392 | 488 | 97 | 4.0E-11 | ||
| PANTHER | 393 | 501 | 109 | 0.0 | ||
| PANTHER | 393 | 501 | 109 | 0.0 | – | |
| SUPERFAMILY | 413 | 492 | 80 | 4.58E-32 | ||
| Coils | 458 | 478 | 21 | - | – | |
| MobiDBLite | 497 | 525 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0347100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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