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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR029048
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 164 results. Now displaying 1 of 4 with 50 rows per page. This search has taken 5.892s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0048139.1
n.a. Heat shock protein [Medicago truncatula] gi|357502753|ref|XP_003621665.1| chr0 16159631 16163307 -
3 domain predictions
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Lj0g3v0059009.1
n.a. Heat shock protein [Medicago truncatula] gi|357502753|ref|XP_003621665.1| chr0 19484762 19488438 -
3 domain predictions
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Lj0g3v0059079.1
n.a. Heat shock protein [Medicago truncatula] gi|357448685|ref|XP_003594618.1| chr0 19498174 19500171 -
3 domain predictions
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Lj0g3v0059099.1
n.a. Heat shock protein [Medicago truncatula] gi|357502753|ref|XP_003621665.1| chr0 19506810 19508687 -
3 domain predictions
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Lj0g3v0059119.1
n.a. Heat shock protein [Medicago truncatula] gi|357502753|ref|XP_003621665.1| chr0 19521698 19523457 -
3 domain predictions
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Lj0g3v0066929.1
n.a. Heat shock protein [Medicago truncatula] gi|357448691|ref|XP_003594621.1| chr0 23642888 23643233 -
3 domain predictions
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Lj0g3v0116859.1
n.a. PREDICTED: probable mediator of RNA polymerase II transcription subunit 37c-like [Cicer arietinum] gi|502110465|ref|XP_004493886.1| chr0 51471995 51475012 +
3 domain predictions
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Lj0g3v0127699.1
n.a. Heat shock protein [Medicago truncatula] gi|357503367|ref|XP_003621972.1| chr0 57608621 57609025 -
3 domain predictions
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Lj0g3v0174959.1
n.a. Heat shock protein [Medicago truncatula] gi|357503367|ref|XP_003621972.1| chr0 84442712 84443453 +
3 domain predictions
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Lj0g3v0174979.1
n.a. Heat shock protein 70-3 [Medicago truncatula] gi|357503375|ref|XP_003621976.1| chr0 84446882 84447371 +
2 domain predictions
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Lj0g3v0188709.1
n.a. Heat shock cognate 70 kDa protein [Medicago truncatula] gi|357449647|ref|XP_003595100.1| chr0 92237922 92239488 -
3 domain predictions
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Lj0g3v0197419.1
n.a. Heat shock protein [Medicago truncatula] gi|357502753|ref|XP_003621665.1| chr0 96276636 96278120 +
3 domain predictions
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Lj0g3v0211099.1
n.a. Heat shock protein [Medicago truncatula] gi|357502753|ref|XP_003621665.1| chr0 106282756 106284742 +
3 domain predictions
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Lj0g3v0256479.1
n.a. Heat shock protein [Medicago truncatula] gi|357503433|ref|XP_003622005.1| chr0 133145587 133147874 +
3 domain predictions
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Lj0g3v0273329.1
n.a. Heat shock protein [Medicago truncatula] gi|357503367|ref|XP_003621972.1| chr0 141666081 141668232 -
2 domain predictions
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Lj0g3v0273349.1
n.a. Heat shock protein Hsp70 [Medicago truncatula] gi|124361171|gb|ABN09143.1| chr0 141677543 141678062 +
3 domain predictions
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Lj0g3v0273359.1
n.a. Heat shock protein [Medicago truncatula] gi|357448685|ref|XP_003594618.1| chr0 141679242 141680991 -
3 domain predictions
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Lj0g3v0291079.1
n.a. PREDICTED: heat shock cognate 70 kDa protein-like [Glycine max] gi|356569000|ref|XP_003552695.1| chr0 151117735 151120390 +
3 domain predictions
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Lj0g3v0328019.1
n.a. Heat shock protein Hsp70 [Medicago truncatula] gi|124361171|gb|ABN09143.1| chr0 171462790 171463635 -
3 domain predictions
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Lj0g3v0332999.1
n.a. Heat shock 70 kDa protein [Medicago truncatula] gi|357445057|ref|XP_003592806.1| chr0 174268966 174273797 +
3 domain predictions
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Lj0g3v0333009.1
n.a. Heat shock 70 kDa protein [Medicago truncatula] gi|357445057|ref|XP_003592806.1| chr0 174268968 174269284 +
3 domain predictions
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Lj0g3v0344479.1
n.a. n.a. chr0 180745804 180748108 -
3 domain predictions
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Lj0g3v0344479.2
n.a. n.a. chr0 180745804 180748108 -
3 domain predictions
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Lj1g3v2580570.1
n.a. Heat shock protein [Medicago truncatula] gi|357448685|ref|XP_003594618.1| chr1 29494710 29496867 +
2 domain predictions
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Lj1g3v3041540.1
n.a. n.a. chr1 34741466 34743585 +
3 domain predictions
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Lj1g3v3137770.1
n.a. Heat shock protein [Medicago truncatula] gi|357502753|ref|XP_003621665.1| chr1 35688350 35689834 +
3 domain predictions
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Lj1g3v3137780.1
n.a. Heat shock protein [Medicago truncatula] gi|357490113|ref|XP_003615344.1| chr1 35691865 35693837 +
3 domain predictions
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Lj1g3v3137820.2
n.a. Heat shock cognate 70 kDa protein [Medicago truncatula] gi|357449647|ref|XP_003595100.1| chr1 35708711 35710737 +
3 domain predictions
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Lj1g3v3137820.3
n.a. Heat shock protein [Medicago truncatula] gi|357448685|ref|XP_003594618.1| chr1 35713051 35715866 +
3 domain predictions
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Lj1g3v3217890.1
n.a. PREDICTED: heat shock cognate 70 kDa protein-like [Glycine max] gi|356567220|ref|XP_003551819.1| chr1 36446083 36448941 +
3 domain predictions
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Lj1g3v3218000.2
n.a. Heat shock protein [Medicago truncatula] gi|357503161|ref|XP_003621869.1| chr1 36479432 36483189 -
2 domain predictions
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Lj1g3v3218180.2
n.a. n.a. chr1 36567661 36569165 +
2 domain predictions
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Lj1g3v3219230.1
n.a. PREDICTED: heat shock cognate 70 kDa protein 2-like isoform 1 [Glycine max] gi|356568992|ref|XP_003552691.1| chr1 36582599 36585548 -
3 domain predictions
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Lj1g3v3219240.1
n.a. PREDICTED: heat shock cognate 70 kDa protein 2-like isoform 1 [Glycine max] gi|356568992|ref|XP_003552691.1| chr1 36583188 36585548 -
3 domain predictions
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Lj1g3v3458490.1
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr1 40065310 40067392 +
3 domain predictions
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Lj1g3v3718110.1
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr1 42888984 42890927 -
3 domain predictions
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Lj1g3v3718120.1
n.a. Heat shock protein [Medicago truncatula] gi|357503367|ref|XP_003621972.1| chr1 42889209 42891913 -
3 domain predictions
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Lj1g3v3718120.2
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr1 42889209 42893868 -
3 domain predictions
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Lj1g3v4550110.1
n.a. PREDICTED: probable mediator of RNA polymerase II transcription subunit 37c-like [Cicer arietinum] gi|502110465|ref|XP_004493886.1| chr1 53678592 53681524 -
3 domain predictions
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Lj1g3v4865370.1
n.a. Heat shock protein [Medicago truncatula] gi|357445271|ref|XP_003592913.1| chr1 59035358 59038312 -
3 domain predictions
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Lj1g3v4921040.1
n.a. Heat shock protein 70 (Hsp 70) family protein [Theobroma cacao] gi|508719590|gb|EOY11487.1| chr1 59808742 59811863 +
3 domain predictions
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Lj2g3v0915000.1
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr2 14406705 14412536 -
3 domain predictions
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Lj2g3v0915010.1
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr2 14406811 14412539 -
3 domain predictions
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Lj2g3v3150870.1
n.a. PREDICTED: heat shock protein 105 kDa-like [Glycine max] gi|356553571|ref|XP_003545128.1| chr2 40697666 40699241 +
3 domain predictions
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Lj3g3v0150720.1
n.a. PREDICTED: 97 kDa heat shock protein-like [Glycine max] gi|356556102|ref|XP_003546366.1| chr3 1168498 1174104 -
3 domain predictions
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Lj3g3v2062810.1
n.a. Heat shock protein 70B [Theobroma cacao] gi|508778858|gb|EOY26114.1| chr3 26558172 26560400 -
3 domain predictions
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Lj3g3v2282430.1
n.a. PREDICTED: 97 kDa heat shock protein-like [Glycine max] gi|356522017|ref|XP_003529646.1| chr3 27922976 27929495 -
3 domain predictions
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Lj3g3v3188570.1
n.a. PREDICTED: heat shock cognate 70 kDa protein-like [Glycine max] gi|356539018|ref|XP_003537997.1| chr3 39337260 39339927 +
3 domain predictions
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Lj4g3v0119600.1
n.a. n.a. chr4 1054584 1063157 -
3 domain predictions
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Lj4g3v0119610.1
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr4 1057930 1062265 +
3 domain predictions
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