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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0417900 |
| Transcript ID | LotjaGi3g1v0417900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NAD(P)-binding Rossmann-fold superfamily protein; TAIR: AT1G72640.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic; TrEMBL-Plants: tr|I1MJX7|I1MJX7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0417900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:82439209..82443523) extracted from Lotus japonicus Gifu genome v1.2.
TATCAATGAAATGGCACCTTGGAAAGAAATGCGTTATCCATTCTCGCGGGAAGAAACGGTTGGAGGAGCGTGACACTGCC AACAATGGTGTTGTTGGTTTGTGCTGCTAAGCCTTCTTCCACGCTTTTACTCCAAAACTTTGCTCCTTTCACTTCCCAAA GTTCAAGAACAGTGTTTGGTTCCCCTTTCCAATTCACCAGAGAGAATGGTTCTGTTGTTCCACTTCTTGTTGTGTGTCAT GCCAAGAAGAAAATCAGCTTTGTGGATCAAATTCTTGATTACATTGAAGGTGGATGGATAATTTCTGCACATACCCCCCA ATCTTTTTGTTTTCCCAGTTCTGCTAATTGTCTTTGATTCTCTGTTCATTTCTAGGAGGTCCCAAATTAAGGAAATGGTA TGGTGCACCTGATCTTGTTCCAAAAGATGGTCCTGCCACAGAGGATAGTGAAGATGATTTTCCTGGTAATTAAGTATGGC ATAGTGATCTTTGATTATGAATGCTTAGATTTATATGGTTATCTAGCTATCTTGGTTTTTAGCATTAGTGATTTTGTTCT GACTCAATTGTTTCAAAGCAGATGAAGTAAGGGATGCAGTGCTGGTAACAGATGGGGACAGTGAGATGGGTCAGGTCTGC TTATAATTATGTTCTACTCATAATCTTGATTGATTTCCATTAATAATTAAATTCTGACTTTTTGAGCTGTGTTTTCTGGT TTATGTAGATGGTGATATTGCAATTGATTGTGAAGAAAGCTCGAATAAAGACACTGGTGAAGGATAAACGGGTTGCACTT GAAGCCTTTGGAAATTATGTTGAGGTGAGTGAGGTTTTTTTGCAAAACCAATAATATATAGTAACTATGTTGTTGTTTGG GAACTCATTATTGATTACAAGGTGCTTGTTGCAAAGTCAATGGCAGGTGATACAAAGGACAATCGATTCCTGAAGAAAGC TCTGAGAGGAGTTCGCACAATTATATGCCCAAATGTATGTATACCTTGCCATGCTTCTAGACATATTTGTAAGCTCCGTG AGACAAATCAACAAGAGATGAGACAAATAAATAAAACCATTCATAAGCCGGATTTGCTTATTTCATAGTTTTTCAATGAA GTTTAGCTTTCTGTCAAGGCTATACTCATTTTTCTGTATGGAAAGAGTGAAGTTTCTCTTCTGATAAGCAGGTAACATAA GTCACTGCTATACAAGATTAGATTTCATTGTAGAATCCCAGATCACCTTAGCAGAATTAAAATTGACAATTGATGATTCA TTTTAGCTTATTAGAAGAAGATAGTCTGGACTTGTACTATGAAAAGTGAATTTGTTTGGTATTAAGCAATGATCACCATA ATTTTGTATGAAATGACCAGCAGAGAATCAATTGTATGCAGGATACCTTGGTCTTGTTCAACTGAATAGACATAGAGCAT GTTTGGTTCAGCTTATTTTCTCTCTGAATCAATTCTAGCACTTAGAAGCTACCCACAGTGTGACAATAGCTTCTCCCTAG ATTGATTTTAACTGTAAATTCAATTTTAGAAGAATTTCCTAACATGCTAATGGTTAGTGCATGTATATGTGCTGTTCGAT ACTTGAAAAGAGGGAATCAATTGACTCCTAGTAAAACAGTTCATTTTTCACTTGAAACTATTTCCACTCCATTGAATTAT TTCATTATTTTTCTAGGAGGGTTTTCCTTCCAGCGTTGGGAGCCTTCAAGGGGTACAACATGTAATCTTCTTATCACAGG TACTTTTTCTTTCTTTTCTTATACATACAGTACTTCGCGCCACGAAAGTTAATATTCGTTTTGTTTTAAGTTTTAACAAA GTTGCAGTTGTCAGTTTATAGTGGTAAAAGTGGCATTCAATCTATGATGAAAAGCAATGCAAGGAAATTGGTAGAGCAAG ATGAATCAGCATTGGTGACCTCCGGAATTCCTTACACGATCATTAGAACCGGTGCATTACAAGATACACCTGGTGGGAAG CAAGGTTTTACCTTTGACAAGGTACATACTACAAGTGATAAAGGTGCTGACTATTTATAATATCATAGCCATGACTTATG GGATATTTTCTACAATAGGGTTCTGCAGCTAGTGGAAGTATTAGCAAAGAAGATGCTGCTTTTGTGTGTGTAGAAGCCTT GGAGTGTATCCCTCAATCTGGATTCATATTTGAGGTGGCAAATGGGGAAAACAAAGTTTCAGATTGGAAAGAATGTCTAG CAGCGTTGATGGAGAAAGCGAGTCAGCAAACTTAGTCACCATTCACAAGGCAAGGCATGTGTATCTCTGTTTTAATTCTT TATGTGTAGGATGTTCTCAAATGGGTTTGTGCTGTACTCCATTTGAGAAAGGCGGGCTTTGTGATTTTTCTCACCTTTTA GTGAACAAAATTGATGGTTTTGAGACTAGAACTGCATATTTTAATTTACTTCCAGTCACTAAAAAGGCAAGAACTCGGTA GCTTCTCTATTAGTAAAACTTTTCATCCAGTTTAACTACTTAGGAAGTAGATGAAAGATAAGTAAGCTCATGCATGATGT TATTCAAAAGTTTCCCCAAAATTCATTTTGATGTCAAGACTTTGAGCACGAGGTCGATTCTGCTGCGCTAAGAGAATGAA GACAATGTCTACAATGTATCCATGTCTCCCCCTCCACTTTCAGTTTCCAATATCCATTGTTAATCCTCAATTCCCCTCTG CATCAACGTTTGTGGAATCCAGTTGGTCGACATCTTCATTATATTCTTCGGTCCTGCAACATTCCCCTTTCCAACAAATG TAAAGTTCTCCATTATTTTTATTGTTCAATGAAAAAAAGTTACAAGTTCCCCTTTTCTGGTTCAAGTTTAAAACATTTTC TACCTTTTGAGATATGTACTCTGATGTTTGGGTCCATCTTCTATTATAGAGAATCTATTACTTTATTCTATACCAGACTT AAAAACAAGGTTAAACTTAAATATGTTTGTAGTCCCCAAAAATTAAGCAAATATTATTGGCTTTAGCCCTGAAAAAACAT TTCTTAGTTTTTAATCCTTTTATCTGTTCTAGTTCTTACTGTTATGTTTTGCTTATGTGGCTCACAAAATGATGACTCAC CCTCTTGGAGTTGTTTTTTCTTATATAATTTGTCATTGTGGAACTCACCCATATAAATAGGGAAGAGTTTTGGACCCTAT TGTTGATGGAAATTTCCCGACGAGAGATATGAAACCGTGACGGTGAGCCTAGCTACGACGGTGATGGAAGTGGTGGGTGT GGATGAGTGAGTTCCGTTGTGCAAAATTAGATAAAGAAAACCCCAAGTAAAAAGGGTGAGTCATCATTCCATAAGTCACA TAAGCAAAATTTAACGGCAAAGACTTAAACCAATAATAATGTATATTTTCAGAGATTAAAAACTAATAAATATTTTTTAG GGACTCAAACCAACATTTGATTAATTTTCAGGGACTAAACATATTTCAGCCTAAAAACAATCAGCTGGCACCAGATTCTG GCAGAAGCTGAATCTCACCTACCACAAACGAACAAAGATCAAAACAAAATATGAATTTCATTTGAGCAATATTGTGTTAG ATGTTGAATTGTAATATGGATGGTAAAAAAAAAATACTGATCTACAGGATGACCTTTATTAACGATCGAGGCCTGTTTTA AAAAAGGTTATTTTATGATTGTGCAGAAATAATTTCTTTTTATAGATTATATCTTGACATTTGCAAATTACAACAAGAAG GCTACAATGTAACTTTTGTTTGAGGAATAATTTTTGCACACACTAAACTTACTACTTACACATCCTAAACATTTTTCTTC AAAACATACCCTTAAAATGAGTACAGACACCCCTTGACCTCTTTCAGAAATAAACTTTCGGGATAAAACTGTTATCTACA CTTGCAGGGAGGGGGTTCTCTACAGTACGACGAAGGGATGGGGAGACACAGATAGGCTGAGTGGACCAGACAAACTGTGT AATAAAATTGGTAGTACATGAACAAGTCTGGTTTACTGATCCAGATCACGCCACCGTGGAAGTGGAGGAGTATGGGTAGC TTGTCTCTAGTGTTTTCTCTATCATGTATTAACAACGGATTTGGGATCATGGAGATCCCGGAGAAAATTGAGTCTGAAAA CAGGGTGTGTGATTAAGATATACTCCCTCCGGTCCTATTTATAAGCATGAAAGAGAAGAAAAATCTTGGTCCTTTTTATA AGAACCAAATGAAAGTTTGAGCTATATTAATAATTTTTTTCCAATGATGCCCTTATTAATTCTAACTTGTAGAAT
CDS sequence (LotjaGi3g1v0417900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGTTGTTGGTTTGTGCTGCTAAGCCTTCTTCCACGCTTTTACTCCAAAACTTTGCTCCTTTCACTTCCCAAAGTTC AAGAACAGTGTTTGGTTCCCCTTTCCAATTCACCAGAGAGAATGGTTCTGTTGTTCCACTTCTTGTTGTGTGTCATGCCA AGAAGAAAATCAGCTTTGTGGATCAAATTCTTGATTACATTGAAGGAGGTCCCAAATTAAGGAAATGGTATGGTGCACCT GATCTTGTTCCAAAAGATGGTCCTGCCACAGAGGATAGTGAAGATGATTTTCCTGATGAAGTAAGGGATGCAGTGCTGGT AACAGATGGGGACAGTGAGATGGGTCAGATGGTGATATTGCAATTGATTGTGAAGAAAGCTCGAATAAAGACACTGGTGA AGGATAAACGGGTTGCACTTGAAGCCTTTGGAAATTATGTTGAGTCAATGGCAGGTGATACAAAGGACAATCGATTCCTG AAGAAAGCTCTGAGAGGAGTTCGCACAATTATATGCCCAAATGAGGGTTTTCCTTCCAGCGTTGGGAGCCTTCAAGGGGT ACAACATGTAATCTTCTTATCACAGTTGTCAGTTTATAGTGGTAAAAGTGGCATTCAATCTATGATGAAAAGCAATGCAA GGAAATTGGTAGAGCAAGATGAATCAGCATTGGTGACCTCCGGAATTCCTTACACGATCATTAGAACCGGTGCATTACAA GATACACCTGGTGGGAAGCAAGGTTTTACCTTTGACAAGGGTTCTGCAGCTAGTGGAAGTATTAGCAAAGAAGATGCTGC TTTTGTGTGTGTAGAAGCCTTGGAGTGTATCCCTCAATCTGGATTCATATTTGAGGTGGCAAATGGGGAAAACAAAGTTT CAGATTGGAAAGAATGTCTAGCAGCGTTGATGGAGAAAGCGAGTCAGCAAACTTAG
Protein sequence (LotjaGi3g1v0417900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLLVCAAKPSSTLLLQNFAPFTSQSSRTVFGSPFQFTRENGSVVPLLVVCHAKKKISFVDQILDYIEGGPKLRKWYGAP DLVPKDGPATEDSEDDFPDEVRDAVLVTDGDSEMGQMVILQLIVKKARIKTLVKDKRVALEAFGNYVESMAGDTKDNRFL KKALRGVRTIICPNEGFPSSVGSLQGVQHVIFLSQLSVYSGKSGIQSMMKSNARKLVEQDESALVTSGIPYTIIRTGALQ DTPGGKQGFTFDKGSAASGSISKEDAAFVCVEALECIPQSGFIFEVANGENKVSDWKECLAALMEKASQQT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 20 | 20 | - | – | |
| PANTHER | 12 | 310 | 299 | 7.9E-138 | – | |
| Gene3D | 103 | 307 | 205 | 2.2E-20 | – | |
| SUPERFAMILY | 105 | 291 | 187 | 6.72E-12 | ||
| Pfam | 114 | 275 | 162 | 1.5E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0417900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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