Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0433500 |
| Transcript ID | LotjaGi3g1v0433500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-acyltransferase; TAIR: AT3G60800.1 DHHC-type zinc finger family protein; Swiss-Prot: sp|Q8VYP5|ZDH14_ARATH Probable protein S-acyltransferase 14; TrEMBL-Plants: tr|G7JDF8|G7JDF8_MEDTR S-acyltransferase; Found in the gene: LotjaGi3g1v0433500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:84506736..84510374) extracted from Lotus japonicus Gifu genome v1.2.
ATGCATAGATCTGGAGCTACGATGGCTTGGAACGTGTTCAAGTTCTGCACTGCTCTGCGAGGACTGGGCTCGATCATGAT CCTATTGGTCCTTGGTGTCGTTGGTGTTACCTACTATGCTGTTGTTGTCACCAATTACGTCCCTGCTTTGTATGCTGGAG GGCTTGATTTTCTTATTTCCATGCTGGTGTTGATCTTGTTTCATGCTTTGGTAAGCTTCCTGAGCTGTTTTTTTGTTAGT GTTTTTGAATTGCTTTGGAAGTTCAGGCTATGATGATTGTCAATTTGTTTGAATTTAGTTGCTGCAAACAGAAAATGGGT GTCACTTGGGAATTTATATGATGGGCTAGAGTGTGTTAATTTGAAGATGATACTGCAATCTATGAGTTTTCATTAGCTGG GAATTCATTTTATTTTAGCCTTTAATGTGGCGTAATGATTTTCGTCTGCTGTTAAACTTGATTAGTTTTACAGATTAAGG AGGTGTTGTTTCTTCAGTATGTGAATGAAGTGTTTGTGATAATTTGGATTTTTTTTCTCATGATTATTATGCAGTTGGTT ATGCTATTGTGGAGTTACTTTTCTGTTGTATTTATTGATCCGGGAAGTGTACCACCAAACTGGAGGCCTAAAGTTGATGA AGAAAGAGGAGAGGCTGACCCATTAGTTGGGTCAGAATTTAGTAATGTGCAGAGTGATTCGTTAAATGAACGGACACGGT ATTGCCGGAAATGCACCCAGCTTAAGCCACCTCGATGCCATCATTGTTCAGTTTGTGAGTTTTAGGCACAGATGTTTCCA TTTTTGTATTGCCACGTTGAAAATAAGTAAGCATAATTCGATATTTTTTGGTTTGAAACCAGGTGGGCGTTGTGTGCTAA AGATGGACCACCACTGCGTGTGGGTTGTTAACTGTGTTGGAGCGCTAAATTACAAGTATTTTCTTCTTTTCTTGGTATGA ACACCTTAGCTGGAGTTATTATTTTGGCATCAATTTATTATTGAGCACTATTACTTTCTAGTGCGATGATTGTATTTGTC TTCCATGACTTGCTGTAGAACTGTGCTAATAATCTTGTGATGTCCTCCATTTTATTTTACTTCTTGGGTTCAGTTAATTT TGGGTTAGATGTACAAATATGCACATGCTAGTTCTTAACTGTACCATGGTTTAAAATTGTCCTTTTCTTGTGTGAGTTCA TTAATATAGCCTATTAACCATGCTATTGAAATTTCAAATGCAAATCAAACCCTTTGTTTTAGAATTGAATGGATACTCAT ATTCTGGTCTGTCCCAGTGATATTCATGTGCAATGGTGCTATACTAGTAGTGGTGAATTGAAAGTGGAACTTATTTATGA CAATGCAGAGTTGGTAACTAATAGGAGACTGTTGTTCCTAATGATCATGTTTCATGACTTAGCCTAAGCTTTACTCTCAG AATAATTGAGCAACTGGAAGTTGCAGTTTTATAATTTCCCAATCTTAACTATACATGTGGTCAATAACATTCTTTGGATC GCTAGTGTGATTGTAATGGTGATATTGGTTGTTTCTTCTGATTTGTCTCCTTGCGTGCAATAGTGGATGCCGCTCTTTTT CATAAGCGTAAGGAAGTGAAGGAACAGAGACTTTTTAATCCTAATTCCAGTAGACAGATTGATATGAATCGTATTGTAGG TCCTAGCATTATTAGATGTTTTGGTAGTGACCATGTTAAGGCTAACTAAGCAGTAAATTTTCTTCTGGCATTTTTGCTTT TAAAGATATTATAGCTGTGATTGTTGTTCATGTGTCAATAGTATAAAGTGTATGATTTGACATGTAGTAAGTCTTCAAAT TTTTGGTGTTACTATGTCAATATAAAAACTTTCCTTGGTTTATATGATTTGATTAAATCTTCGTGCAGTTCTACACCTTC CTTGAGACAACTCTTGTGACTGCATCCTTACTGCCACATTTCATAGCGTTTTTTAGTGATGGAGAAATTCCTGGAACGCC TGGATCTCTTGCTACAACTTTTCTTGCTTTTGGTAGGGTCCCTAAATATTGTTAGCTGTTGGTTTCATTGTGAATTTATG TAACAATATTTTATAACCTGCAGTTTTGAACCTGGCTTTTGCATTGAGTGTCTTGGGATTTCTTATTATGCACATATCAT TGGTGGCTGGTAATACGACCACTATTGAGGTAAACTTTTGTGTATAAATTAGCTTGAAACATTGTTTTTTTGTTACTTTT TCGTGCTCCTTTTGTTTGTGATCTCTTATACTTTTTCTGACCTTTTACTTGAGGAAACTTTTCTGACTCTAGTTGAATGA CAGTATTTAGTTACATTTAAATTAATGAACAACTTTTATACGTGAACTGTATCCTCTGGTGCAGAGGGTAAATGCCGTGT GTGTGCGCGCTTGTTGTGAAAATGTTCCAATATTCTTCTACATAACACTTTCATATGCTTCCTTATTGCGTGAAGCATTG CCCATGTGAAGTGGGTGCTGATAAATTCTTTGTTCATTGTGAGCAGGCATATGAGAAGAAAACTACTCCAAAATGGCGGT ATGATCTTGGTCGTCGAAAAAATTTTGAACAGGTTTGTATGTGCTGTATAAAAAATTCTTTTGGAACATTGTTTTATATC GCAATATTTTTTTATGTTCTCTATGGTTGACTTTCATGCCAACTCTAAAAAAAATCATTGATAAATGGTGTCAATATCTC TCTTAGGGATTCTGTTTGTATCTTAAATAAATTTTTAGAATTTGTGTTTTTTATGTTAATCCTATACTTCATACCCTAAT CATTCTGTATCCTAAGAATAATGTTGATATATAAGTATAAAATCATTCATGTGGGTGTGCCTAGGCCTTATTTACCTTCA CTCCCGACTCAATAGGCTCTTGTGTAGTGAAAATGTTAGAGATGTAAACGTATAATCCCATTCATGTTGGATCCTTTCGG GTTCTTGAATGACATGGTATGGTCTTCTTGGATGGAAATTACACACATATCTTATAAGAAAATCATGGAAGGTCCTGAGA ATATAAAAATTGTATATCTTTAAAATAGGCTAAGTCACGTGGTGATTCAAGAACTGAAATCTGCTTTTGGGATTGTTGCT TCATGGAAAATAATTATATATTTGTGGACCTTGTGAATTTGGTATTTTCCTTTTGGATTCGCTGGGTATATGGTTGCTGG GGTACTCTTATTCTGTTATTATTATGGAATAATATGGGATCTTGCAGTTACATCGTATTTATGTTGGTTTGATATCAGGT TTTTGGGATGGACAAGAAATACTGGTTCATCCCTGCATATTCAGAAGAAGACATACGAAGGATGCCAGCTCTACAAGGTC TCGAGTATCCATCAAAACCCGACTTCGATTCCCAGTAGTCCTAAAGGCCAGTATATACACTTCATGTAACAAAAGACATG CAGACTCCAGAACCCTCTAAATTCACACTCTAACAAAATCTATCGTGTAAGTAAAATCCAGGCTCCTAGCAATTCATCTG CTGCACAGACACATGGTGTGATTTAAAAAAAAATGTTTTGTGAAGGTGTCTGTGCCAAGTTGAAAGGAAAGGAGCAATGA GGGGGAAGGAACATATGGACGGGTTGTGTTTGTCTTTGA
CDS sequence (LotjaGi3g1v0433500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATAGATCTGGAGCTACGATGGCTTGGAACGTGTTCAAGTTCTGCACTGCTCTGCGAGGACTGGGCTCGATCATGAT CCTATTGGTCCTTGGTGTCGTTGGTGTTACCTACTATGCTGTTGTTGTCACCAATTACGTCCCTGCTTTGTATGCTGGAG GGCTTGATTTTCTTATTTCCATGCTGGTGTTGATCTTGTTTCATGCTTTGTTGGTTATGCTATTGTGGAGTTACTTTTCT GTTGTATTTATTGATCCGGGAAGTGTACCACCAAACTGGAGGCCTAAAGTTGATGAAGAAAGAGGAGAGGCTGACCCATT AGTTGGGTCAGAATTTAGTAATGTGCAGAGTGATTCGTTAAATGAACGGACACGGTATTGCCGGAAATGCACCCAGCTTA AGCCACCTCGATGCCATCATTGTTCAGTGGGCGTTGTGTGCTAA
Protein sequence (LotjaGi3g1v0433500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHRSGATMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVVTNYVPALYAGGLDFLISMLVLILFHALLVMLLWSYFS VVFIDPGSVPPNWRPKVDEERGEADPLVGSEFSNVQSDSLNERTRYCRKCTQLKPPRCHHCSVGVVC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 6 | 143 | 138 | 4.1E-70 | – | |
| PANTHER | 6 | 143 | 138 | 4.1E-70 | – | |
| TMHMM | 21 | 43 | 23 | - | – | |
| Phobius | 21 | 41 | 21 | - | – | |
| Phobius | 42 | 60 | 19 | - | – | |
| TMHMM | 58 | 80 | 23 | - | – | |
| Phobius | 61 | 84 | 24 | - | – | |
| Phobius | 85 | 147 | 63 | - | – | |
| ProSiteProfiles | 125 | 147 | 23 | 10.148 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0433500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…