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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0450800 |
| Transcript ID | LotjaGi3g1v0450800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14-3-3 protein-like protein; TAIR: AT2G42590.2 general regulatory factor 9; Swiss-Prot: sp|P42654|1433B_VICFA 14-3-3-like protein B; TrEMBL-Plants: tr|I3SI06|I3SI06_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0450800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:86427708..86431653) extracted from Lotus japonicus Gifu genome v1.2.
CTTAACCCAAACACAAAAATACAAATCAATCAATTTCCAACTAAGCTCAATTAGCCATAGGGTTTCACGCGACATGTTCG ATGATAACACCGAAGATTGTCACATGACACGTGGATTAATCCAACTGGTTAGAAATCCAGTTTAGTCTACGCTCACGCGC ATGTAAGCATGTCCGTAACGAAAAAGCAGGGACATATCTGACATTTCACTCCCCCACTCTTTCTCTACAGAACCTCGACC AAGAAGAAGTAACAGACACAGAGAGAGAGAGAGAGAGAGAGAGAAATTCAGATTCTGCAATTCGAAACCCTAATTTTGAA GAAATCGATCGGTGGTCATGGCTTCTTCCAAGGATCGCGAGACCTTCGTCTACGTCGCCAAGCTTGCAGAGCAGGCTGAG CGATACGAAGGTTAGCGTTTCTTCCTTCGTGTCACTGCCTTGTTCGTGCAAATCGATTTGCTTGATTTCGTTGATTCCTA CTCATGCGATGCTTCGTTGAACTTCTTTTGAGTAAATTTATGCTCTTTTTCTTCGATTTTATATCGTTATAGAGTTAATT TTTATTTTTGGAAAATTGGATCAGTGTTTACTGTCAGTTTGAATTCCAAGGAGACTATAAGAAAGGGCTTTAGTTAGGGT TAAGAGCCCTTTAACAGGAATTTAGTTTTTCAGTATTTTTATTTAATTTCTGTCAAAGTTTGTTCATTTTGAGCATGTGG GCATGTTGCTAATTCAAAATTTTGGTACTCTGCATGTTCAAGTGGTGGCATGATACTTAGGGTGTTTGAGTGTTTTTGTT GATCAAAGCATGTTGTTGTTCTTCCTGTGGAATTTTGTTATATTTGAAGGTTGATTTATGATGTTTTTTTTTTTTTTGCA TTTGTTTTGACAGAGATGGTGGATTCGATGAAGAAGGTTGCGAATTTGGATGTTGAACTGACTGTTGAAGAGAGGAATTT GCTTTCTGTGGGTTATAAGAATGTGATTGGTGCTCGCAGAGCGTCGTGGAGGATTCTGTCTTCCATTGAGCAGAAGGAAG AGACTAAAGGAAATGATGTAAATGCGAAGCGGATTAAGGAGTACAGGCAGAAGGTTGAGTCAGAGCTTGCGGACATCTGT AATGATGTTATGAGGGTGATTGATGAACACCTTATACCTTCAGCTACTGCTGGTGAATCGACTGTGTTTTACTATAAGAT GTGAGCATTGGTGTCTTGTTCTCTGCTACAGGTTTTGGTGTGTTTTTTTTTTCTTGTTTTTTTCCAAGTGGATTGTGCGA TGATCGAATATTCTGCTTGCAGGAAAGGAGACTATTATCGTTATCTTGCAGAATTTAAGTCAGGCAATGAGAAGAAGGAG GCTGCTGATCAGTCAATGAAAGCATATGAGGTGAGATTTATATTATTATATGTTGTTTTTGCAGTTTACAGGATATGTTT GTTTACTGGGTTTGTTAAAATTAGACATTGCAGTTTACACTTGAGACTTGAGAGGTTTCTTTTGGTCTTCATTTTTTATT TTGGTCAACTAAACACACCTGTGGTTTGACCTTGGTCTTGTATTGAGTTCAAATTTCTAGTGCTTTCAAATAAGAACTTG TAATTGTTTCCTTCCTAGCATTCAATCAATATTTCCATTTGTATTTAGTTGCTTTTGTTGTATTGTATGCTCTATTTTTT TCTGAGGATCTGGCATGATATTTAACAATATCCTTCCTAGCATTCAATCAATATTTCCATTGCAGTTTACACTTGAGACT TGAGAGGTTTCTTTTGGTCTTCATTTTTTATTTTGGTCAACTAAACACACCTGTGGTTTGACCTTGGTCTTGTATTGAGT TCAAATTTCTAGTGCTTTCAAATAAGAACTTGTAATTGTTTCCTTCCTAGCATTCAATCAATATTTCCATTTGTATTTAG TTGCTTTTGTTGTATTGTATGCTCTATTTTTTTCTGAGGATCTGGCATGATATTTAACAATATCCTTATTGAAAGAGCTG TTATTCAAAGGAGTTTCCTCTTCAGAATACTTTGTCCTTCTCTTACCTCAAATTTGTGTGTTTTATATATTGCAGTCTGC TACCACTGCAGCAGAGGCTGAATTACCCCCCACTCATCCCATCCGTCTGGGCCTGGCTCTAAATTTCTCAGTTTTCTATT ATGAGATCCTGAATTCACCTGAAAGGTTGGTAGGTTTGATTTATGTACTAAACTGTGATTGTAAATTGGTTTTTTTTTTT GAATGTGGTAGAACTTATTTTCCTTCTTCCAGAGCCTGTCATCTTGCAAAGCAAGCTTTTGATGAAGCTATTTCAGAGCT TGATACCTTGAATGAAGAGTCATACAAAGATAGCACCTTGATCATGCAACTTCTCAGGGACAACCTTACTCTATGGACTT CTGACATTCCAGAAGAGGGAGGTAATTCTGACTAGAGGACTTATAGTTAACTGATTTATTACTTTGATTGGTCTAAATTC TATATTTCAATGGGTCTATTAAGATGTGTAAGAAGAGTTTGGGATAATCGGTGAGGATATGACAAGGCAAGCTGTTACTA ACAGTTATGAGATTATAACTGCTAGGTTTGAAGCTAGAGTAACTCTTAGTTAGGCACGGTCTACAATAAACACTCAAATC ATTATTGGACACTTGTGACGTTGTGGAGCCCATGGTAGAAATTCTCCTATCTCTAAATATGCATTTCAGATGTCAAATGA TGGTTTTAATGCTAGTCTCTTGAAACTGACTTTATAGGATGTTAAACACTATATATAAAGTCACCAAGACCATTAGATTT GTTGCTGAACATAATTATTTTTAAAAAAACGCAATCATGATAGTTTGTTAAGTCAATGATCTTACCATGAATAAATTATG ATATTATGTTATTTTGGTGCTCCTTTTCTATAAATGTTGACTACTATTTTCTGTCTCTGTTACAGAAGATTCCCTGAAAG CGAATGGCACTGCCAAGGTTGGCGGAGGAGAGGATGCGGAGGTGAGTAGTTAGTTTTTTCATACTTGACAGTTTACTTCC ATTGATCTTTGATGGCTTTACTTAATTCATCTCATCTCATTATTTTTTTGCAGTGAGGTTGATGACTGATGGCAACTCTC TTAAGATTTGATGCTTGTGTTTGAGAATGAAACATGAGGGTTAATTACTCATTTGTGTACTAGCTAGAGATAGAGTTTCA TTGTTTCTTTTTTTCTTTTTGTTTCATGTTGATTGGGGTCATACTTCCCGATAGGGGAAAAAGAAAAACTCCTTCATTTG TGTTATATTATGGTGATGTTTTTATTGTGTGGTGTCTAAAAATGACATGTTGTCTAAGTTTTTCCTCCCCATGGGGATTG ATTTGATGAGGATTGCTCATGATGTATTCCTATTCCAATGAAATGCTGCAACTTATATGCAATTGGAGATTGTTATTTGC GTAATAATTTTCTCTTGAATATTGCATTAGTTGCCGTTTCTGTTGCCGCGAAAAGTGTAAGTAAAAACGGTGAGAGGAAA ACCTGAAGTAAGTGGTGTGGCTGTGGTGAGAACTTAACGTAGTAATTAGGATTGTACCTATTTTATGTCTAACATAGCAA CTAGTTAGAGTGTTTTTATTAGTTTGTCTTAATGGGCAATTCTTAAAATTCTATTTTACTACTTTTTTGATTTGATAGAG ATACATACAATTTTATTGCAAGAACCTAAAGAACTGTTAAATTTAACAAAAGACCTTCATATTTTCAAGTCATGAGATGT TCATAATTTTCCTGACTATGAGTCCTACGTGAAGAACAACTATTGTATAAATTGAATCTCAATACAAGATTTACCTAGCA AGCAGCGAACACTAATACAATTTTTCAAAGCATCAAATTGATCCACATCTTTCTTAATGCCTACACAAATTATAGCTCTT GATAAGAATATGAGATAGCATGAAAG
CDS sequence (LotjaGi3g1v0450800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTTCCAAGGATCGCGAGACCTTCGTCTACGTCGCCAAGCTTGCAGAGCAGGCTGAGCGATACGAAGAGATGGT GGATTCGATGAAGAAGGTTGCGAATTTGGATGTTGAACTGACTGTTGAAGAGAGGAATTTGCTTTCTGTGGGTTATAAGA ATGTGATTGGTGCTCGCAGAGCGTCGTGGAGGATTCTGTCTTCCATTGAGCAGAAGGAAGAGACTAAAGGAAATGATGTA AATGCGAAGCGGATTAAGGAGTACAGGCAGAAGGTTGAGTCAGAGCTTGCGGACATCTGTAATGATGTTATGAGGGTGAT TGATGAACACCTTATACCTTCAGCTACTGCTGGTGAATCGACTGTGTTTTACTATAAGATGAAAGGAGACTATTATCGTT ATCTTGCAGAATTTAAGTCAGGCAATGAGAAGAAGGAGGCTGCTGATCAGTCAATGAAAGCATATGAGTCTGCTACCACT GCAGCAGAGGCTGAATTACCCCCCACTCATCCCATCCGTCTGGGCCTGGCTCTAAATTTCTCAGTTTTCTATTATGAGAT CCTGAATTCACCTGAAAGAGCCTGTCATCTTGCAAAGCAAGCTTTTGATGAAGCTATTTCAGAGCTTGATACCTTGAATG AAGAGTCATACAAAGATAGCACCTTGATCATGCAACTTCTCAGGGACAACCTTACTCTATGGACTTCTGACATTCCAGAA GAGGGAGAAGATTCCCTGAAAGCGAATGGCACTGCCAAGGTTGGCGGAGGAGAGGATGCGGAGTGA
Protein sequence (LotjaGi3g1v0450800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSKDRETFVYVAKLAEQAERYEEMVDSMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEETKGNDV NAKRIKEYRQKVESELADICNDVMRVIDEHLIPSATAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYESATT AAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPE EGEDSLKANGTAKVGGGEDAE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 247 | 247 | 3.1E-126 | ||
| PIRSF | 1 | 247 | 247 | 1.2E-119 | ||
| PANTHER | 3 | 261 | 259 | 8.4E-161 | – | |
| PANTHER | 3 | 261 | 259 | 8.4E-161 | ||
| SUPERFAMILY | 6 | 237 | 232 | 1.19E-106 | ||
| SMART | 7 | 248 | 242 | 3.3E-172 | ||
| Coils | 13 | 33 | 21 | - | – | |
| Pfam | 14 | 235 | 222 | 2.3E-107 | ||
| PRINTS | 39 | 68 | 30 | 3.4E-86 | ||
| ProSitePatterns | 45 | 55 | 11 | - | ||
| PRINTS | 88 | 112 | 25 | 3.4E-86 | ||
| PRINTS | 119 | 141 | 23 | 3.4E-86 | ||
| PRINTS | 154 | 180 | 27 | 3.4E-86 | ||
| PRINTS | 181 | 207 | 27 | 3.4E-86 | ||
| Coils | 195 | 215 | 21 | - | – | |
| PRINTS | 208 | 237 | 30 | 3.4E-86 | ||
| ProSitePatterns | 217 | 236 | 20 | - | ||
| MobiDBLite | 239 | 261 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0450800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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