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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0496300 |
| Transcript ID | LotjaGi3g1v0496300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatidylinositol N-acetylglucosaminyltransferase subunit P; TAIR: AT2G39445.1 Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit; Swiss-Prot: sp|O64792|PIGP_ARATH Phosphatidylinositol N-acetylglucosaminyltransferase subunit P; TrEMBL-Plants: tr|A0A0L9VET7|A0A0L9VET7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0496300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:91443560..91444222) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAAGTCCCCACTCTGTCAACAGTCCAAGAAGAACGCTCAGTTTGTCAAGACAGCGGAGGGCAAATTATACATCCTT TCCTGACCCAGTTGACAACAAAACCTCTGGCTTCGGATTGTCCGGTGATCATGGCCCTAAGCCTTCTGAAGTTTATGGTT TTGTAGGATCCATTAGCACTATTGTTGCTTCAGTTATTTTCTTCATATGGGCATATGTTCCAGAATCATGGCTACATTCT ATTGGCATCACTTACTATCCTAGCAGATATTGGGCTCTGGCAGTACCAACTTATGTCATGGTCACCATTGTATTAATGCT TGGATTCTACATTGGTCTTAACTTCATTTCAACTCCTTCTCCTGCATCTATATACACAGTTTTTGGTGAGTTTGCTACTC AATTCTTTGGTGATAGTGGTGTGGTGAATTTCGATTGCTAGATTACTTCATATGCTTCCTGCACATGTGTTCAGGATCTA GTGCATTGTTTGTTAGTTGAAGTTTTTTGATTACTGATATGGATATATATTTGTTCAGATGAATTCAGTAGGGATCCTCT GAGTCTTGATTGCTCGCTAGAGGGAGAGGAGAAGCCCATCGATCCTATATCTGATATTGGTATCGACAGAATCAATGATG CTATGTTCAATAGTGCGGCCTAA
CDS sequence (LotjaGi3g1v0496300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAGTCCCCACTCTGTCAACAGTCCAAGAAGAACGCTCAGTTTGTCAAGACAGCGGAGGGCAAATTATACATCCTT TCCTGACCCAGTTGACAACAAAACCTCTGGCTTCGGATTGTCCGGTGATCATGGCCCTAAGCCTTCTGAAGTTTATGGTT TTGTAGGATCCATTAGCACTATTGTTGCTTCAGTTATTTTCTTCATATGGGCATATGTTCCAGAATCATGGCTACATTCT ATTGGCATCACTTACTATCCTAGCAGATATTGGGCTCTGGCAGTACCAACTTATGTCATGGTCACCATTGTATTAATGCT TGGATTCTACATTGGTCTTAACTTCATTTCAACTCCTTCTCCTGCATCTATATACACAGTTTTTGATGAATTCAGTAGGG ATCCTCTGAGTCTTGATTGCTCGCTAGAGGGAGAGGAGAAGCCCATCGATCCTATATCTGATATTGGTATCGACAGAATC AATGATGCTATGTTCAATAGTGCGGCCTAA
Protein sequence (LotjaGi3g1v0496300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESPHSVNSPRRTLSLSRQRRANYTSFPDPVDNKTSGFGLSGDHGPKPSEVYGFVGSISTIVASVIFFIWAYVPESWLHS IGITYYPSRYWALAVPTYVMVTIVLMLGFYIGLNFISTPSPASIYTVFDEFSRDPLSLDCSLEGEEKPIDPISDIGIDRI NDAMFNSAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 50 | 50 | - | – | |
| PANTHER | 1 | 167 | 167 | 1.2E-83 | – | |
| PANTHER | 1 | 167 | 167 | 1.2E-83 | – | |
| Pfam | 49 | 165 | 117 | 1.3E-32 | ||
| Phobius | 51 | 73 | 23 | - | – | |
| TMHMM | 51 | 73 | 23 | - | – | |
| Phobius | 74 | 92 | 19 | - | – | |
| Phobius | 93 | 113 | 21 | - | – | |
| TMHMM | 94 | 116 | 23 | - | – | |
| Phobius | 114 | 169 | 56 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0496300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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