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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0509200 |
| Transcript ID | LotjaGi3g1v0509200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Isoflavone reductase family protein; TAIR: AT4G34540.1 NmrA-like negative transcriptional regulator family protein; Swiss-Prot: sp|O65679|PILR3_ARATH Probable pinoresinol-lariciresinol reductase 3; TrEMBL-Plants: tr|G7JHC4|G7JHC4_MEDTR Phenylcoumaran benzylic ether reductase-like protein; Found in the gene: LotjaGi3g1v0509200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92637244..92639902) extracted from Lotus japonicus Gifu genome v1.2.
CTTGAATTTGAAGTATATAGAACTCACTCAACCTAGGGGTTGAGAATTAATAACTGAGATTGAGAGCTGAAAGCCCAGAG TAGTGTTTGTGTTTGTTATCAAATGGAGGAGAAGAGCAAAATCTTGATAATTGGGGCAACTGGATTCCTAGGTTACAATC TAGCAGAGACAAGCCTCAAATTTGGTCACCCCACATTTGCTCTTGTTAGAGACTCTGCATTTTCTGACCCCATCAAATCC CAAAAGCTTCAATTCCTTTCCCATGCCGGAGCCACCCTTCTCAAAGGTTCGCTTCAAGACGAAGCTAGCATTGTTGATGC TGTCAAGTTAGTAGATGTCGTCATTTGTGCTGTTTCGTCTAAACAGACTCTTGATCAAAAACTTCTCATCAGGGTTATCA AACAACTGGGCACTATCAAGGTTATGCATCACATTCAAACCTTTTTCCATTAACATTTTGTTTTTCTTAAGTTCTATGTA TTTCTGTTACTTGTCTTTTGGGTTAAATTTGTTGTTAAGTAGAAATTACAAGTGGGTTTAGTAAATGTCTAGTGGGAATG AACCTGTAAATTACAAATGCGAGTTGATGCGGCTGCAATTGCGGTTGCGATGCTGATGTGGGGTCCAGAACCCTTTAAGT TGGGCTGCAATTGCGGTTGCGGTCTGCAATTTAAAATGCTGATCCTTAAACCTTGATATTGTGATAACCATTGGTTAAAC TTGATATCAATTTCATACAAGTGTTTATTAGTGAAGCTTCTGCTCCTTGCATTATTGAATGGTTAAATATGGTCAGTAAT CAGTCGTTAGTTGTGGGATACAGAGGTTCGTCCCATCTGAATTTGGATCAGATCCTATCAAGGCTCGAGTAACTGAGCTT GATGATGGCTATAATTTCTATGCACCCAAAATTGAAATTCGGCGGCTCGTGGAGGCTGAAGGCATTCCATATACTTATAT CTCGTGCAATTTCTTCATGAAGGTTTTGCTTCCTTCTCTTGCTCAACCAGGCTTAGAAGCTCCTCCACGTGATAAGGTCA CCATATTTGGTGATGGGAATACCAAAGGTTTGCTTGATCAAGACCATTGTTACTCATTAACTGATATTGTCTTGCTTTGC TCATTCATGAATGGTTTCCTTGCAGCTGTTTTTATGAAGGAAAGTGATGTTGCTGCCTTCACTATCAGTGCAGTTGACGA CCCCCGTACGTTAAATAAAGTGGTGTACTTGAGACCCCCAGGAAATGTTTATTCTTTGAATGAGCTGGTTGAGATGTGGG AGACTAAGATTGGGAAGAAGCTTGAGAAATTGCATGTCTTAGAAGAAGAGCTGCTCACGAAAATCAACGGTATTATAGTA GTAATACATACAACATATATATCAGTTCATTATGAATTACTTGTTAAGACTTTAGGACTTAGGAGGTATGAAAAATCACA TCATATAGTACTTTAGGACTAATTGATGGATATGAAGTCTCTTCTTACATATATGTTTTCAAATTAACTTGCTCTAAAAA ATTTGTGAGAGAAAAAATTTCTCATAACATCTACCATTGCAGGAACTTCTTTCCCTTCCAACTCCAAAATGCTTTTTATA TATTCTGCTTTCATCAAGGGAGATCACACATACTTTGATATTGAGTCATCCTCTGGTGTGAATGGTACAGAACTGTATCC GCAACTGAAATATACCACTGTCAGTGAATTCTTAGACACACTAATTTAGACTTTGTTTAGGATATTGGGAAAGTGCGCAT TGCACATATTTATGTTGAAAACTTCCATTTTCTCCTTGGTATGTTTATATTTCTAAACTCAGCTCAAGAATGTTTACTGT GATGAACAAATAAAAAATGCATGTTCTTGCTGGCTTCACCATTTCGATTCCTTGCAATTTGCAAGGAGTTACTGGCACCA AATTCAGCAATAGACTCACATTGTAGTATTGTACAGTGTGGAAGGATTTCAGCTAGCAGTTTTTGTTTTCTACACTTTGA CTGCTGAGATCCATGTGTTGAACTGCACCCGCCAGCGAGTCAAATTACTGTTAAAGAAAGGAGTTCTGTCTAAGCAATCG CTGTCACGGCCTCACGGGACGTCCCAGGAAACCGCCACCAGGTGAACCTTTTTTAGATCTAGAGTTCTCCCCTCTTCTTG TTCTTTCTCACTCATACTCTAACAAGGTCAATTGGTGTTCATTGTGTGAAATTGTCTTGTGAGCTTCCGGTTGGCCTTTC ATAGTTTTCTATGGGTTTGTGTTTCCAAACTCCTATTTTGATTCATGCTTAACATTTCATGTGATGTCATTGTTCTGTTA TTGTAATTTTTTTTTTTGAAAATGTTATTATAATATGAATATGACTTGGGTTTTGACATTTTATATTGCCTAGTGTTTCT TTTTGCTTTCGGTATTGGAATATTGAAAGGTAGAGGAGAAGAAAAATTAGAGATGACAGTAAAAAAGGTTATAGTTAAAA AATACAAATCAAGTTCATGCTTTTAGAATTTTAGTACTGGTGGTCACTTTCTTTTAGTTTTGACAGACAATTTGTAAGGT TTGAATAAAGCTCTTTCAAATTTAGTGTCTTTCTAGAAAGTTAAAAGTAGGAGCCGACAAACACTTTGATTTCATTGCTT GAATATTGTGCTTGCTGTT
CDS sequence (LotjaGi3g1v0509200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGAGAAGAGCAAAATCTTGATAATTGGGGCAACTGGATTCCTAGGTTACAATCTAGCAGAGACAAGCCTCAAATT TGGTCACCCCACATTTGCTCTTGTTAGAGACTCTGCATTTTCTGACCCCATCAAATCCCAAAAGCTTCAATTCCTTTCCC ATGCCGGAGCCACCCTTCTCAAAGGTTCGCTTCAAGACGAAGCTAGCATTGTTGATGCTGTCAAGTTAGTAGATGTCGTC ATTTGTGCTGTTTCGTCTAAACAGACTCTTGATCAAAAACTTCTCATCAGGGTTATCAAACAACTGGGCACTATCAAGAG GTTCGTCCCATCTGAATTTGGATCAGATCCTATCAAGGCTCGAGTAACTGAGCTTGATGATGGCTATAATTTCTATGCAC CCAAAATTGAAATTCGGCGGCTCGTGGAGGCTGAAGGCATTCCATATACTTATATCTCGTGCAATTTCTTCATGAAGGTT TTGCTTCCTTCTCTTGCTCAACCAGGCTTAGAAGCTCCTCCACGTGATAAGGTCACCATATTTGGTGATGGGAATACCAA AGCTGTTTTTATGAAGGAAAGTGATGTTGCTGCCTTCACTATCAGTGCAGTTGACGACCCCCGTACGTTAAATAAAGTGG TGTACTTGAGACCCCCAGGAAATGTTTATTCTTTGAATGAGCTGGTTGAGATGTGGGAGACTAAGATTGGGAAGAAGCTT GAGAAATTGCATGTCTTAGAAGAAGAGCTGCTCACGAAAATCAACGGAACTTCTTTCCCTTCCAACTCCAAAATGCTTTT TATATATTCTGCTTTCATCAAGGGAGATCACACATACTTTGATATTGAGTCATCCTCTGGTGTGAATGGTACAGAACTGT ATCCGCAACTGAAATATACCACTGTCAGTGAATTCTTAGACACACTAATTTAG
Protein sequence (LotjaGi3g1v0509200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEKSKILIIGATGFLGYNLAETSLKFGHPTFALVRDSAFSDPIKSQKLQFLSHAGATLLKGSLQDEASIVDAVKLVDVV ICAVSSKQTLDQKLLIRVIKQLGTIKRFVPSEFGSDPIKARVTELDDGYNFYAPKIEIRRLVEAEGIPYTYISCNFFMKV LLPSLAQPGLEAPPRDKVTIFGDGNTKAVFMKESDVAAFTISAVDDPRTLNKVVYLRPPGNVYSLNELVEMWETKIGKKL EKLHVLEEELLTKINGTSFPSNSKMLFIYSAFIKGDHTYFDIESSSGVNGTELYPQLKYTTVSEFLDTLI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 310 | 310 | 7.0E-164 | – | |
| PANTHER | 1 | 310 | 310 | 7.0E-164 | – | |
| SUPERFAMILY | 3 | 281 | 279 | 2.2E-55 | ||
| Gene3D | 6 | 296 | 291 | 2.5E-107 | – | |
| CDD | 6 | 305 | 300 | 8.05667E-68 | – | |
| Pfam | 7 | 239 | 233 | 2.6E-70 | ||
| Gene3D | 156 | 304 | 149 | 2.5E-107 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0509200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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