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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0536900 |
| Transcript ID | LotjaGi3g1v0536900.10 |
| Related isoforms 9 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alcohol dehydrogenase-like protein; TAIR: AT5G19440.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q6K9A2|CCR1_ORYSJ Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|I3T314|I3T314_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0536900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:95355010..95358156) extracted from Lotus japonicus Gifu genome v1.2.
TTTTGTTATACAATTTTAGTATGTTTGTTTTTTGGTTGACAGCTCCGTTTGAGTCATTGGAATTCTAAATCTCTAATTCC TAGACGGTGAACGTGAAAGACACTGCGAACTGAAATTCAAACATGTCATTAGTTAGAGTTTAGCTTATAGCAGTTATTAG TTTCTAAGGCAGTGGTTGATGAGACATGGTTTTCAGATCCAGATTTCTGCAGGGAATCAAAGGTTTGTGCTAACTTATTC AGAAATGAAACACTTGAAGCTCATGCGGATGGAATATGATTTTGATGTAGTTTGCTTAAGCTGGGATTCTTGGTAATTGA ATGACATGTTGCTTCTTGCTTCTCTAAACATACATCTATGTATCTTAGCATTGCATTGGAAAATATGAACTGTATACTTG TGCATTTGCTAAGTAATCATAATTGTGAGGGATGTGGATTCCGTGGGTAGCCAGGTAGGGGATACTTATGTTCTGTTAGA TGATAGAAAGTGTTTAAACTACTTTGAAAGGCATCACTTTCCCTGAAGAAACAGAGCAGAAATAATTTCTTTCCAATAAT ATGGAAGTATATGTCAAACCTAATTGTTAGAATCAGGTAAAAGTAATCCCAGGTGTCCTAGCTCATTACAAGAAATAGTC TTGGAGTGTTATGTTAATCTAGTCACATCTCATCTGGTCCTTTTCTTTTAACCTGAAAGGCTGAAGTATCCTCACATTTC ATTTTATTTTCTGATGAGAGAGAAAGAGGCAGACATATATTATTGTTGAAAATTGTTTCTTCTACCACTTTATAGTAAGC TAAGCAGCTTTTCTAACTATGCTAAAACCCTACAGAGAATGGAAGAAAATAAATGCTCAATACCCATGACAGAAGTACTG ATAACAGTTATAGACTTTAGTTATTGAAAAGGGATTTGATGAGGGGAGTGATGCCTAATCAACCAATGTGAATTGAAAAA CTGTTTTAAAGAGAAATAGAAGTTCCTTTCTTTTGATATTCCTTGCTTGTTGCAGAGATGAGAATGTTCAGGTAGATGAG TAGATAAGTCGTTTGGGTATGTTGGAGAAGTTCTGTAGAAGGCTCAATAAGAGGAGACCTAGAAACACTATAAATATAAG TCAAGTCTTAAAGAAGGGCTTAGAATGGAACTCTTTGTGTTTACTTTTTAGATATAATTTATGATAAAGTATTATGACAT CATTTGATCCATATAACTAACCTTAATAGTAGGAAAAAAGGATTTTTGTTGCTGTATGATATTTATTAGTCACAAGATCA AGTGGAGTTCACTAAGAGTTAACCTTTCTTCTTCCTTGCTGTTTCCTATTTGTGTTTTCAGTTGTGGTACACACTTTCAA AGACTTTGGCTGAGGATGCTGCCTGGAAATTTGTAAATGAAAACAAAATTGACATGGTTGTTCTTAACCCGTCACTGGTG TCCGGACCTCTCTTACAACCAGAGGTTAATTATAGTGTTGAGCGAATTTTAAACCTAATTAATGGTAATTTTTATTTACT CGTGAAATTATGCTGCATGAGACTTCTTTTATCTGCTATGCCTGCATCTAGATTGCATGATGCGTTCCAATTCCAAGTGC TCTAATTTTTCTGTACCAAGTGAATAGAAACAGAAACAGAAAATATGGAATGAAAAATGAAATACTGTAAGAAATGGAGG GTACAATAATTCACAACTAAATTTTTAGTTAAACTTTATTCTCTAGGTTAATGGTAATTTTTATCTACTCGCGAACTGAT GCTGCATGAAACTTCTATTATCTGTTTTGCCTGCATATTTGAATGGTAATTTCAAGAATTATTTGAACTTCTTGATGCAG GTGTCCCATTTCCAAATTCGTCTATGGGATGGGTCGATGTGAAAGATGTTGCTAAAGCACATATTCAAGCATATGAGATT GCTTCCGCTAGTGGAAGATATTGTTTGGTCGAGAGAGTGGTACACTACTCTGAACTTGCTAGGATTTTAGGTGATCTGTA CCCAACAATACAAATTTCAAACAGGTAAGTTTCATTTCTATAACTTTGGCTTCTTATTTGAAAGCTCCACTCAAGCTGAA AACTCAGCATAGAAATTGATTTCCTGATATTTGTTCAATATATGCCAAAACTGAAATTTAGGGAACAAGTATAAAAATAT TCAGCACATGATATCTCAATGAATGAATGCAAAATCAACTTTTATTTAAATCATGTAGTAAAAATAGATTCCTTTAGTGC AAGCCTTAATCATTATCTTCTCCGTTAATAGTTTTAATTCCTAATAATATGTTCATCTTGTCTACTATGTTAACAGGTGT GAGGACAATGGACCTTATGTGCCTACATATCAATATTCCCAAGAAAAGGCCAAGAGTTTAGGAATCGAGTTTACTCCTTT AGAAATAAGCATCAAGGGAACTGTGGAAAGCTTTAGAGAAAAGAAAATCGTCAACTTTTAATCTGTGTTATCCTCTTGAT GAATAAATTCATGTAACTAAATTTGCATCATTGAACAACATTTTCATATGTACTGTTTGTTGACAATAAGCCTTATATTG TGAGACATAAGTGAAATCATTCACCTTAAAACTTCAAGTTACTGTAAATGTAAATGAAGGGACTGAATAATATTGATATT GAATAGATTCAACTGGGGAATATTATGAATGAGAGTCTCATTTGGTACAAGGTACACTGGAGCAACAACGGTGGCCGGAC CTCTCTTACAACCAGAGGTTAATTCTAGTGCTGAGCTAATTTTAGACCTATGTAATGGTAATTTTTATTTACTGATATTT GTTCCATATATGCCAAAACTGAAATTAAGGGAACAAGTGATAAAAATATTCAGCACATGGTATATCAATGAATAACTGCA AAACAACTTCTATTTTAATTATTTAGTGAAAATAGATTCCTTTAGAATAAGCCTTATTCATTATGTTCAATAGTTACTTG TTTTTATAATAATATGGTTCACTTTCTCTTTGACAGTTGTGTGGACAATGAGTCATATGAGCCAACATGTCAATTTTCCC AAGAAAATGCCAAGAGCTCATGAGTCGAGTTTACTCCTTTAGAAATAAGCATCAAGGAATGGAAAGTTTTAGAGAAAAGA AGATTGTCAATTTTTAATTTGTATTGT
CDS sequence (LotjaGi3g1v0536900.10) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGTTCTTAACCCGTCACTGGTGTCCGGACCTCTCTTACAACCAGAGGTTAATTATAGTGTTGAGCGAATTTTAAA CCTAATTAATGGTGTCCCATTTCCAAATTCGTCTATGGGATGGGTCGATGTGAAAGATGTTGCTAAAGCACATATTCAAG CATATGAGATTGCTTCCGCTAGTGGAAGATATTGTTTGGTCGAGAGAGTGGTACACTACTCTGAACTTGCTAGGATTTTA GGTGATCTGTACCCAACAATACAAATTTCAAACAGGTGTGAGGACAATGGACCTTATGTGCCTACATATCAATATTCCCA AGAAAAGGCCAAGAGTTTAGGAATCGAGTTTACTCCTTTAGAAATAAGCATCAAGGGAACTGTGGAAAGCTTTAGAGAAA AGAAAATCGTCAACTTTTAA
Protein sequence (LotjaGi3g1v0536900.10) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVVLNPSLVSGPLLQPEVNYSVERILNLINGVPFPNSSMGWVDVKDVAKAHIQAYEIASASGRYCLVERVVHYSELARIL GDLYPTIQISNRCEDNGPYVPTYQYSQEKAKSLGIEFTPLEISIKGTVESFREKKIVNF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 135 | 135 | 2.6E-61 | – | |
| PANTHER | 1 | 135 | 135 | 2.6E-61 | – | |
| Gene3D | 1 | 139 | 139 | 8.9E-40 | – | |
| SUPERFAMILY | 2 | 134 | 133 | 2.67E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0536900.10, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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