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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0554800 |
| Transcript ID | LotjaGi3g1v0554800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone dnaJ-like protein; TAIR: AT5G61670.1 orange protein; Swiss-Prot: sp|Q9FKF4|ORANG_ARATH Protein ORANGE, chloroplastic; TrEMBL-Plants: tr|I1LNQ9|I1LNQ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0554800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:97247498..97250093) extracted from Lotus japonicus Gifu genome v1.2.
TTGAGGATGCTCTGTCTGGGTGGTGCGGTGTCGTTTTACAGCGTGAAATGCTTTCAGCTGTACGATTCCCGTTACAGGGA CAACAGATTCCTCCATCACCATGTAAACCACACACCCAGATGGCGGCGCTTCATGGCCATCGATTCCGAATCTTCTTTTG CACCCTCATCCTCCATTGATTCTGATGCCACCGCTGCTGCTGGGTATTCATTCTTTCTTTCGTTTCATATGTAATTATTA TTATTATTATTATTATGTACCCTCTTGTCTTATTCTGTTAACTGCAGATTCTGCATCATTGAAGGCCCCGAAACGGTGCA AGATTTTGCTAAGATGGAGCTTCAAGAAATTCAGGACAACATTCGAAGTCGGAGGAACAAGATTTTTCTGCATATGGAAG AGGTAATATTCTATTCATATGGAAGAGGTAAAATCATCTTCATCTCATTTCAATTTCATTACCCTTTTGTAGGTGCGTAG GCTTAGGATACAACAAAGGATTAAAAATGCTGAACTTGGAATTTTTAATGAAGAGCAAGAAAATGAACTTCCAAATTTCC CATCATTCATTCCATTCTTGCCTCCTTTGGTAAGGAATTATCTTTATCTGCATCATGCATTTAATAACTGCTCATATTTA TCTTGTTATTGTTATTCATGAGCATCAACAATTTACTTTTCACATATATTATTTGCAGACTTCAGCAAACCTCAAGCAGT ATTATGCAACCTGTTTTTCTCTTATTGCCGGAATAATTCTTTTTGGTGGTCTCCTTGCACCCAGTGTAAGATTTTTTCAA CCAAATTTCTATTTCTTTGTTGTTTGTTCCCTTTGCAATTTTCTTACTTGGAAGTCATTGACTGTGTTTACTTTTCTTGT CAAGATGAATCTAACCCTTTGAACTGGTGCGAGAAATGCAACCGTGACAAAGATTATTTACTTCCCCATTTATGCTAGTG CTGCAACTACTTAATTTAAGTCTCATATACCCTTTACTAGGTGCACATTAAGTAAAAATTCTTTAACCCAAAAAAACTGC CCTTAACTATATTCTTGGCAATTGTAATATTGCTGCTGATGATGCATAGGAAGTATTGCAAATTGATGTGTAAGGGACTT TCCTTAACTATATTTGTGTGTTTATGTATATTTTCTTTTTAATATGGCATGCTTAACCTAAAAAAAGGAGTTACTTGCAT ATACATGGGTGAAAGTTATGCTTAATATTTAAGAGAATTGGGATTTGATTTCAACATTTCCTTCTTTTATCCATCTTTTG TGGCATTTCGTAAACATATTCCTTTTAGTTTTTTCAACTTCCGGTCTTTCCGACTCCTCTCATCTTTGTTTCATTTTTCA GTTGGAACTTAAGCTTGGAATAGGAGGCACATCTTATGCAGATTTTATTCAAAATATGCATCTGCCTATGCAGTTGAGGT AGTGCCCATTTCCTGATTCGTTGTTGCCTATTTACGTAGTTCTTTTCAGTGGGAGCAATGGAAAAATTGTCTTCTAGTCC CAAAACTTCAGCTTTTATGAATAGAAGCTGCAAGTTATTTGGCTACATATGAATATTTGGATAGTGTCAGTTCATTCGTT GCTGAATTGAATACCAGTGCATTCTATTTATTGTTCCTTATCTTAACTAAATTTTGTTGGTTATTCTAGTGAGGTTGATC CCATCGTGGCATCATTCTCTGGAGGAGCAGTTGGGGTAATCTCTGCATTAATGGTTGTTGAGATAAACAATGTGAAACAG CAAGAGCAAAAAAGATGCAAATACTGTCTTGGCACTGGTAAGATTTCAAACCTCCTCTATTATCTTCATTTTACGCGTTG AACTTCTAATTGATGGAATTGAAGGGTCTTGTCATTTTTCTTCTCATGGCATTCTTTCCCCTTTTAATGCACATTATTAC CAGTTTCTACTTCTAAGGAAGAGGTGGTGAAGCTTGTATGGGTTCTTGCATCATTCCAAACATATTCAAAGTGGAAAACT TCTACTATCTGTGATAACTTAGTTGTAAATGCAACTTGACATGCCGATTATACTTTTGTTATGTCAGGATATCTTGCATG TGCTCGCTGTTCAAGCACAGGCGCACTTGTTCTGATTGAACCAGTGTCCACAGTTAATGGTGGAGATCTGCCTCTATCAC CACCAAAAACTGAGAGATGTTCAAATTGCTCTGGATCTGGCAAGGTTCGTTATTTAGAAGTATTGACTTCATTGTGTTAG CTTTGCACTAATAATATTAGAGGACTGCCATAATCTACATAAATAGAGCTTAATGCCTTGTTCATTGTATTTGTAATAAC ATCATAATTATTAACCAATGATGATACTAATAGCCAGTAAGGCAATAACCAGACCTAGACTAAGGGTGCGTTTAGGTGTT AAGCACTTATGACCATCCAAACGCGGTCAAATTTGGTATGTGTTTGTTTACCTGCTATGTCCACAACAAGTAGCAATAGT TGTTCGTAATTGTTTTTCATGCTCAATTCCTATTGCAGGTTATGTGTCCAACATGTCTTTGTACTGGAATGGCAATGGCA AGCGAACATGATCCACGAATTGATCCTTTTGATTAA
CDS sequence (LotjaGi3g1v0554800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCTGTCTGGGTGGTGCGGTGTCGTTTTACAGCGTGAAATGCTTTCAGCTGTACGATTCCCGTTACAGGGACAACAG ATTCCTCCATCACCATGTAAACCACACACCCAGATGGCGGCGCTTCATGGCCATCGATTCCGAATCTTCTTTTGCACCCT CATCCTCCATTGATTCTGATGCCACCGCTGCTGCTGGGTATTCATTCTTTCTTTCATTCTGCATCATTGAAGGCCCCGAA ACGGTGCAAGATTTTGCTAAGATGGAGCTTCAAGAAATTCAGGACAACATTCGAAGTCGGAGGAACAAGATTTTTCTGCA TATGGAAGAGGTGCGTAGGCTTAGGATACAACAAAGGATTAAAAATGCTGAACTTGGAATTTTTAATGAAGAGCAAGAAA ATGAACTTCCAAATTTCCCATCATTCATTCCATTCTTGCCTCCTTTGACTTCAGCAAACCTCAAGCAGTATTATGCAACC TGTTTTTCTCTTATTGCCGGAATAATTCTTTTTGGTGGTCTCCTTGCACCCAGTTTGGAACTTAAGCTTGGAATAGGAGG CACATCTTATGCAGATTTTATTCAAAATATGCATCTGCCTATGCAGTTGAGTGAGGTTGATCCCATCGTGGCATCATTCT CTGGAGGAGCAGTTGGGGTAATCTCTGCATTAATGGTTGTTGAGATAAACAATGTGAAACAGCAAGAGCAAAAAAGATGC AAATACTGTCTTGGCACTGGATATCTTGCATGTGCTCGCTGTTCAAGCACAGGCGCACTTGTTCTGATTGAACCAGTGTC CACAGTTAATGGTGGAGATCTGCCTCTATCACCACCAAAAACTGAGAGATGTTCAAATTGCTCTGGATCTGGCAAGGTTA TGTGTCCAACATGTCTTTGTACTGGAATGGCAATGGCAAGCGAACATGATCCACGAATTGATCCTTTTGATTAA
Protein sequence (LotjaGi3g1v0554800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLCLGGAVSFYSVKCFQLYDSRYRDNRFLHHHVNHTPRWRRFMAIDSESSFAPSSSIDSDATAAAGYSFFLSFCIIEGPE TVQDFAKMELQEIQDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGIFNEEQENELPNFPSFIPFLPPLTSANLKQYYAT CFSLIAGIILFGGLLAPSLELKLGIGGTSYADFIQNMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINNVKQQEQKRC KYCLGTGYLACARCSSTGALVLIEPVSTVNGGDLPLSPPKTERCSNCSGSGKVMCPTCLCTGMAMASEHDPRIDPFD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 156 | 156 | - | – | |
| PANTHER | 24 | 316 | 293 | 1.7E-138 | – | |
| PANTHER | 24 | 316 | 293 | 1.7E-138 | – | |
| Phobius | 157 | 176 | 20 | - | – | |
| TMHMM | 157 | 179 | 23 | - | – | |
| Phobius | 177 | 208 | 32 | - | – | |
| TMHMM | 209 | 231 | 23 | - | – | |
| Phobius | 209 | 229 | 21 | - | – | |
| Phobius | 230 | 317 | 88 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0554800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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