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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0004700 |
| Transcript ID | LotjaGi4g1v0004700.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcineurin B-like protein; TAIR: AT4G26570.1 calcineurin B-like 3; Swiss-Prot: sp|Q75LU8|CNBL3_ORYSJ Calcineurin B-like protein 3; TrEMBL-Plants: tr|A0A1J7FMZ9|A0A1J7FMZ9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0004700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:779327..781777) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTGCAGTGCTTAGACGGATTAAAGCATTTATGCGGTGCTCTGGTAAATTGTTGTGATGCCGATTCGTCAAGGCAACG GCAACCTAGAGGTTTACAAGATCCACAACTCCTTGCAAGAGAGACAGTGTTTAGTGTAAGTGAGATTGAGGCGCTTTATG AATTGTTCAAGAACATCAGCAGTGCAGTCATTGATGATGGACTAATTAATAAGGAAGAATTTCAGTTGGCTTTGTTCAAA ACAAACAAGAAAGAGAGCTTATTTGCAGATAGGGTATCATATGCTCAGGATGGATTATATATATTCTTCTTTTCTTTACA AATAAATCAATCTATGTCCTCCTGTACATCATTTTCTTCTGTTTCAATTTTTTAGGTGTTCGACTTGTTTGACACAAAGC ATAATGGGATACTTGATTTTGAAGAGTTTGCACGTGCTCTCTCTGTCTTTCATCCCAATGCACCAATTGATGATAAGATT CACTGTAACAACTTTTCTCTAGTTTTTGAGTTATCTCCCTTGCTGCATTGTTATTCATAGTAATGCACATGCTTGTTCTT TCTTGCAGTTTCATTCCAATTGTATGATCTCAAACAGCAAGGGTTTATTCAAAGACAGGAGGTAATAATCTTTAATATGC TATTTCAATAAATGAACTTTTGTCCACTCACCAAATTCTATAGTGTTTAGGTCAGACAACCAATATGTAATACAATTAAT ATTGGGAACTTGAATCAGCTTTAACTCACATTTTTCTGAAGCCAACTACAAATTGCATTTTCAATTCTTTCTTGGTCCAA CGCCGTGGATTGAAATTTGAAAATCAGTCTATCTCATGAGTTTGCCAAGGCTGATCAGGCCATCTTTTTTCTCAAGTCCA CAAGAGACATGGATTGCCACTGGGGAAAGAAAAAGTTGAATTACAGATGATAATAAGTTTAGGAAATATACAACTTATTG TTTTTGGTTATATTTAGGTAGTGGCCTAATTTTGGGACAGAATTTGACTATGTAATTTTGTGGGCTACAGAGAACTGTGA ACAACCTATATGGAGATGGTAGTATTTCACCACTCAGTAGGAAAAATAGGTTGAATATGTTTCAAGTATCAGAGATTCAA AGCCTATACCCGAGTCAAAATGACCAATATTTTTATCTTCCAGCTTTAACATCGGAAGTTATGCATTCTCAAAAACTACA AACAACTTTAAACGTGATATCTTCCTAGTATTTAACTGCAAATAAATTTAAAATCACTTTATAATCTCAGTGAAACTTTT TTGTTTTTCTTTCTTTCCTTGGAATCTTTTTGATCCTCTGATCTGGCATGTCTTTGGTATTACCATGTATTTGATACGCA TCGGTGATCGTTATTTTTATGTATAGGTGAAACAAATGGTAGTCGCCACTCTAGCTGAATCTGGTATGAATCTTTCGGAT GATGTGATCGAAAGTATTATTGACAAGGTGCTTCATTTACTCGATAACTTCAGTTCCATCCTAAATCTTATGCTCATTAT TATTATGTGATGCATTTTATAAGCTCTTCTTTCTCTTTGCTTTTTATCTTTATTTTATTTTAATATTTTATTTTGTCAAT GTAAGTATAAATTTATTAACTATGTTTTTCACTCTTCTTAATGTCTCGAGAAAATCTATTAAGCATATAAAATTATAAAT ATATGTAAGATGTTCATAGGATGGAAACCAGTAGTTTAATTTTCCCATTTATGATTGATTTTCTGTCATTTCCCAAATTT TAAGTCTATATTCTTTTGATGGTGCGTGTTTGTCCATCATTGTATCTCATATTAATTAGCTAACATGGACTGTTAGTGAG AGTTAGCCAGTTAGCTACAATGATGAGAAAATAGGCATGTCTGCCTATAAATGAGAGCAGGAAAGGAGGGGTTGAAAGGG ACAGGTATCTAGTCATTTAAGTGAAAATTTGGGCCTTTGGGTAGGGAGGTTTGTAGACCCTGAAGTTTTTCAGGGTTGTA ATCAAGGGAGATTTTCCTTATTCTATTTCTATGTAATAAAATACAAGTTCCTTTCACATTATTAGTGGGACACTTATGTG TACTCTATCTATGTTTTCCTCGTATTTGGACCGAAATTTCCACTGAAATTCTCTGCAAAATAAAGCAAACCTTCTTTCAG CCTTATTCTTGTGAACTTCTTAAAGTACTTTGGTTTTATGTATGTTGAGTTGAATATAAATTATTCTTGTGCTATCATAA TCTTCTCTTAAGATCTGTCACTAACTGCTTTTAAGCTATTTAGACATTTGAGGAAGCTGATACAAACATGATGGGAAGAT TGACAAGGAAGAATGGCGAAACCTTGTCTTACGACATCCATCCCTTCTGAAAAATATGACTTTACAGTATCTGAAGTGAG TCTCTTCCTGTTACTAACCGCTATTTTGGGTTTTGAAATTCTTTCGAGTGA
CDS sequence (LotjaGi4g1v0004700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGCAGTGCTTAGACGGATTAAAGCATTTATGCGGTGCTCTGGTAAATTGTTGTGATGCCGATTCGTCAAGGCAACG GCAACCTAGAGGTTTACAAGATCCACAACTCCTTGCAAGAGAGACAGTGTTTAGTGTAAGTGAGATTGAGGCGCTTTATG AATTGTTCAAGAACATCAGCAGTGCAGTCATTGATGATGGACTAATTAATAAGGAAGAATTTCAGTTGGCTTTGTTCAAA ACAAACAAGAAAGAGAGCTTATTTGCAGATAGGGTGTTCGACTTGTTTGACACAAAGCATAATGGGATACTTGATTTTGA AGAGTTTGCACGTGCTCTCTCTGTCTTTCATCCCAATGCACCAATTGATGATAAGATTCACTTTTCATTCCAATTGTATG ATCTCAAACAGCAAGGGTTTATTCAAAGACAGGAGGTGAAACAAATGGTAGTCGCCACTCTAGCTGAATCTGGTATGAAT CTTTCGGATGATGTGATCGAAAGTATTATTGACAAGACATTTGAGGAAGCTGATACAAACATGATGGGAAGATTGACAAG GAAGAATGGCGAAACCTTGTCTTACGACATCCATCCCTTCTGA
Protein sequence (LotjaGi4g1v0004700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVQCLDGLKHLCGALVNCCDADSSRQRQPRGLQDPQLLARETVFSVSEIEALYELFKNISSAVIDDGLINKEEFQLALFK TNKKESLFADRVFDLFDTKHNGILDFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIQRQEVKQMVVATLAESGMN LSDDVIESIIDKTFEEADTNMMGRLTRKNGETLSYDIHPF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 190 | 190 | 4.0E-110 | – | |
| PANTHER | 1 | 190 | 190 | 4.0E-110 | – | |
| Gene3D | 34 | 194 | 161 | 5.5E-51 | – | |
| SUPERFAMILY | 35 | 187 | 153 | 3.72E-38 | ||
| ProSiteProfiles | 84 | 119 | 36 | 12.644 | ||
| SMART | 88 | 116 | 29 | 0.6 | ||
| Pfam | 90 | 111 | 22 | 0.0022 | ||
| PRINTS | 92 | 113 | 22 | 3.0E-5 | – | |
| ProSiteProfiles | 121 | 156 | 36 | 9.66 | ||
| SMART | 125 | 153 | 29 | 24.0 | ||
| PRINTS | 139 | 157 | 19 | 3.0E-5 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi4g1v0004700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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