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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0010600 |
| Transcript ID | LotjaGi4g1v0010600.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TAIR: AT1G12000.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TrEMBL-Plants: tr|G7JKF2|G7JKF2_MEDTR Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Found in the gene: LotjaGi4g1v0010600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:1350090..1350783) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTCATTCAAATGGTTGAAACGGAGTTGGAGAAGAGAAAGCAAGAAGGCACATATAAAGCTCAATTTAAAGGGCAGGC TCACTTTTTCGGGTACTTCATCTAAGTTAGATCTTCTTGGAGTTGCAAGGTTTGATATATAAGTTGCTATGAAACAAAAA AAGAAAGTTTCTATGGACCTGCTTTATGATTCACCTTTAACTTGGATTTAAAATTATTTTTTTCCATACATATCTACTCA TGGTCTTTCTATATTTGACTTCAATGATTAGAGTTTGTTGTTACCCTCACTCATTGAAAATATGCAGGTATGAAGGGAGA TGTGGTTTGCCAACTAACTTTGATTCTACTTACTGCTATGCATTGGGTTATGGTGCTGGAGCCCTCCTTCAATTCGGGAA GACTGGACTAATATCATCAGTTTGTGCTTCTCCCGACGCTCTTCTCATAATCTTCTAATTATCTAATAAAATATATCTTA TAGATTGGTTGATGATTGATTGTGCTTGATATTTGTTTAGTATTGCTGTGGTGATCAACTCAATTATTGGATTTGCTATA TTTTTTTCAGGTTGGGAATTTGTGCGCTCCAGTAGAAGAATGGACTGTTGGTGGAACTGCACTAACATCACTAATGGACG TGGAGAGGAGACATGGTACACATTGTGATCTATGAGAGTGTTTGCTTACCCTGA
CDS sequence (LotjaGi4g1v0010600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCATTCAAATGGTTGAAACGGAGTTGGAGAAGAGAAAGCAAGAAGGCACATATAAAGCTCAATTTAAAGGGCAGGC TCACTTTTTCGGGTATGAAGGGAGATGTGGTTTGCCAACTAACTTTGATTCTACTTACTGCTATGCATTGGGTTATGGTG CTGGAGCCCTCCTTCAATTCGGGAAGACTGGACTAATATCATCAGTTGGGAATTTGTGCGCTCCAGTAGAAGAATGGACT GTTGGTGGAACTGCACTAACATCACTAATGGACGTGGAGAGGAGACATGGTACACATTGTGATCTATGA
Protein sequence (LotjaGi4g1v0010600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFIQMVETELEKRKQEGTYKAQFKGQAHFFGYEGRCGLPTNFDSTYCYALGYGAGALLQFGKTGLISSVGNLCAPVEEWT VGGTALTSLMDVERRHGTHCDL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 37 | 37 | 8.0E-39 | – | |
| PANTHER | 1 | 99 | 99 | 2.3E-69 | – | |
| PANTHER | 1 | 99 | 99 | 2.3E-69 | – | |
| SUPERFAMILY | 2 | 99 | 98 | 3.4E-24 | ||
| Gene3D | 38 | 98 | 61 | 8.0E-39 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | 6-phosphofructokinase activity | Catalysis of the reaction: ATP + D-fructose-6-phosphate = ADP + D-fructose 1,6-bisphosphate. | ||
| Biological process | Glycolytic process | The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules. |
Expression pattern of LotjaGi4g1v0010600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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